BLASTX nr result

ID: Coptis21_contig00015092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015092
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270770.2| PREDICTED: uncharacterized protein LOC100263...   318   1e-84
emb|CBI25524.3| unnamed protein product [Vitis vinifera]              318   1e-84
ref|XP_003602446.1| SET and MYND domain-containing protein [Medi...   281   1e-73
ref|XP_002323703.1| tetratricopeptide repeat-containing protein ...   270   4e-70
ref|XP_003522516.1| PREDICTED: uncharacterized protein LOC100794...   266   4e-69

>ref|XP_002270770.2| PREDICTED: uncharacterized protein LOC100263830 [Vitis vinifera]
          Length = 799

 Score =  318 bits (815), Expect = 1e-84
 Identities = 168/317 (52%), Positives = 211/317 (66%)
 Frame = -3

Query: 953  VEQRKQSKGTMKPIDALELTHNYGRMPSKIKLELHIYSVVLAYCLQRSCTVELPLDGNFA 774
            VEQ+K S      +D L+L+H+Y  M  + KL+LHIYSVVL YCLQ S   ELPL+G   
Sbjct: 374  VEQKKHSCNASNLMDTLDLSHSYKTMAPESKLDLHIYSVVLLYCLQHSYGFELPLNGISI 433

Query: 773  SQLVILISQIRVNSMAVVHMKSQDSYRTLGQSGKGSPTEDTLTTNIEQVRVGQAIYSTGS 594
            SQL+ILISQI+VNS+A+V MK  D Y  L QS   SP     T+N+EQVRVGQAIYS  S
Sbjct: 434  SQLIILISQIKVNSIAIVRMKFMDGYSPLDQSVNFSPAGGAFTSNMEQVRVGQAIYSVAS 493

Query: 593  LFNHSCQPNIHAYFLSRTLFIRSTEFVTAGYPLELSYGPQVGQWNFTERQQLLGDQYAFK 414
            LFNHSCQPNIHAYFLSRTLF+R+TE V  G PLELSYGPQVGQW+  +RQ+ L D+Y+F+
Sbjct: 494  LFNHSCQPNIHAYFLSRTLFLRATEHVAVGCPLELSYGPQVGQWDCKDRQKFLKDEYSFR 553

Query: 413  CQCSGCSELNFSDLVRDAFSCLNPRCSGVVLDEHVAFYENEEGSCLENVHSICSLEHRHP 234
            C+CSGCSELN SDLV +AF C+NP C G VLD  V  YEN++    + V   C  E   P
Sbjct: 554  CECSGCSELNVSDLVLNAFRCVNPDCFGTVLDSCVIKYENKKFERFQGVPQDCISE---P 610

Query: 233  VDKMKREDIKKVGQLLFEQKDGTRCIDHGCCLNCGSYRSLEQSRIVSEKAKSNINRLQDT 54
              ++K + I++V    F           G CL+CG+YR LE S     +A   I+RLQ+ 
Sbjct: 611  HLQLKNDGIREVAHQAFANSSFRAA--PGYCLHCGAYRDLEASHATVGEAGIYISRLQEA 668

Query: 53   ILTKHIPRNVLFDAVRA 3
            I++K +P     DA+R+
Sbjct: 669  IVSKEVPATTFSDALRS 685


>emb|CBI25524.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score =  318 bits (815), Expect = 1e-84
 Identities = 168/317 (52%), Positives = 211/317 (66%)
 Frame = -3

Query: 953  VEQRKQSKGTMKPIDALELTHNYGRMPSKIKLELHIYSVVLAYCLQRSCTVELPLDGNFA 774
            VEQ+K S      +D L+L+H+Y  M  + KL+LHIYSVVL YCLQ S   ELPL+G   
Sbjct: 348  VEQKKHSCNASNLMDTLDLSHSYKTMAPESKLDLHIYSVVLLYCLQHSYGFELPLNGISI 407

Query: 773  SQLVILISQIRVNSMAVVHMKSQDSYRTLGQSGKGSPTEDTLTTNIEQVRVGQAIYSTGS 594
            SQL+ILISQI+VNS+A+V MK  D Y  L QS   SP     T+N+EQVRVGQAIYS  S
Sbjct: 408  SQLIILISQIKVNSIAIVRMKFMDGYSPLDQSVNFSPAGGAFTSNMEQVRVGQAIYSVAS 467

Query: 593  LFNHSCQPNIHAYFLSRTLFIRSTEFVTAGYPLELSYGPQVGQWNFTERQQLLGDQYAFK 414
            LFNHSCQPNIHAYFLSRTLF+R+TE V  G PLELSYGPQVGQW+  +RQ+ L D+Y+F+
Sbjct: 468  LFNHSCQPNIHAYFLSRTLFLRATEHVAVGCPLELSYGPQVGQWDCKDRQKFLKDEYSFR 527

Query: 413  CQCSGCSELNFSDLVRDAFSCLNPRCSGVVLDEHVAFYENEEGSCLENVHSICSLEHRHP 234
            C+CSGCSELN SDLV +AF C+NP C G VLD  V  YEN++    + V   C  E   P
Sbjct: 528  CECSGCSELNVSDLVLNAFRCVNPDCFGTVLDSCVIKYENKKFERFQGVPQDCISE---P 584

Query: 233  VDKMKREDIKKVGQLLFEQKDGTRCIDHGCCLNCGSYRSLEQSRIVSEKAKSNINRLQDT 54
              ++K + I++V    F           G CL+CG+YR LE S     +A   I+RLQ+ 
Sbjct: 585  HLQLKNDGIREVAHQAFANSSFRAA--PGYCLHCGAYRDLEASHATVGEAGIYISRLQEA 642

Query: 53   ILTKHIPRNVLFDAVRA 3
            I++K +P     DA+R+
Sbjct: 643  IVSKEVPATTFSDALRS 659


>ref|XP_003602446.1| SET and MYND domain-containing protein [Medicago truncatula]
            gi|355491494|gb|AES72697.1| SET and MYND
            domain-containing protein [Medicago truncatula]
          Length = 785

 Score =  281 bits (720), Expect = 1e-73
 Identities = 158/324 (48%), Positives = 206/324 (63%), Gaps = 11/324 (3%)
 Frame = -3

Query: 941  KQSKGTMKP-IDALELTHNYGRMPSKIKLELHIYSVVLAYCLQRSCTVELPLDGNFASQL 765
            K S G +   ++ LEL+H Y  MP + KL+ HIY++VL YCL+ S    L ++G    Q+
Sbjct: 366  KNSSGDITSFVEKLELSHCYEHMPFESKLDSHIYAIVLLYCLKHSYGAMLAINGISILQV 425

Query: 764  VILISQIRVNSMAVVHMKSQDSYRTLGQSGKGSPTEDT--LTTNIEQVRVGQAIYSTGSL 591
            VILISQI+VN M VV +KS D++    QSG G P   +  LT+N+EQVRVG+AIY  GSL
Sbjct: 426  VILISQIKVNCMTVVRLKSIDAHGLSDQSG-GFPFHSSVHLTSNVEQVRVGKAIYKVGSL 484

Query: 590  FNHSCQPNIHAYFLSRTLFIRSTEFVTAGYPLELSYGPQVGQWNFTERQQLLGDQYAFKC 411
            FNHSCQPN+HAYFLSRTL++R+T+ V AG  LELSYGPQVG W+  +RQ  L D+YAF C
Sbjct: 485  FNHSCQPNVHAYFLSRTLYLRTTQAVAAGCQLELSYGPQVGLWDCKDRQSFLKDEYAFHC 544

Query: 410  QCSGCSELNFSDLVRDAFSCLNPRCSGVVLDEHVAFYENEEGSCLENVHSICSLEHRHPV 231
            QC+GCSE+N SD+V +AF C+NP CSG VL+  V   E ++            ++H    
Sbjct: 545  QCTGCSEVNLSDIVLNAFHCVNPNCSGAVLESRVLECEKQK------------IKHLAVA 592

Query: 230  DK-MKREDIKKVGQLLFEQKDGTRCIDHGCCLNCGSYRSLEQSRIVSEKA-------KSN 75
            DK +K +DI +V    F Q D +  I  G CL C SYR LE SR   +KA       K  
Sbjct: 593  DKVIKNDDIYEVCLHAFNQNDASIHIQPGFCLKCSSYRDLESSRATVDKALICIKRLKYG 652

Query: 74   INRLQDTILTKHIPRNVLFDAVRA 3
             +RLQD IL+K I    + DA+R+
Sbjct: 653  NDRLQDAILSKEISNTSISDALRS 676


>ref|XP_002323703.1| tetratricopeptide repeat-containing protein [Populus trichocarpa]
            gi|222868333|gb|EEF05464.1| tetratricopeptide
            repeat-containing protein [Populus trichocarpa]
          Length = 584

 Score =  270 bits (690), Expect = 4e-70
 Identities = 149/301 (49%), Positives = 192/301 (63%)
 Frame = -3

Query: 905  LELTHNYGRMPSKIKLELHIYSVVLAYCLQRSCTVELPLDGNFASQLVILISQIRVNSMA 726
            L L+H+Y ++  + KLELHIY++VL  CLQ S   ELP++G   SQ +ILISQIRVNSMA
Sbjct: 175  LGLSHSYTQITPESKLELHIYAIVLLCCLQHSFGFELPINGVSLSQTIILISQIRVNSMA 234

Query: 725  VVHMKSQDSYRTLGQSGKGSPTEDTLTTNIEQVRVGQAIYSTGSLFNHSCQPNIHAYFLS 546
            +V MKS D      Q  K +   D LT+++EQV VGQAIY   SLFNHSC PNIHAYFLS
Sbjct: 235  IVRMKSVDD--PPDQFRKLTSVGDALTSSLEQVPVGQAIYKAASLFNHSCLPNIHAYFLS 292

Query: 545  RTLFIRSTEFVTAGYPLELSYGPQVGQWNFTERQQLLGDQYAFKCQCSGCSELNFSDLVR 366
            RTLFIR+TE+V+ G PLELSYGPQVGQ +  +R + L D+Y+F+CQC GCS+LN SDLV 
Sbjct: 293  RTLFIRTTEYVSTGCPLELSYGPQVGQSDCEDRLRYLADKYSFRCQCRGCSQLNLSDLVL 352

Query: 365  DAFSCLNPRCSGVVLDEHVAFYENEEGSCLENVHSICSLEHRHPVDKMKREDIKKVGQLL 186
            +AF C+N  C+GVVL+  +   E  + +           +      K+   DI  V  L 
Sbjct: 353  NAFCCVNHNCAGVVLESTIINGETRKLNNFPRAPEKQKFDSHLQGHKLNIVDINDVASLA 412

Query: 185  FEQKDGTRCIDHGCCLNCGSYRSLEQSRIVSEKAKSNINRLQDTILTKHIPRNVLFDAVR 6
             +  + +  I  G CL+CGS+R L+ S     KA S I RLQ+ I++K I    L DA R
Sbjct: 413  LKFNNSSLHIHPGFCLHCGSHRDLDASHEAINKAWSYIKRLQEAIISKDISGTTLLDASR 472

Query: 5    A 3
            A
Sbjct: 473  A 473


>ref|XP_003522516.1| PREDICTED: uncharacterized protein LOC100794609 [Glycine max]
          Length = 784

 Score =  266 bits (681), Expect = 4e-69
 Identities = 147/303 (48%), Positives = 195/303 (64%), Gaps = 3/303 (0%)
 Frame = -3

Query: 902  ELTHNYGRMPSKIKLELHIYSVVLAYCLQRSCTVELPLDGNFASQLVILISQIRVNSMAV 723
            EL+H Y +M S+ KL+ HIY++VL YCLQ SC +   +D  F SQ+VI+ISQI+VN M V
Sbjct: 377  ELSHCYKQMSSERKLDSHIYAIVLLYCLQHSCGIMFSIDEVFISQVVIIISQIKVNCMTV 436

Query: 722  VHMKSQDSYRTLGQSGKGSPTEDTL--TTNIEQVRVGQAIYSTGSLFNHSCQPNIHAYFL 549
            V +KS D++   G+ G+  P +     T+N+EQVRVG+AIY  GSLFNHSCQPNIHAYFL
Sbjct: 437  VRLKSIDAHGLSGRFGE-FPFQSGAHSTSNVEQVRVGKAIYKAGSLFNHSCQPNIHAYFL 495

Query: 548  SRTLFIRSTEFVTAGYPLELSYGPQVGQWNFTERQQLLGDQYAFKCQCSGCSELNFSDLV 369
            SRTL++R+T  V A   LELSYGPQVG W+  +R   L D+YAF CQC+GCSE+N SD+V
Sbjct: 496  SRTLYLRTTNVVAAESQLELSYGPQVGLWDCKDRLNFLKDEYAFLCQCTGCSEVNLSDIV 555

Query: 368  RDAFSCLNPRCSGVVLDEHVAFYENEEGSCLENVHSICSLEHRHPVDKM-KREDIKKVGQ 192
             +AF C+N  CSG VL+  V   E ++            ++H    D + K  DI +V  
Sbjct: 556  LNAFHCVNTNCSGTVLESRVHDSEKQK------------IKHFPISDHVDKNADIYEVCL 603

Query: 191  LLFEQKDGTRCIDHGCCLNCGSYRSLEQSRIVSEKAKSNINRLQDTILTKHIPRNVLFDA 12
             +F+Q   +  I  G CL CGSY  LE SR    KA + I RLQD IL++ I    + DA
Sbjct: 604  RVFKQNGASIDIQPGYCLKCGSYCDLESSRAAVSKALTCIKRLQDAILSQQISSITISDA 663

Query: 11   VRA 3
            +++
Sbjct: 664  LKS 666


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