BLASTX nr result

ID: Coptis21_contig00015081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015081
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554892.1| PREDICTED: probable receptor-like protein ki...    93   8e-17
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    87   4e-15
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    87   6e-15
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14

>ref|XP_003554892.1| PREDICTED: probable receptor-like protein kinase At5g15080-like
           [Glycine max]
          Length = 680

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
 Frame = -3

Query: 518 KTRSTWASIIG--KKSVGADELSYIPPVMVDGKAIIHVNSSQFSDFNKKFENLVVGSFVG 345
           + R  W  +I   +       +SY+ P MV+G+  I +         + +EN ++   +G
Sbjct: 40  EARRLWVDVISENRNPTKGRMMSYVAPKMVEGQIEIEIEDEDIESEIRYWENALILYVLG 99

Query: 344 KRLNFTFVKDIVTRTWRIKNFVMKP----YGDTMFTFKFQSDDDQKAVLDIGSFHIAS*L 177
             LN   +K+ + R W   NFV  P    + D  F  +F+S DD + V+  G + I S  
Sbjct: 100 GDLNMNTIKNFMERNW---NFVQLPNLYYHDDGYFLLRFKSHDDMEVVVMKGPYTIRSMP 156

Query: 176 FVVRPWKIFVEAETRELKAIPIWVVVKGMPMEMWTKQGFSQLGSAIGVPMFTDRLT 9
            V++ W+     +   L+ IPIW+ +  +P+ +W ++  +++GSAIG PM TD  T
Sbjct: 157 VVLKEWRTDFSLKQDMLRTIPIWIKLPKLPLYLWGERSLNKIGSAIGTPMVTDECT 212


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
 Frame = -3

Query: 488 GKKSVGADE---LSYIPPVMVDGKAIIHVNSSQFSDFNKKFENLVVGSFVGKRLNFTFVK 318
           G K++G      L + PP M DG+  +      F D  + +++ +VG F+G++L +  V 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVN 172

Query: 317 DIVTRTWRIKNFVMKPYGDT-MFTFKFQSDDDQKAVLDIGSFHIAS*LFVVRPWKIFVEA 141
            I  R W     +     D   F F F S D    VL+   +H+A+   V++ W+  ++ 
Sbjct: 173 SIAKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQF 232

Query: 140 ETRELKAIPIWVVVKGMPMEMWTKQGFSQLGSAIGVPMFTDRLT 9
              +L  +P+WV +  +P+E WT +G S + SAIGVP+  D  T
Sbjct: 233 LKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTT 276


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
 Frame = -3

Query: 488 GKKSVGADE---LSYIPPVMVDGKAIIHVNSSQFSDFNKKFENLVVGSFVGKRLNFTFVK 318
           G K++G      L + PP M DG+  +      F D  + +++ +VG FVG++L +  V 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 317 DIVTRTWRIKNFVMKPYGDT-MFTFKFQSDDDQKAVLDIGSFHIAS*LFVVRPWKIFVEA 141
            I  R W           D   F F F S D    VL+   +H+A+   V++ W+  ++ 
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 140 ETRELKAIPIWVVVKGMPMEMWTKQGFSQLGSAIGVPMFTD 18
              +L  +P+WV +  +P+E WT +G S + SAIGVP+  D
Sbjct: 233 LKDDLATVPVWVWLYNVPLEYWTIEGLSCVASAIGVPLHAD 273


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
 Frame = -3

Query: 488 GKKSVGADE---LSYIPPVMVDGKAIIHVNSSQFSDFNKKFENLVVGSFVGKRLNFTFVK 318
           G K++G      L + PP M DG+  +      F D  + +++ +VG FVG++L +  V 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 317 DIVTRTWRIKNFVMKPYGDT-MFTFKFQSDDDQKAVLDIGSFHIAS*LFVVRPWKIFVEA 141
            I  R W           D   F F F S D    VL+   +H+A+   V++ W+  ++ 
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 140 ETRELKAIPIWVVVKGMPMEMWTKQGFSQLGSAIGVPMFTDRLT 9
              +   +P+WV +  +P+E WT +G S + SAIGVP+  D  T
Sbjct: 233 LKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTT 276


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
 Frame = -3

Query: 488 GKKSVGADE---LSYIPPVMVDGKAIIHVNSSQFSDFNKKFENLVVGSFVGKRLNFTFVK 318
           G K++G      L + PP   DG+  +      F D  + +++ +VG FVG++L +  V 
Sbjct: 113 GSKTLGISSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 317 DIVTRTWRIKNFVMKPYGDT-MFTFKFQSDDDQKAVLDIGSFHIAS*LFVVRPWKIFVEA 141
            I  R W           D   F F F S D    VL+   +H+A+   V++ W+  ++ 
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 140 ETRELKAIPIWVVVKGMPMEMWTKQGFSQLGSAIGVPMFTDRLT 9
              +L  +P+WV +  +P+E WT +G S + SA+GVP+  D  T
Sbjct: 233 LKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTT 276


Top