BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015172
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530313.1| pentatricopeptide repeat-containing protein,...   300   5e-79
emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]   293   4e-77
ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi...   290   5e-76
ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [...   279   9e-73
emb|CAB83319.1| putative protein [Arabidopsis thaliana]               279   9e-73

>ref|XP_002530313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530169|gb|EEF32080.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 328

 Score =  300 bits (767), Expect = 5e-79
 Identities = 164/277 (59%), Positives = 199/277 (71%), Gaps = 28/277 (10%)
 Frame = -2

Query: 970 NPSFPPPRFPTLT------------RLFSSRP--RRNTTKTITF-------------SDT 872
           +PS  PP+ P +             R F S+P   + TTKTIT              SD 
Sbjct: 53  SPSRLPPQQPPVLNALAYLQHQNQLRSFCSKPTSEKETTKTITNTKVNFSLSDSDSDSDL 112

Query: 871 DDEDEKNNITKEMEKTKLPPPYDPFNKKPVIEEPNDPKDLQEIFHKMRTEGLINNAIKMF 692
           D ED KN   KE++KTKLPPPYDPFNKKPVIEEP+DP +LQ IFHKMR+EGL+N+A+KMF
Sbjct: 113 DSEDSKN---KEIDKTKLPPPYDPFNKKPVIEEPDDPNNLQLIFHKMRSEGLLNSAVKMF 169

Query: 691 DALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGHSKEAVKVFLRMLSSGV 512
           DALSKDGLTHEA+ELF  IK+KG+MPDVVA+TAVIEAY+NAGG SKEA+K F+RML++GV
Sbjct: 170 DALSKDGLTHEALELFSQIKNKGHMPDVVAYTAVIEAYANAGGQSKEALKAFMRMLAAGV 229

Query: 511 KPNAYTYSVLIKGLAKDGNVKDAKKYVLEMMDKGIKGPNVGTYTCVFEAFARXXXXXXXX 332
            PNAYTY+VLIKGLA DG + DA KYVLEMM KG++ PN GTY+ VFEA+A+        
Sbjct: 230 APNAYTYTVLIKGLAGDGKLADANKYVLEMMGKGMR-PNAGTYSTVFEAYAKAQKVDEAK 288

Query: 331 XXXXVMKSKGFTPDENAVRDHL-SKRGQAFSSVMNML 224
                MK KGF P+E AVR+ L +KRGQ F +V+N+L
Sbjct: 289 LLLQQMKGKGFVPEEKAVREVLNNKRGQVFRTVINIL 325


>emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]
          Length = 347

 Score =  293 bits (751), Expect = 4e-77
 Identities = 153/233 (65%), Positives = 184/233 (78%), Gaps = 5/233 (2%)
 Frame = -2

Query: 907 RNTTKTITFSDTDDEDEKNNITK----EMEKTKLPPPYDPFNKKPVIEEPNDPKDLQEIF 740
           R++TK I FS +D + +   + K    E++K+KLPPPYDPF+KKP IEEP DPKDLQ+IF
Sbjct: 115 RSSTK-INFSPSDSDSDSETMIKKTKHEIDKSKLPPPYDPFSKKPAIEEPKDPKDLQDIF 173

Query: 739 HKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGH 560
           HKMRTEGL+ NA+KMFDALSKDGLTHEAMELF  IKD G+MPDVVAHTAVIEAY+NA G 
Sbjct: 174 HKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANA-GQ 232

Query: 559 SKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNVKDAKKYVLEMMDKGIKGPNVGTYT 380
           SKEAVKV++RML+SGV PNAYTYSVLIKGLA D  + +AKKYVLEMM KG++ PN GTYT
Sbjct: 233 SKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMR-PNAGTYT 291

Query: 379 CVFEAFARXXXXXXXXXXXXVMKSKGFTPDENAVRDHL-SKRGQAFSSVMNML 224
            +FE FA+             MK+KGFTPDE AVR+ L ++RGQ F S+M++L
Sbjct: 292 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDIL 344


>ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 307

 Score =  290 bits (741), Expect = 5e-76
 Identities = 152/233 (65%), Positives = 183/233 (78%), Gaps = 5/233 (2%)
 Frame = -2

Query: 907 RNTTKTITFSDTDDEDEKNNITK----EMEKTKLPPPYDPFNKKPVIEEPNDPKDLQEIF 740
           R++TK I FS +D + +   + K    E++K+KLPPPYDPF+KK  IEEP DPKDLQ+IF
Sbjct: 75  RSSTK-INFSPSDSDSDSETMIKKTKHEIDKSKLPPPYDPFSKKLAIEEPKDPKDLQDIF 133

Query: 739 HKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGH 560
           HKMRTEGL+ NA+KMFDALSKDGLTHEAMELF  IKD G+MPDVVAHTAVIEAY+NA G 
Sbjct: 134 HKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANA-GQ 192

Query: 559 SKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNVKDAKKYVLEMMDKGIKGPNVGTYT 380
           SKEAVKV++RML+SGV PNAYTYSVLIKGLA D  + +AKKYVLEMM KG++ PN GTYT
Sbjct: 193 SKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMR-PNAGTYT 251

Query: 379 CVFEAFARXXXXXXXXXXXXVMKSKGFTPDENAVRDHL-SKRGQAFSSVMNML 224
            +FE FA+             MK+KGFTPDE AVR+ L ++RGQ F S+M++L
Sbjct: 252 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDIL 304


>ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana]
           gi|332003244|gb|AED90627.1| nucleobase:cation
           symporter-1, NCS1 family [Arabidopsis thaliana]
          Length = 363

 Score =  279 bits (713), Expect = 9e-73
 Identities = 150/242 (61%), Positives = 175/242 (72%), Gaps = 6/242 (2%)
 Frame = -2

Query: 931 RLFSSRPRRNTTKTITFSDTDDEDEKNNITKEMEKTKL----PPPYDPFNKKPVIEEPND 764
           R FSS  +R  TK + FS +DD+ ++   T+  E +K     PPPYDPF+KKP IEEP D
Sbjct: 122 RQFSSETKRVNTK-VNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPED 180

Query: 763 PKDLQEIFHKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIE 584
           PK+LQEIFHKMRTEG  N A+KMFDALSKDG THEA+ELF  IKDK  MPDVVAHTA++E
Sbjct: 181 PKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240

Query: 583 AYSNAGGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNV-KDAKKYVLEMMDKGI 407
           AY+NA G +KE +KVF+RML+SGV PNAYTYSVLIKGLA DG   KDAKKY+LEMM  G+
Sbjct: 241 AYANA-GQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGM 299

Query: 406 KGPNVGTYTCVFEAFARXXXXXXXXXXXXVMKSKGFTPDENAVRDHLS-KRGQAFSSVMN 230
             PN  TYT VFEAF R             MK KGF PDE AVR+ L  KRGQ F +V+N
Sbjct: 300 -SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVIN 358

Query: 229 ML 224
           +L
Sbjct: 359 LL 360


>emb|CAB83319.1| putative protein [Arabidopsis thaliana]
          Length = 482

 Score =  279 bits (713), Expect = 9e-73
 Identities = 150/242 (61%), Positives = 175/242 (72%), Gaps = 6/242 (2%)
 Frame = -2

Query: 931 RLFSSRPRRNTTKTITFSDTDDEDEKNNITKEMEKTKL----PPPYDPFNKKPVIEEPND 764
           R FSS  +R  TK + FS +DD+ ++   T+  E +K     PPPYDPF+KKP IEEP D
Sbjct: 103 RQFSSETKRVNTK-VNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPED 161

Query: 763 PKDLQEIFHKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIE 584
           PK+LQEIFHKMRTEG  N A+KMFDALSKDG THEA+ELF  IKDK  MPDVVAHTA++E
Sbjct: 162 PKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 221

Query: 583 AYSNAGGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNV-KDAKKYVLEMMDKGI 407
           AY+NA G +KE +KVF+RML+SGV PNAYTYSVLIKGLA DG   KDAKKY+LEMM  G+
Sbjct: 222 AYANA-GQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGM 280

Query: 406 KGPNVGTYTCVFEAFARXXXXXXXXXXXXVMKSKGFTPDENAVRDHLS-KRGQAFSSVMN 230
             PN  TYT VFEAF R             MK KGF PDE AVR+ L  KRGQ F +V+N
Sbjct: 281 -SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVIN 339

Query: 229 ML 224
           +L
Sbjct: 340 LL 341