BLASTX nr result

ID: Coptis21_contig00015110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015110
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267334.2| PREDICTED: methylglutaconyl-CoA hydratase, m...   392   e-106
emb|CBI25767.3| unnamed protein product [Vitis vinifera]              392   e-106
ref|XP_002532355.1| Methylglutaconyl-CoA hydratase, mitochondria...   370   e-100
ref|XP_003549935.1| PREDICTED: methylglutaconyl-CoA hydratase, m...   358   1e-96
ref|XP_004147227.1| PREDICTED: methylglutaconyl-CoA hydratase, m...   350   6e-94

>ref|XP_002267334.2| PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Vitis
            vinifera]
          Length = 295

 Score =  392 bits (1007), Expect = e-106
 Identities = 208/303 (68%), Positives = 237/303 (78%)
 Frame = +1

Query: 223  QAYRNLILESISDSVKLERLSGSDSGIVEVKLDRPGAKNAIGKDMLGGLQRYLEIVNEDS 402
            Q+ R LIL+S  +SV+++RLS  DSGIVEV LDRP AKNAIGK+MLGGLQ   E +N D+
Sbjct: 23   QSCRTLILQSAFESVRVQRLSHDDSGIVEVHLDRPEAKNAIGKEMLGGLQNIFEAINRDA 82

Query: 403  SANVLLISSSVPRVFCAGADLKERRTMNPTEVRFFVNSLRSTFSYLEALRLPTISVIXXX 582
            SANV+++SSSVPRVFCAGADLKER+TMNP+E RFFVNSLRSTFS LEAL +PTI+VI   
Sbjct: 83   SANVVMLSSSVPRVFCAGADLKERKTMNPSETRFFVNSLRSTFSLLEALHVPTIAVIEGA 142

Query: 583  XXXXXXXMALSCDLRICGEDALFGLPETGLAIIPGAGGTQRLPRLVGKSIAKELIYTGRK 762
                   MALSCDLRICGEDA+ GLPETGLAIIPGAGGTQRL RLVGKSIAKELI+TGRK
Sbjct: 143  ALGGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLSRLVGKSIAKELIFTGRK 202

Query: 763  VDGRDAMAMGTT*STCFVFQFLSFHKSSVHHTMEVHCKTGLVNYCVRAGGAHLKALEIAQ 942
            V GRDAM++                              GLVNYCV AG AHLKALEIAQ
Sbjct: 203  VGGRDAMSV------------------------------GLVNYCVPAGEAHLKALEIAQ 232

Query: 943  DINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQLLNTEDRLEGLAAFAEKRKPIY 1122
             INQKGP+A++MAKRAI+EGLE++  SALALEEECYEQLLNT+DRLEGLAAF+EKRKP Y
Sbjct: 233  HINQKGPLALQMAKRAINEGLELDMESALALEEECYEQLLNTKDRLEGLAAFSEKRKPRY 292

Query: 1123 TGK 1131
             G+
Sbjct: 293  NGE 295


>emb|CBI25767.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  392 bits (1007), Expect = e-106
 Identities = 208/303 (68%), Positives = 237/303 (78%)
 Frame = +1

Query: 223  QAYRNLILESISDSVKLERLSGSDSGIVEVKLDRPGAKNAIGKDMLGGLQRYLEIVNEDS 402
            Q+ R LIL+S  +SV+++RLS  DSGIVEV LDRP AKNAIGK+MLGGLQ   E +N D+
Sbjct: 372  QSCRTLILQSAFESVRVQRLSHDDSGIVEVHLDRPEAKNAIGKEMLGGLQNIFEAINRDA 431

Query: 403  SANVLLISSSVPRVFCAGADLKERRTMNPTEVRFFVNSLRSTFSYLEALRLPTISVIXXX 582
            SANV+++SSSVPRVFCAGADLKER+TMNP+E RFFVNSLRSTFS LEAL +PTI+VI   
Sbjct: 432  SANVVMLSSSVPRVFCAGADLKERKTMNPSETRFFVNSLRSTFSLLEALHVPTIAVIEGA 491

Query: 583  XXXXXXXMALSCDLRICGEDALFGLPETGLAIIPGAGGTQRLPRLVGKSIAKELIYTGRK 762
                   MALSCDLRICGEDA+ GLPETGLAIIPGAGGTQRL RLVGKSIAKELI+TGRK
Sbjct: 492  ALGGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLSRLVGKSIAKELIFTGRK 551

Query: 763  VDGRDAMAMGTT*STCFVFQFLSFHKSSVHHTMEVHCKTGLVNYCVRAGGAHLKALEIAQ 942
            V GRDAM++                              GLVNYCV AG AHLKALEIAQ
Sbjct: 552  VGGRDAMSV------------------------------GLVNYCVPAGEAHLKALEIAQ 581

Query: 943  DINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQLLNTEDRLEGLAAFAEKRKPIY 1122
             INQKGP+A++MAKRAI+EGLE++  SALALEEECYEQLLNT+DRLEGLAAF+EKRKP Y
Sbjct: 582  HINQKGPLALQMAKRAINEGLELDMESALALEEECYEQLLNTKDRLEGLAAFSEKRKPRY 641

Query: 1123 TGK 1131
             G+
Sbjct: 642  NGE 644


>ref|XP_002532355.1| Methylglutaconyl-CoA hydratase, mitochondrial precursor, putative
            [Ricinus communis] gi|223527942|gb|EEF30028.1|
            Methylglutaconyl-CoA hydratase, mitochondrial precursor,
            putative [Ricinus communis]
          Length = 325

 Score =  370 bits (950), Expect = e-100
 Identities = 198/306 (64%), Positives = 236/306 (77%), Gaps = 1/306 (0%)
 Frame = +1

Query: 217  QKQAYRNLILESIS-DSVKLERLSGSDSGIVEVKLDRPGAKNAIGKDMLGGLQRYLEIVN 393
            Q Q  R LILES+S +SVKL+RL  SDSGI+EV LDRPGAKNAIGK+ML GL+   E +N
Sbjct: 50   QFQTRRTLILESVSSESVKLKRLPDSDSGIMEVNLDRPGAKNAIGKEMLRGLRNTFETIN 109

Query: 394  EDSSANVLLISSSVPRVFCAGADLKERRTMNPTEVRFFVNSLRSTFSYLEALRLPTISVI 573
             D+SANV++I SSVP+VFCAGADLKER+ M P+EV+FFVNSLRSTFS +E L +PTI+VI
Sbjct: 110  NDASANVVMICSSVPKVFCAGADLKERKIMTPSEVQFFVNSLRSTFSLVEDLCIPTIAVI 169

Query: 574  XXXXXXXXXXMALSCDLRICGEDALFGLPETGLAIIPGAGGTQRLPRLVGKSIAKELIYT 753
                      MALSCDLRICGEDA+ GLPETGLAIIPGAGGTQRLPRLVGKS+AKELI+T
Sbjct: 170  EGAALGGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLPRLVGKSVAKELIFT 229

Query: 754  GRKVDGRDAMAMGTT*STCFVFQFLSFHKSSVHHTMEVHCKTGLVNYCVRAGGAHLKALE 933
            GRK+ GR+AM+M                              GLVNY V AG A LKALE
Sbjct: 230  GRKIGGREAMSM------------------------------GLVNYSVPAGEARLKALE 259

Query: 934  IAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQLLNTEDRLEGLAAFAEKRK 1113
            +A++INQKGP+AIRMAK+AI+EGL+V+ +SAL LEEECYEQL++T+DRLEGLA+FAE+RK
Sbjct: 260  VAREINQKGPIAIRMAKKAINEGLKVDMASALELEEECYEQLMDTKDRLEGLASFAERRK 319

Query: 1114 PIYTGK 1131
            P Y G+
Sbjct: 320  PRYRGE 325


>ref|XP_003549935.1| PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Glycine
            max]
          Length = 314

 Score =  358 bits (920), Expect = 1e-96
 Identities = 187/307 (60%), Positives = 233/307 (75%), Gaps = 1/307 (0%)
 Frame = +1

Query: 214  WQKQAYRNLILES-ISDSVKLERLSGSDSGIVEVKLDRPGAKNAIGKDMLGGLQRYLEIV 390
            +Q Q +R LIL+S  S+ VKL +L+G DSGIVE+ LDRP +KNAIGK+ML GL +  E++
Sbjct: 38   YQHQTHRTLILDSSASEFVKLHKLNGPDSGIVEISLDRPESKNAIGKEMLRGLNQAFELI 97

Query: 391  NEDSSANVLLISSSVPRVFCAGADLKERRTMNPTEVRFFVNSLRSTFSYLEALRLPTISV 570
            N+ S ANV +ISSSVP VFCAGADLKERR M+ +E + FV SLRSTFS+LE +R+PTI+V
Sbjct: 98   NQKSYANVAMISSSVPGVFCAGADLKERRAMSQSEAKIFVKSLRSTFSFLEDVRVPTIAV 157

Query: 571  IXXXXXXXXXXMALSCDLRICGEDALFGLPETGLAIIPGAGGTQRLPRLVGKSIAKELIY 750
            I          MAL+CD+RICGE+AL GLPETGLAIIPGAGGTQRLPRLVGK+IAK++I+
Sbjct: 158  IEGVALGGGLEMALACDIRICGENALMGLPETGLAIIPGAGGTQRLPRLVGKAIAKDIIF 217

Query: 751  TGRKVDGRDAMAMGTT*STCFVFQFLSFHKSSVHHTMEVHCKTGLVNYCVRAGGAHLKAL 930
            TGRK+DG++A+++                              GLVNYCV AG A+ KAL
Sbjct: 218  TGRKIDGKEALSL------------------------------GLVNYCVPAGEAYSKAL 247

Query: 931  EIAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQLLNTEDRLEGLAAFAEKR 1110
             IA DINQKGP+A+RMAKRAI+EG+E + +SAL LEE+CY+Q+LNT+DRLEGLAAFAEKR
Sbjct: 248  AIAHDINQKGPVALRMAKRAINEGVETDLTSALELEEDCYDQVLNTKDRLEGLAAFAEKR 307

Query: 1111 KPIYTGK 1131
            KP YTG+
Sbjct: 308  KPSYTGE 314


>ref|XP_004147227.1| PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial-like
            [Cucumis sativus] gi|449514688|ref|XP_004164451.1|
            PREDICTED: methylglutaconyl-CoA hydratase,
            mitochondrial-like [Cucumis sativus]
          Length = 328

 Score =  350 bits (897), Expect = 6e-94
 Identities = 201/351 (57%), Positives = 239/351 (68%), Gaps = 1/351 (0%)
 Frame = +1

Query: 82   LSSSKMSPIPALAARSFSNRFNKTRPASIYLSQLIDRVNPIAPEWQKQAYRNLILESISD 261
            L SS+  PIPA   R       +T P+S       D  N  +  W+    R LIL+S+S 
Sbjct: 19   LHSSQNLPIPAKNLR-------QTVPSSTPS----DAFNLFSHPWRYTHCRTLILDSLST 67

Query: 262  S-VKLERLSGSDSGIVEVKLDRPGAKNAIGKDMLGGLQRYLEIVNEDSSANVLLISSSVP 438
              V+L RLS SDSGIVE+ LDRP AKNAI KDML GL+   E V+ D S NV++I SSVP
Sbjct: 68   KPVRLHRLSDSDSGIVEIHLDRPEAKNAISKDMLRGLRHAFESVDSDPSVNVMMIRSSVP 127

Query: 439  RVFCAGADLKERRTMNPTEVRFFVNSLRSTFSYLEALRLPTISVIXXXXXXXXXXMALSC 618
            +VFCAGADLKER+ M  +EV  FV SLRS F++LEAL +PTISVI          MAL+C
Sbjct: 128  KVFCAGADLKERKKMAASEVHSFVTSLRSAFTFLEALPIPTISVIEGAALGGGLEMALAC 187

Query: 619  DLRICGEDALFGLPETGLAIIPGAGGTQRLPRLVGKSIAKELIYTGRKVDGRDAMAMGTT 798
            DLRICGEDA   LPETGLAIIPGAGGT RLPRLVGKSIAKELI+TGRKV GRDA+++   
Sbjct: 188  DLRICGEDAKLSLPETGLAIIPGAGGTARLPRLVGKSIAKELIFTGRKVSGRDALSI--- 244

Query: 799  *STCFVFQFLSFHKSSVHHTMEVHCKTGLVNYCVRAGGAHLKALEIAQDINQKGPMAIRM 978
                                       GLVNYCV AG A+ KALEIAQ+IN+KGP+AIRM
Sbjct: 245  ---------------------------GLVNYCVSAGEAYTKALEIAQEINEKGPLAIRM 277

Query: 979  AKRAIDEGLEVEFSSALALEEECYEQLLNTEDRLEGLAAFAEKRKPIYTGK 1131
            AK+AI+EGLE +  SA+ +E+ECY +LL+T+DRLEGLAAFAEKRKP Y G+
Sbjct: 278  AKKAINEGLEGDLESAMEIEDECYTELLDTKDRLEGLAAFAEKRKPRYRGE 328


Top