BLASTX nr result

ID: Coptis21_contig00015210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015210
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   201   2e-49
ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|2...   195   1e-47
gb|AFK40201.1| unknown [Lotus japonicus]                              194   2e-47
ref|XP_002529338.1| conserved hypothetical protein [Ricinus comm...   193   4e-47
ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|2...   193   4e-47

>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  201 bits (511), Expect = 2e-49
 Identities = 105/164 (64%), Positives = 122/164 (74%), Gaps = 13/164 (7%)
 Frame = -3

Query: 800 MDEVLTASDASTTIRSSNQSQPSILPYNXXXXXXXXXXXXXXXXXXFTTWYKEKRWDSRR 621
           MDEV+TA+DAS+ I  S  S  SI+P N                  FTTWYKEKRWDSRR
Sbjct: 1   MDEVITAADASS-IAGSTSSGSSIIPNNLPLLSAFLSFALAQFLKLFTTWYKEKRWDSRR 59

Query: 620 IFGSGGMPSSHSATVSALAVAIGFQDGTG-------------VMYDASGVRLHAGRQAEL 480
           + GSGGMPSSHSATV+ALAVAIGFQ+GTG             VMYDASGVRLHAGRQAEL
Sbjct: 60  MLGSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVVMYDASGVRLHAGRQAEL 119

Query: 479 LNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYV 348
           LNQIVCE PP+HP+S+VRPLR+ LGHTPLQV+AG++LGC+V+Y+
Sbjct: 120 LNQIVCELPPDHPVSNVRPLRDSLGHTPLQVVAGSVLGCVVAYL 163


>ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  195 bits (496), Expect = 1e-47
 Identities = 100/164 (60%), Positives = 121/164 (73%), Gaps = 13/164 (7%)
 Frame = -3

Query: 800 MDEVLTASDASTTIRSSNQSQPSILPYNXXXXXXXXXXXXXXXXXXFTTWYKEKRWDSRR 621
           MDEV+TA+DAS+  RS+  S P+ LP N                  FTTW+KEKRWD+RR
Sbjct: 1   MDEVMTAADASSRYRSAT-SPPASLPSNIPLLSAFLAFSLAQFLKLFTTWFKEKRWDARR 59

Query: 620 IFGSGGMPSSHSATVSALAVAIGFQDGTG-------------VMYDASGVRLHAGRQAEL 480
           + GSGGMPSSHSATV+ALA AIG Q+GTG             VMYDA+GVRLHAGRQAEL
Sbjct: 60  MLGSGGMPSSHSATVTALATAIGLQEGTGAPAFAVALVLACVVMYDATGVRLHAGRQAEL 119

Query: 479 LNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYV 348
           LNQIVCE PPEHP+S+VRPLR+ LGHTPLQV+AGA+LGC+++++
Sbjct: 120 LNQIVCELPPEHPVSNVRPLRDSLGHTPLQVVAGAVLGCIIAFL 163


>gb|AFK40201.1| unknown [Lotus japonicus]
          Length = 169

 Score =  194 bits (493), Expect = 2e-47
 Identities = 98/164 (59%), Positives = 117/164 (71%), Gaps = 13/164 (7%)
 Frame = -3

Query: 800 MDEVLTASDASTTIRSSNQSQPSILPYNXXXXXXXXXXXXXXXXXXFTTWYKEKRWDSRR 621
           MDEV+T +D + + RS+  S  S LP+N                  FTTWYKEKRWDS+R
Sbjct: 1   MDEVVTMADVTASTRSAPSSSSSTLPFNAPLLSAFLAFAIAQILKIFTTWYKEKRWDSKR 60

Query: 620 IFGSGGMPSSHSATVSALAVAIGFQDGTG-------------VMYDASGVRLHAGRQAEL 480
           +  SGGMPSSHSATVSALA+AIG Q+G G             VMYDASGVRLHAGRQAEL
Sbjct: 61  MLDSGGMPSSHSATVSALALAIGLQEGAGSPAFAIAVVLSCIVMYDASGVRLHAGRQAEL 120

Query: 479 LNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYV 348
           LNQIVCE PPEHPLS+VRPLR+ LGHTPLQV+AG +LGC+++++
Sbjct: 121 LNQIVCELPPEHPLSTVRPLRDSLGHTPLQVVAGGLLGCIIAFL 164


>ref|XP_002529338.1| conserved hypothetical protein [Ricinus communis]
           gi|223531209|gb|EEF33055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  193 bits (491), Expect = 4e-47
 Identities = 103/168 (61%), Positives = 120/168 (71%), Gaps = 17/168 (10%)
 Frame = -3

Query: 800 MDEVLTASDA----STTIRSSNQSQPSILPYNXXXXXXXXXXXXXXXXXXFTTWYKEKRW 633
           MDEV+T +DA     TT  SS+ S  S LP N                  FT WYKE+RW
Sbjct: 1   MDEVMTVADARSAGQTTSSSSSASSFSGLPSNLPLLSAFLSCALAQFLKIFTNWYKERRW 60

Query: 632 DSRRIFGSGGMPSSHSATVSALAVAIGFQDGTG-------------VMYDASGVRLHAGR 492
           DS+++F SGGMPSSHSATV+ALA+AIG Q+G G             VMYDA+GVRLHAGR
Sbjct: 61  DSKKMFDSGGMPSSHSATVTALAMAIGLQEGPGSPAFAIAFVLACVVMYDATGVRLHAGR 120

Query: 491 QAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYV 348
           QAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQV+AG++LGC+V+Y+
Sbjct: 121 QAELLNQIVCEFPPEHPLSSVRPLRELLGHTPLQVVAGSLLGCIVAYL 168


>ref|XP_002321138.1| predicted protein [Populus trichocarpa] gi|222861911|gb|EEE99453.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  193 bits (491), Expect = 4e-47
 Identities = 101/155 (65%), Positives = 114/155 (73%), Gaps = 14/155 (9%)
 Frame = -3

Query: 770 STTIRSSNQSQPS-ILPYNXXXXXXXXXXXXXXXXXXFTTWYKEKRWDSRRIFGSGGMPS 594
           +T+  SS+ S P+ +LPYN                  FTTWYKEKRWDS+R+  SGGMPS
Sbjct: 20  TTSSSSSSSSSPAPLLPYNLPLLSALLACALAQFLKLFTTWYKEKRWDSKRMLDSGGMPS 79

Query: 593 SHSATVSALAVAIGFQDGTG-------------VMYDASGVRLHAGRQAELLNQIVCEFP 453
           SHSATV+ALAVA+G Q+GTG             VMYDASGVRLHAGRQAELLNQIVCEFP
Sbjct: 80  SHSATVTALAVAVGLQEGTGSPAFAIVVVLACVVMYDASGVRLHAGRQAELLNQIVCEFP 139

Query: 452 PEHPLSSVRPLRELLGHTPLQVIAGAILGCLVSYV 348
           PEHPLSS RPLRELLGHTPLQV+AGAILGC+V Y+
Sbjct: 140 PEHPLSSSRPLRELLGHTPLQVVAGAILGCIVGYL 174


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