BLASTX nr result

ID: Coptis21_contig00015116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015116
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300189.1| white-brown-complex ABC transporter family [...   333   6e-89
ref|XP_003635438.1| PREDICTED: ABC transporter G family member 1...   329   6e-88
emb|CBI34070.3| unnamed protein product [Vitis vinifera]              328   2e-87
ref|XP_002270647.1| PREDICTED: ABC transporter G family member 1...   328   2e-87
ref|XP_002269388.2| PREDICTED: ABC transporter G family member 1...   327   3e-87

>ref|XP_002300189.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222847447|gb|EEE84994.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 580

 Score =  333 bits (853), Expect = 6e-89
 Identities = 164/188 (87%), Positives = 177/188 (94%)
 Frame = -2

Query: 566 GVFLTWEDLWVTVSAGKDGSRPILQGITGYAQPGEVLAIMGPSGCGKSTLLDALAGRLDS 387
           GVFLTWEDLWVTVS GK GS+ ILQG+TGYAQPGE+LAIMGPSGCGKSTLLD LAGRL S
Sbjct: 1   GVFLTWEDLWVTVSNGKKGSKSILQGLTGYAQPGELLAIMGPSGCGKSTLLDTLAGRLGS 60

Query: 386 NTRQSGHILVNGHKQRLAYGTSAYVTQDDTLITTLTVREAVYYSALLQLPDSMSRSEKRE 207
           NTRQ+G IL+NGHKQRLAYGTSAYVTQD+TLITTLTV+EAVYYSA LQLPDSMSR+EK+E
Sbjct: 61  NTRQTGDILINGHKQRLAYGTSAYVTQDETLITTLTVKEAVYYSAQLQLPDSMSRAEKKE 120

Query: 206 RADTTIKEMGLQAAMNTRIGGWGNKGLSGGQKRRVSICIEILTRPKLLFLDEPTSGLDSA 27
           RA+ TI+EMGLQ AMNTRIGGWG+KGLSGGQKRRVSICIEILT PKLLFLDEPTSGLDSA
Sbjct: 121 RAEVTIREMGLQDAMNTRIGGWGSKGLSGGQKRRVSICIEILTHPKLLFLDEPTSGLDSA 180

Query: 26  ASYHVMKR 3
           ASY+VM R
Sbjct: 181 ASYYVMSR 188


>ref|XP_003635438.1| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]
          Length = 741

 Score =  329 bits (844), Expect = 6e-88
 Identities = 181/278 (65%), Positives = 206/278 (74%), Gaps = 2/278 (0%)
 Frame = -2

Query: 830 DDLEMNSFSSHVEHN--IPSQIPTIFTSFSATPPPRHHTQAQPEYIPAMPSFQIGNEINS 657
           DDLE  S  S  + +  +    P    S S    P  H+      I  +PS +I + + +
Sbjct: 31  DDLETGSIVSEEDRSSTMGRLFPFSVASISDNTGPPPHSD-----IHELPSLRIESNLIT 85

Query: 656 PIVEPVNLLNAREAIYYVKHAAGGLGSQRDGVFLTWEDLWVTVSAGKDGSRPILQGITGY 477
            +   + L +     ++  +  G      +GVFLTW+DLWVTVS  + G R ILQG+ GY
Sbjct: 86  SLQTELGLQHNGVENFFTCNDIG-----LNGVFLTWKDLWVTVSDDESGRRAILQGLAGY 140

Query: 476 AQPGEVLAIMGPSGCGKSTLLDALAGRLDSNTRQSGHILVNGHKQRLAYGTSAYVTQDDT 297
           AQPGEVLAIMGPSGCGKSTLLDALAGRL SNTRQSG ILVNG KQRLA+GTSAYVTQDDT
Sbjct: 141 AQPGEVLAIMGPSGCGKSTLLDALAGRLASNTRQSGEILVNGSKQRLAFGTSAYVTQDDT 200

Query: 296 LITTLTVREAVYYSALLQLPDSMSRSEKRERADTTIKEMGLQAAMNTRIGGWGNKGLSGG 117
           L+TTLTVREAVYYSA LQLPDSMSRSEK+ERA+ TI+EMGLQ AMNTRIGGW  KGLSGG
Sbjct: 201 LMTTLTVREAVYYSAQLQLPDSMSRSEKKERAEMTIREMGLQDAMNTRIGGWSVKGLSGG 260

Query: 116 QKRRVSICIEILTRPKLLFLDEPTSGLDSAASYHVMKR 3
           QKRRVSICIEILTRP+LLFLDEPTSGLDSAASYHVM R
Sbjct: 261 QKRRVSICIEILTRPRLLFLDEPTSGLDSAASYHVMSR 298


>emb|CBI34070.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  328 bits (840), Expect = 2e-87
 Identities = 165/195 (84%), Positives = 176/195 (90%)
 Frame = -2

Query: 587 GLGSQRDGVFLTWEDLWVTVSAGKDGSRPILQGITGYAQPGEVLAIMGPSGCGKSTLLDA 408
           G   +  GVFLTWEDLWVTVS GK G R ILQG+TGYA+PGEVLAIMGPSGCGKSTLLDA
Sbjct: 37  GSDGEDGGVFLTWEDLWVTVSNGKSGCRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDA 96

Query: 407 LAGRLDSNTRQSGHILVNGHKQRLAYGTSAYVTQDDTLITTLTVREAVYYSALLQLPDSM 228
           LAGRL SNT QSG ILVNGHKQ L+YGTSAYVTQDDTLITTLTV EAVYYSALLQLPDSM
Sbjct: 97  LAGRLGSNTSQSGIILVNGHKQALSYGTSAYVTQDDTLITTLTVGEAVYYSALLQLPDSM 156

Query: 227 SRSEKRERADTTIKEMGLQAAMNTRIGGWGNKGLSGGQKRRVSICIEILTRPKLLFLDEP 48
           S+SEK+ERAD TI+EMGLQ ++NTRIGGWG KG+SGGQKRRVSICIEILT PKLLFLDEP
Sbjct: 157 SKSEKKERADMTIREMGLQDSINTRIGGWGVKGISGGQKRRVSICIEILTHPKLLFLDEP 216

Query: 47  TSGLDSAASYHVMKR 3
           TSGLDSAASY+VM R
Sbjct: 217 TSGLDSAASYYVMSR 231


>ref|XP_002270647.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]
          Length = 676

 Score =  328 bits (840), Expect = 2e-87
 Identities = 165/195 (84%), Positives = 176/195 (90%)
 Frame = -2

Query: 587 GLGSQRDGVFLTWEDLWVTVSAGKDGSRPILQGITGYAQPGEVLAIMGPSGCGKSTLLDA 408
           G   +  GVFLTWEDLWVTVS GK G R ILQG+TGYA+PGEVLAIMGPSGCGKSTLLDA
Sbjct: 37  GSDGEDGGVFLTWEDLWVTVSNGKSGCRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDA 96

Query: 407 LAGRLDSNTRQSGHILVNGHKQRLAYGTSAYVTQDDTLITTLTVREAVYYSALLQLPDSM 228
           LAGRL SNT QSG ILVNGHKQ L+YGTSAYVTQDDTLITTLTV EAVYYSALLQLPDSM
Sbjct: 97  LAGRLGSNTSQSGIILVNGHKQALSYGTSAYVTQDDTLITTLTVGEAVYYSALLQLPDSM 156

Query: 227 SRSEKRERADTTIKEMGLQAAMNTRIGGWGNKGLSGGQKRRVSICIEILTRPKLLFLDEP 48
           S+SEK+ERAD TI+EMGLQ ++NTRIGGWG KG+SGGQKRRVSICIEILT PKLLFLDEP
Sbjct: 157 SKSEKKERADMTIREMGLQDSINTRIGGWGVKGISGGQKRRVSICIEILTHPKLLFLDEP 216

Query: 47  TSGLDSAASYHVMKR 3
           TSGLDSAASY+VM R
Sbjct: 217 TSGLDSAASYYVMSR 231


>ref|XP_002269388.2| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]
          Length = 741

 Score =  327 bits (838), Expect = 3e-87
 Identities = 181/276 (65%), Positives = 206/276 (74%)
 Frame = -2

Query: 830 DDLEMNSFSSHVEHNIPSQIPTIFTSFSATPPPRHHTQAQPEYIPAMPSFQIGNEINSPI 651
           DDLE  S  S  E +  S +  +F  FS      +  Q     I  +PS +I + + + +
Sbjct: 31  DDLETGSIVS--EEDRSSTMGRLFP-FSVASISDNTGQPPHSDIHELPSLRIESNLTTSL 87

Query: 650 VEPVNLLNAREAIYYVKHAAGGLGSQRDGVFLTWEDLWVTVSAGKDGSRPILQGITGYAQ 471
              + L +     ++  +  G      + VFLTW+DLWVTVS  + G R ILQG+ GYAQ
Sbjct: 88  QTELGLQHNGVENFFTCNDIG-----LNDVFLTWKDLWVTVSDDESGRRAILQGLAGYAQ 142

Query: 470 PGEVLAIMGPSGCGKSTLLDALAGRLDSNTRQSGHILVNGHKQRLAYGTSAYVTQDDTLI 291
           PGEVLAIMGPSGCGKSTLLDALAGRL SNTRQSG ILVNG KQRLA+GTSAYVTQDDTL+
Sbjct: 143 PGEVLAIMGPSGCGKSTLLDALAGRLASNTRQSGEILVNGSKQRLAFGTSAYVTQDDTLM 202

Query: 290 TTLTVREAVYYSALLQLPDSMSRSEKRERADTTIKEMGLQAAMNTRIGGWGNKGLSGGQK 111
           TTLTVREAVYYSA LQLPDSMSRSEK+ERA+ TI+EMGLQ AMNTRIGGW  KGLSGGQK
Sbjct: 203 TTLTVREAVYYSAQLQLPDSMSRSEKKERAEMTIREMGLQDAMNTRIGGWSVKGLSGGQK 262

Query: 110 RRVSICIEILTRPKLLFLDEPTSGLDSAASYHVMKR 3
           RRVSICIEILTRP+LLFLDEPTSGLDSAASYHVM R
Sbjct: 263 RRVSICIEILTRPRLLFLDEPTSGLDSAASYHVMSR 298


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