BLASTX nr result

ID: Coptis21_contig00015100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015100
         (1898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38885.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vin...   402   e-109
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   392   e-106
ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   391   e-106
gb|AFK39131.1| unknown [Lotus japonicus]                              391   e-106

>emb|CBI38885.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  402 bits (1034), Expect = e-109
 Identities = 205/238 (86%), Positives = 219/238 (92%), Gaps = 3/238 (1%)
 Frame = +3

Query: 174 MDPNFELQEAGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DPGSPTVGSSRSWK 344
           MDPN +LQE+GWEELRKEARKIEGDLDVKLSSYAKL  RFTQG   D GSPTV SSRSWK
Sbjct: 1   MDPNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWK 60

Query: 345 SMEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEYIQEFRRIKGNISS 524
           SMEMEI+SLLEKL DTND+MSRCAASA PTTS++ KLARHRDILHE+ QEFRRIKGN++S
Sbjct: 61  SMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNS 120

Query: 525 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGS 704
           MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGS+SHIDDVISQAQTTRA L S
Sbjct: 121 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNS 180

Query: 705 QRTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 878
           QRTL GD QGKVK L DKFPIIRGLLG+I+R+RSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 181 QRTLFGDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 238


>ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vinifera]
          Length = 239

 Score =  402 bits (1034), Expect = e-109
 Identities = 205/238 (86%), Positives = 219/238 (92%), Gaps = 3/238 (1%)
 Frame = +3

Query: 174 MDPNFELQEAGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DPGSPTVGSSRSWK 344
           MDPN +LQE+GWEELRKEARKIEGDLDVKLSSYAKL  RFTQG   D GSPTV SSRSWK
Sbjct: 2   MDPNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWK 61

Query: 345 SMEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEYIQEFRRIKGNISS 524
           SMEMEI+SLLEKL DTND+MSRCAASA PTTS++ KLARHRDILHE+ QEFRRIKGN++S
Sbjct: 62  SMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNS 121

Query: 525 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGS 704
           MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGS+SHIDDVISQAQTTRA L S
Sbjct: 122 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNS 181

Query: 705 QRTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 878
           QRTL GD QGKVK L DKFPIIRGLLG+I+R+RSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 182 QRTLFGDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  392 bits (1007), Expect = e-106
 Identities = 199/237 (83%), Positives = 216/237 (91%), Gaps = 3/237 (1%)
 Frame = +3

Query: 177 DPNFELQEAGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DPGSPTVGSSRSWKS 347
           + + +LQE+GWEELR+EARKIEGDLDVKLSSYAKL  RFTQG   D GSPTVGS RSWKS
Sbjct: 3   ESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSWKS 62

Query: 348 MEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEYIQEFRRIKGNISSM 527
           MEMEI+SLLEKL D NDSMSRCAASA PTTS++ KLARHRDILHEY QEFRRIKGNI+SM
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSM 122

Query: 528 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQ 707
           REHAELLSSVRDDISEYKASGSMSP +Q+LRERA+IHGS+SHIDDVI QAQ TRAVLGSQ
Sbjct: 123 REHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQ 182

Query: 708 RTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 878
           R+L  DVQGKVK LGDKFP+IRGLLG+IKRKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 183 RSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  391 bits (1004), Expect = e-106
 Identities = 198/237 (83%), Positives = 216/237 (91%), Gaps = 3/237 (1%)
 Frame = +3

Query: 177 DPNFELQEAGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DPGSPTVGSSRSWKS 347
           + + +LQE+GWEELR+EARKIEGDLDVKLSSYAKL  RFTQG   D GSPTVGS RSWKS
Sbjct: 3   ESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKS 62

Query: 348 MEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEYIQEFRRIKGNISSM 527
           MEMEI+SLLEKL D NDSMSRCAASA PTTS++ KLARHRDILHEY QEFRRIKGNI+S+
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSL 122

Query: 528 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQ 707
           REHAELLSSVRDDISEYKASGSMSP +Q+LRERA+IHGS+SHIDDVI QAQ TRAVLGSQ
Sbjct: 123 REHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQ 182

Query: 708 RTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 878
           R+L  DVQGKVK LGDKFP+IRGLLG+IKRKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 183 RSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>gb|AFK39131.1| unknown [Lotus japonicus]
          Length = 239

 Score =  391 bits (1004), Expect = e-106
 Identities = 200/237 (84%), Positives = 215/237 (90%), Gaps = 3/237 (1%)
 Frame = +3

Query: 177 DPNFELQEAGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DPGSPTVGSSRSWKS 347
           D N ELQE+GWEELRKEARKIEGDLDVKLSSYAKL  RFTQG   D GSP +GSSRSWKS
Sbjct: 3   DSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKS 62

Query: 348 MEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEYIQEFRRIKGNISSM 527
           MEMEI+SLLEKL D NDSMSRCAASA P TS++ KLARHRDILHE+ QEFRRIKGNI+SM
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSM 122

Query: 528 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQ 707
           REHAELL+SVRDDIS++K SGSMSPRMQLLRERAAIHGS+SHIDDVISQAQ TR+VLGSQ
Sbjct: 123 REHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQ 182

Query: 708 RTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 878
           R L GDVQGKVK LGDKFPIIR LLG+I+RKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 183 RALFGDVQGKVKVLGDKFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK 239


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