BLASTX nr result

ID: Coptis21_contig00015175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015175
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251...    91   8e-17
ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana] gi|4...    91   8e-17
gb|AAM64721.1| unknown [Arabidopsis thaliana]                          91   8e-17
ref|XP_002527246.1| conserved hypothetical protein [Ricinus comm...    89   3e-16

>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/46 (97%), Positives = 45/46 (97%)
 Frame = -2

Query: 421 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILTSSRG 284
           IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSIL SSRG
Sbjct: 202 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNSSRG 247


>ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251416 [Vitis vinifera]
           gi|296089606|emb|CBI39425.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -2

Query: 421 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILTSSRG 284
           IRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSIL +SRG
Sbjct: 186 IRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 231


>ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana]
           gi|4455358|emb|CAB36768.1| putative protein [Arabidopsis
           thaliana] gi|7269653|emb|CAB79601.1| putative protein
           [Arabidopsis thaliana] gi|110741138|dbj|BAE98662.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332660017|gb|AEE85417.1| YGGT family protein
           [Arabidopsis thaliana]
          Length = 218

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -2

Query: 421 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILTSSRG 284
           IRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSIL +SRG
Sbjct: 173 IRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 218


>gb|AAM64721.1| unknown [Arabidopsis thaliana]
          Length = 218

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -2

Query: 421 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILTSSRG 284
           IRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSIL +SRG
Sbjct: 173 IRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 218


>ref|XP_002527246.1| conserved hypothetical protein [Ricinus communis]
           gi|223533339|gb|EEF35090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = -2

Query: 421 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILTSSRGGGY 275
           IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLG LGSIL+SS G GY
Sbjct: 179 IRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGMLGSILSSS-GAGY 226


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