BLASTX nr result
ID: Coptis21_contig00015118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015118 (296 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca... 60 1e-07 ref|XP_002518080.1| leucine-rich repeat-containing protein, puta... 60 2e-07 ref|XP_002268547.2| PREDICTED: putative disease resistance prote... 55 8e-06 emb|CAN74893.1| hypothetical protein VITISV_002003 [Vitis vinifera] 55 8e-06 >ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 906 Score = 60.5 bits (145), Expect = 1e-07 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%) Frame = +2 Query: 2 HLELEGTDELSYFPRGLERLSCLRTLSKVVLDRDGGKGCQIGELKLLDHIQGKLRIEGL- 178 +L +E T+ LS P+G+ RLS LRTLSK + + +GC +GELK L+H++G L I GL Sbjct: 649 YLNIEETESLSVLPQGIGRLSNLRTLSKFCIG-ENREGCNVGELKNLNHLRGHLEISGLE 707 Query: 179 --RQRVDSXXXXXXXXXXXRSLDLVFS 253 R + RSLDL FS Sbjct: 708 KVRNVNEVMEANLKNKEHLRSLDLAFS 734 >ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis] gi|223542676|gb|EEF44213.1| leucine-rich repeat-containing protein, putative [Ricinus communis] Length = 940 Score = 60.1 bits (144), Expect = 2e-07 Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Frame = +2 Query: 2 HLELEGTDELSYFPRGLERLSCLRTLSKVVLDRDGGKGCQIGELKLLDHIQGKLRIEGLR 181 HL L TD L+ FP+G+ERLS LR L+K V+ + +GC I ELK L +++G L I L Sbjct: 665 HLNLRETDCLNIFPQGIERLSNLRMLTKFVVS-ENKEGCNIAELKNLKYLRGHLEISRLE 723 Query: 182 QRVDS--XXXXXXXXXXXRSLDLVFS 253 + VD+ +SLDLVFS Sbjct: 724 KVVDTDKAKEADLTNKHLQSLDLVFS 749 >ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis vinifera] Length = 880 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/65 (40%), Positives = 44/65 (67%) Frame = +2 Query: 2 HLELEGTDELSYFPRGLERLSCLRTLSKVVLDRDGGKGCQIGELKLLDHIQGKLRIEGLR 181 HL+ G +L P+G+ RL+ L+TL + V+ DG C+IG+L+ L++++G+L I GLR Sbjct: 638 HLQNCGALDLKGLPKGIARLNSLQTLEEFVVSSDGDAECKIGDLRNLNNLRGELEIRGLR 697 Query: 182 QRVDS 196 + D+ Sbjct: 698 KVEDA 702 >emb|CAN74893.1| hypothetical protein VITISV_002003 [Vitis vinifera] Length = 798 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/65 (40%), Positives = 44/65 (67%) Frame = +2 Query: 2 HLELEGTDELSYFPRGLERLSCLRTLSKVVLDRDGGKGCQIGELKLLDHIQGKLRIEGLR 181 HL+ G +L P+G+ RL+ L+TL + V+ DG C+IG+L+ L++++G+L I GLR Sbjct: 555 HLQNCGALDLKGLPKGIARLNSLQTLEEFVVSSDGDAECKIGDLRNLNNLRGELEIRGLR 614 Query: 182 QRVDS 196 + D+ Sbjct: 615 KVEDA 619