BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015219
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein A...    67   2e-09
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...    61   1e-07
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    61   2e-07
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    61   2e-07
ref|XP_002449211.1| hypothetical protein SORBIDRAFT_05g006430 [S...    60   3e-07

>ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 776

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
 Frame = -1

Query: 510 WTQPHSNFFKLNIDGSFVKG-KQSSYGYVIRNSKGDFIAAGLGH-GWDLTAEDAESQGML 337
           W+ P +N+ KLN+D SF++  +++ +G V+R+S G  +A+  G  G   +A +AE++   
Sbjct: 431 WSPPEANWMKLNVDASFIEQTREAWWGAVLRSSDGAVVASAWGAIGPCGSATEAEAKAAR 490

Query: 336 QAILWSRKFRLKHLEVEIDCKNVSTFLEKGQAD-----------ISYLSLLDKFSCTWVS 190
             I   R     +L +E DCK V   L    AD            S L   D + C+WV 
Sbjct: 491 NGIAALRHAASANLHLESDCKAVIASLLNPSADRTGVCFVIREVCSSLGSFDLYKCSWVC 550

Query: 189 RTCNKTAHTIAAFGKRHSNSVEWIL 115
           R  N  AH +A F +   +S   +L
Sbjct: 551 RAGNGLAHALAQFARSSGSSSSEVL 575


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
 Frame = -1

Query: 525 PKHAHWTQPHSNFFKLNIDGSF-VKGKQSSYGYVIRNSKGDFIAAGLGHGWDL-TAEDAE 352
           P +  W  P + F+K+N DGS+  K    S+G +IR   G F+AAG G    + +A  AE
Sbjct: 302 PMNLKWQPPPAGFYKINCDGSYRAKSGLGSWGCIIRGHDGGFLAAGAGALTGISSALHAE 361

Query: 351 SQGMLQAILWSRKFRLKHLEVEIDCKNVSTFLEKGQADISYLSLLDK---------FSCT 199
           S   ++ +  +    ++++ +E D   + T L   + D+S L ++ K         F+C 
Sbjct: 362 SVACMKGLELAVFLGMQNVMIETDAAILKTALTSQEYDLSALGVVFKEIRSRMFSEFACC 421

Query: 198 WVS---RTCNKTAHTIAAFG 148
            VS   RTCN  A  +AA G
Sbjct: 422 IVSKCQRTCNLVADCLAAHG 441


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
 Frame = -1

Query: 516 AHWTQPHSNFFKLNIDGSFVKG-KQSSYGYVIRNSKGDFIAAGLGHGWDLT-AEDAESQG 343
           A W +P  NF K+N DG++    KQ  +G+VIR+  G  + AG G    L  A  AE   
Sbjct: 396 AVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVA 455

Query: 342 MLQAILWSRKFRLKHLEVEIDCKNVSTFLEKGQADIS------------YLSLLDKFSCT 199
              AI  + +  +  +E+E D   +   ++    ++S             LS    FS +
Sbjct: 456 CAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVS 515

Query: 198 WVSRTCNKTAHTIAAFGKRHSNSVEW 121
           +  R+CNK AH +AA+G        W
Sbjct: 516 YSPRSCNKVAHELAAYGCNLQTVSSW 541


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
 Frame = -1

Query: 516  AHWTQPHSNFFKLNIDGSFVKG-KQSSYGYVIRNSKGDFIAAGLGHGWDLT-AEDAESQG 343
            A W +P  NF K+N DG++    KQ  +G+VIR+  G  + AG G    L  A  AE   
Sbjct: 1429 AVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVA 1488

Query: 342  MLQAILWSRKFRLKHLEVEIDCKNVSTFLEKGQADIS------------YLSLLDKFSCT 199
               AI  + +  +  +E+E D   +   ++    ++S             LS    FS +
Sbjct: 1489 CAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVS 1548

Query: 198  WVSRTCNKTAHTIAAFGKRHSNSVEW 121
            +  R+CNK AH +AA+G        W
Sbjct: 1549 YSPRSCNKVAHELAAYGCNLQTVSSW 1574


>ref|XP_002449211.1| hypothetical protein SORBIDRAFT_05g006430 [Sorghum bicolor]
           gi|241935054|gb|EES08199.1| hypothetical protein
           SORBIDRAFT_05g006430 [Sorghum bicolor]
          Length = 375

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
 Frame = -1

Query: 510 WTQPHSNFFKLNIDGSFVK-GKQSSYGYVIRNSKGDFIAAGLGH-GWDLTAEDAESQGML 337
           W +P S   K+N DG+F    K   +GYVIR+ +G  I  GLG   +   +   E    L
Sbjct: 210 WEKPPSGLLKVNADGAFRDVDKTGGWGYVIRDEEGAVIQTGLGRIMYAGNSLHTELMACL 269

Query: 336 QAILWSRKFRLKHLEVEIDCKNVSTFLEKGQADISYLS--------LLDKFSCT----WV 193
           +    +      H  +E D ++V   ++     ++ +         LL + S +     V
Sbjct: 270 EGAKAALSLGASHFILETDAQHVVWAMQGDDFRLAMVGGIVHELKLLLAESSISVRISHV 329

Query: 192 SRTCNKTAHTIAAFGKRHSNSVEWILLNLPV*LRDIL*KDRVSV 61
            R CNK AH +A+ GK  S+S   +L  +P+ +RD++  D   V
Sbjct: 330 PRDCNKVAHELASLGKSRSDSAPLVLAGVPLCIRDLVSGDLADV 373