BLASTX nr result

ID: Coptis21_contig00015150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015150
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation...    70   4e-10
emb|CBI30501.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation...    70   4e-10
emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]    70   4e-10
emb|CBI16056.3| unnamed protein product [Vitis vinifera]               67   6e-09

>ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 2 [Vitis vinifera]
          Length = 286

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
 Frame = +2

Query: 254 LICPYCGESADPHDSPSCPLGDLSPRPL----------PEEGPGCTLITVVP-------- 379
           ++C  CG+  D H +  CP  DL+P+P           P      T    VP        
Sbjct: 133 MVCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGAD 191

Query: 380 ---SLNIKENAVNNSIILRNLPLNYSDADLRQVCSTFGPLTKVHAVIDDETDLCLGEGYA 550
                +++     N++ + NL  +  +ADLR++ S FG LT+V+  ID +T L  G GY 
Sbjct: 192 RSSGTDMRRRNEENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYV 251

Query: 551 SFESIDDAERAIQGLKQNYGYD 616
           +F + +DAERAI  L   YGYD
Sbjct: 252 NFVNREDAERAISKL-NGYGYD 272


>emb|CBI30501.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
 Frame = +2

Query: 254 LICPYCGESADPHDSPSCPLGDLSPRPL----------PEEGPGCTLITVVP-------- 379
           ++C  CG+  D H +  CP  DL+P+P           P      T    VP        
Sbjct: 41  MVCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGAD 99

Query: 380 ---SLNIKENAVNNSIILRNLPLNYSDADLRQVCSTFGPLTKVHAVIDDETDLCLGEGYA 550
                +++     N++ + NL  +  +ADLR++ S FG LT+V+  ID +T L  G GY 
Sbjct: 100 RSSGTDMRRRNEENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYV 159

Query: 551 SFESIDDAERAIQGLKQNYGYD 616
           +F + +DAERAI  L   YGYD
Sbjct: 160 NFVNREDAERAISKL-NGYGYD 180


>ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 1 [Vitis vinifera]
          Length = 293

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
 Frame = +2

Query: 254 LICPYCGESADPHDSPSCPLGDLSPRPL----------PEEGPGCTLITVVP-------- 379
           ++C  CG+  D H +  CP  DL+P+P           P      T    VP        
Sbjct: 140 MVCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGAD 198

Query: 380 ---SLNIKENAVNNSIILRNLPLNYSDADLRQVCSTFGPLTKVHAVIDDETDLCLGEGYA 550
                +++     N++ + NL  +  +ADLR++ S FG LT+V+  ID +T L  G GY 
Sbjct: 199 RSSGTDMRRRNEENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYV 258

Query: 551 SFESIDDAERAIQGLKQNYGYD 616
           +F + +DAERAI  L   YGYD
Sbjct: 259 NFVNREDAERAISKL-NGYGYD 279


>emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
          Length = 306

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
 Frame = +2

Query: 254 LICPYCGESADPHDSPSCPLGDLSPRPL----------PEEGPGCTLITVVP-------- 379
           ++C  CG+  D H +  CP  DL+P+P           P      T    VP        
Sbjct: 153 MVCRTCGKKGD-HWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGAD 211

Query: 380 ---SLNIKENAVNNSIILRNLPLNYSDADLRQVCSTFGPLTKVHAVIDDETDLCLGEGYA 550
                +++     N++ + NL  +  +ADLR++ S FG LT+V+  ID +T L  G GY 
Sbjct: 212 RSSGTDMRRRNEENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYV 271

Query: 551 SFESIDDAERAIQGLKQNYGYD 616
           +F + +DAERAI  L   YGYD
Sbjct: 272 NFVNREDAERAISKL-NGYGYD 292


>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
 Frame = +2

Query: 254 LICPYCGESADPHDSPSCPLGDLSP-------RPLPEEGP----GCTLITVVP------- 379
           ++C  CG+  D H +  CP  DL+P       +P   EG     G +  T VP       
Sbjct: 40  MVCRTCGKKGD-HWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGA 98

Query: 380 ---SLNIKENAVNNSIILRNLPLNYSDADLRQVCSTFGPLTKVHAVIDDETDLCLGEGYA 550
                 ++     NS+ + NL  +  + DL ++  TFGP+++V+  +D +T +  G G+ 
Sbjct: 99  ERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFV 158

Query: 551 SFESIDDAERAIQGLKQNYGYD 616
           +F + +DAERAI  L   YGYD
Sbjct: 159 NFVNKEDAERAINKL-NGYGYD 179


Top