BLASTX nr result

ID: Coptis21_contig00015106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015106
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616482.1| hypothetical protein MTR_5g080880 [Medicago ...    87   5e-15
ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795...    87   6e-15
ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|2...    87   6e-15
gb|AFK47406.1| unknown [Medicago truncatula]                           86   1e-14
ref|XP_002316260.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14

>ref|XP_003616482.1| hypothetical protein MTR_5g080880 [Medicago truncatula]
           gi|355517817|gb|AES99440.1| hypothetical protein
           MTR_5g080880 [Medicago truncatula]
          Length = 331

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
 Frame = +2

Query: 56  FTFKIQDGLGNNRMILEKEYEGDVINVEVQKPETFTC--HGEQDDDK--VRWMCDQPGIP 223
           F FKI D  GN  + L++ Y+G+ I VEV  P+  T   H  QDDDK        Q  IP
Sbjct: 95  FPFKIVDNPGNQTITLKRTYQGEEIQVEVHMPDLVTGEEHDHQDDDKDDESERATQSSIP 154

Query: 224 LIVCIYREAGNGTSLEFSCMLYHDGLKVIKMIRKSLDTCKDDLTCGELDLKNVDYYSNKV 403
           L V + ++  +G SLEFSC+ Y D + +  +  K+ D   + +     D +++D    K 
Sbjct: 155 LSVSVSKK--DGPSLEFSCVAYPDEIVIDSLSVKNPDFSDEQIPYDGPDFQDLDEALQKS 212

Query: 404 LERFLELRGINRSIYTFLNKCMVKKHCKVFLRWM 505
             ++LE+RGI  S   FL++ M+ K  + +L W+
Sbjct: 213 FHKYLEIRGIKPSTTNFLHEYMINKDSREYLVWL 246


>ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial [Vitis
           vinifera] gi|296086172|emb|CBI31613.3| unnamed protein
           product [Vitis vinifera]
          Length = 253

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
 Frame = +2

Query: 56  FTFKIQDGLGNNRMILEKEYEGDVINVEVQKPETFTCHGEQDD-DKVRWMCDQPGIPLIV 232
           F F+IQD  G   + L +EY+G+VI VEV  P+  T  G+ D+ D      +Q  IPL+V
Sbjct: 96  FPFEIQDNPGQQTISLAREYQGEVIKVEVHMPDLVTGEGDDDNNDDDNEKGNQSSIPLVV 155

Query: 233 CIYREAGNGTSLEFSCMLYHDGLKVIKMIRKSLDTCKDDLTCGELDLKNVDYYSNKVLER 412
            + ++  NG  LEF C  + D + +  +  K+ +  ++ +     D  ++D    K   +
Sbjct: 156 SVSKK--NGPFLEFGCTAFADEIAIDSLSVKNPEISEEQIAYEGPDFTDLDENLQKAFHK 213

Query: 413 FLELRGINRSIYTFLNKCMVKKHCKVFLRWM 505
           +LE+RGI  S   FL++ M+ K  + +L W+
Sbjct: 214 YLEIRGIKPSTTNFLHEYMINKDSREYLLWL 244


>ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|222865301|gb|EEF02432.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
 Frame = +2

Query: 56  FTFKIQDGLGNNRMILEKEYEGDVINVEVQKPETFTCHGEQ---DDDKVRWMCDQPGIPL 226
           F FKI D  G   +IL +EYEG+++ VEV  P+  T  GE+   DDDK + +  Q  IPL
Sbjct: 100 FPFKIDDNAGQQTVILTREYEGELVKVEVHMPDFVT--GEENDVDDDKEQPV--QSSIPL 155

Query: 227 IVCIYREAGNGTSLEFSCMLYHDGLKVIKMIRKSLDTCKDDLTCGELDLKNVDYYSNKVL 406
           +V + +++G  T L+F+C+ Y D + +  +     +T +D++     +  ++D    K  
Sbjct: 156 VVTVSKKSG--TCLQFNCVAYADEITIDSISIGVPETSEDEMAFDGPNFHDLDENLKKGF 213

Query: 407 ERFLELRGINRSIYTFLNKCMVKKHCKVFLRWM 505
            ++LE+RGI  S   FL++ M+ K  + ++ W+
Sbjct: 214 HKYLEIRGIKASTTNFLHEYMISKDSREYMGWL 246


>gb|AFK47406.1| unknown [Medicago truncatula]
          Length = 255

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
 Frame = +2

Query: 56  FTFKIQDGLGNNRMILEKEYEGDVINVEVQKPETFTC--HGEQDDDK--VRWMCDQPGIP 223
           F FKI D  GN  + L++ Y+G+ I VEV  P+  T   H  QDDDK        Q  IP
Sbjct: 95  FPFKIVDNPGNQTITLKRTYQGEEIQVEVHMPDLVTGEEHDHQDDDKDDESERATQSSIP 154

Query: 224 LIVCIYREAGNGTSLEFSCMLYHDGLKVIKMIRKSLDTCKDDLTCGELDLKNVDYYSNKV 403
           L V + ++  +G SLEFSC+ Y D + +  +  K+ D   + +     D +++D    K 
Sbjct: 155 LSVSVSKK--DGPSLEFSCVAYPDEIVIDSLSVKNPDFSDEQIPYDGPDFQDLDEALQKS 212

Query: 404 LERFLELRGINRSIYTFLNKCMVKKHCKVFLRWM 505
             ++LE+RGI  S   FL++ ++ K  + +L W+
Sbjct: 213 FHKYLEIRGIKPSTTNFLHEYIINKDSREYLVWL 246


>ref|XP_002316260.1| predicted protein [Populus trichocarpa] gi|222865300|gb|EEF02431.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
 Frame = +2

Query: 56  FTFKIQDGLGNNRMILEKEYEGDVINVEVQKPETFTCHGEQDD------DKVRWMCDQPG 217
           + FKI D  G   +IL +EYEG+++ VEV  P+  T  GE +D      D  R +  Q  
Sbjct: 101 YPFKIDDNAGQQTVILTREYEGELVRVEVHMPDVVT--GEDNDVDDGSDDNQRPV--QSS 156

Query: 218 IPLIVCIYREAGNGTSLEFSCMLYHDGLKVIKMIRKSLDTCKDDLTCGELDLKNVDYYSN 397
           IPL+V + ++ G  T LEF+C+ Y D +K+  M     +T +D +     +  + D    
Sbjct: 157 IPLVVTVSKKCG--TCLEFNCVAYADEIKIDSMSIIGPETSEDQMAYDGPNFHDFDEKLK 214

Query: 398 KVLERFLELRGINRSIYTFLNKCMVKKHCKVFLRWM 505
           K   ++LE+RGI  S   FL++ M+ K  + ++ W+
Sbjct: 215 KGFHKYLEIRGIKASTTNFLHEYMINKDSREYMGWL 250


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