BLASTX nr result

ID: Coptis21_contig00015079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015079
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucu...   221   1e-55
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]   219   5e-55
ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    216   4e-54
ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis ...   214   2e-53
ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thali...   213   3e-53

>ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucumis sativus]
          Length = 446

 Score =  221 bits (562), Expect = 1e-55
 Identities = 128/228 (56%), Positives = 155/228 (67%), Gaps = 2/228 (0%)
 Frame = -1

Query: 680 KDVREAVEEANKMN--SNKQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTENPSF 507
           KDVR+AVEEA K+   +NK+TVLF+DEVHRFNKSQQDSFLPVIEDG+I+F+GATTENPSF
Sbjct: 78  KDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDGSIIFLGATTENPSF 137

Query: 506 HLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXXXXXXXXXXXXFLSLN 327
           HLITPLLSR RVL LN L+P  +  +L+RAVDD +KGL ++              F++ N
Sbjct: 138 HLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLART-ISMAVQIGEDAIDFIAAN 196

Query: 326 SDGDARVXXXXXXXXXXXXXARELSSKDKGTLASFQFEDVTFDNSSLVPFNDLGSGENGV 147
            DGDAR                E+S+      A+ +   V  D+ ++    D       V
Sbjct: 197 CDGDARTALNAL----------EISA----ITAAARTNSVQIDDRNV---EDPDENTTNV 239

Query: 146 GSLVAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSMRGSDANA 3
            S VAVVTLDD KEALQCKH+AYD+AGEEHYNLISALHKSMRG DA+A
Sbjct: 240 ESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADA 287


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score =  219 bits (557), Expect = 5e-55
 Identities = 127/228 (55%), Positives = 154/228 (67%), Gaps = 2/228 (0%)
 Frame = -1

Query: 680 KDVREAVEEANKMN--SNKQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTENPSF 507
           KDVR+AVEEA K+   +NK+TVLF+DEVHRFNKSQQDSFLPVIEDG+I+F+GATTENPSF
Sbjct: 152 KDVRDAVEEARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDGSIIFLGATTENPSF 211

Query: 506 HLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXXXXXXXXXXXXFLSLN 327
           HLITPLLSR RVL LN L+P  +  +L+RAVDD +KGL ++              F++ N
Sbjct: 212 HLITPLLSRSRVLTLNPLKPHHVTLILKRAVDDSDKGLART-ISMGVQIGEDAIDFIAAN 270

Query: 326 SDGDARVXXXXXXXXXXXXXARELSSKDKGTLASFQFEDVTFDNSSLVPFNDLGSGENGV 147
            DGDAR                E+S+      A+ +   V  D+ ++    D        
Sbjct: 271 CDGDARTALNAL----------EISA----ITAAARTNSVQIDDRNV---EDPDENTTNF 313

Query: 146 GSLVAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSMRGSDANA 3
            S VAVVTLDD KEALQCKH+AYD+AGEEHYNLISALHKSMRG DA+A
Sbjct: 314 ESSVAVVTLDDVKEALQCKHIAYDKAGEEHYNLISALHKSMRGCDADA 361


>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  216 bits (549), Expect = 4e-54
 Identities = 132/234 (56%), Positives = 149/234 (63%), Gaps = 8/234 (3%)
 Frame = -1

Query: 680 KDVREAVEEANKMN-----SNKQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTEN 516
           KDVR+ VEEA K+      ++K+T+LFVDEVHRFNKSQQDSFLPVIEDG+IVFIGATTEN
Sbjct: 186 KDVRDVVEEARKIKVSKNMNSKRTLLFVDEVHRFNKSQQDSFLPVIEDGSIVFIGATTEN 245

Query: 515 PSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXXXXXXXXXXXXFL 336
           PSFHLITPLLSRCRVL LN L+P  +  LL RAV D  +GL  S              FL
Sbjct: 246 PSFHLITPLLSRCRVLTLNPLQPSHVASLLNRAVADTGRGLAWSVGGASIEVSDDAIDFL 305

Query: 335 SLNSDGDARVXXXXXXXXXXXXXARELSSKDKGTLASFQFEDVTF---DNSSLVPFNDLG 165
           S + DGDARV                        L + +   VT       +LV  N +G
Sbjct: 306 SSHCDGDARV-----------------------ALNALEISAVTAAARHGENLVENNGVG 342

Query: 164 SGENGVGSLVAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSMRGSDANA 3
           S      S V  VTLDDAKEALQ KHLAYD+AGEEHYNLISALHKSMRGSDA+A
Sbjct: 343 S------SQVTTVTLDDAKEALQSKHLAYDKAGEEHYNLISALHKSMRGSDADA 390


>ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336557|gb|EFH66974.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score =  214 bits (544), Expect = 2e-53
 Identities = 129/228 (56%), Positives = 150/228 (65%), Gaps = 2/228 (0%)
 Frame = -1

Query: 680 KDVREAVEEANKMN--SNKQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTENPSF 507
           KDVR+AVE A ++N    K+TVLF+DEVHRFNKSQQDSFLPVIEDG+I+FIGATTENPSF
Sbjct: 180 KDVRDAVESAKRLNLEGKKRTVLFMDEVHRFNKSQQDSFLPVIEDGSILFIGATTENPSF 239

Query: 506 HLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXXXXXXXXXXXXFLSLN 327
           HLITPLLSRCRVL LN L+P  +  LLRRAVDD E+GL  S              FL+ N
Sbjct: 240 HLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGLSNS-----VEVDDSVIEFLAYN 294

Query: 326 SDGDARVXXXXXXXXXXXXXARELSSKDKGTLASFQFEDVTFDNSSLVPFNDLGSGENGV 147
            DGDARV               E+S+    T+A+ +                 GS     
Sbjct: 295 CDGDARVALNAL----------EISA----TMATAR----------------AGSD---- 320

Query: 146 GSLVAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSMRGSDANA 3
               AVV++DDAKEALQCKHLAYD+AG++HYNLISALHKSMRG DANA
Sbjct: 321 ----AVVSIDDAKEALQCKHLAYDKAGDQHYNLISALHKSMRGGDANA 364


>ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
           gi|2829884|gb|AAC00592.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192391|gb|AEE30512.1|
           AAA-type ATPase-like protein [Arabidopsis thaliana]
          Length = 525

 Score =  213 bits (542), Expect = 3e-53
 Identities = 127/228 (55%), Positives = 145/228 (63%), Gaps = 2/228 (0%)
 Frame = -1

Query: 680 KDVREAVEEANKMN--SNKQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTENPSF 507
           KDVR+AVE A ++N    K+TVLF+DEVHRFNKSQQD+FLPVIEDG+I+FIGATTENPSF
Sbjct: 180 KDVRDAVESAKRLNLEGRKRTVLFMDEVHRFNKSQQDTFLPVIEDGSILFIGATTENPSF 239

Query: 506 HLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGEKGLRKSXXXXXXXXXXXXXXFLSLN 327
           HLITPLLSRCRVL LN L+P  +  LLRRAVDD E+GL  S              FL+ N
Sbjct: 240 HLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGLPNS-----VEVDDSVIEFLANN 294

Query: 326 SDGDARVXXXXXXXXXXXXXARELSSKDKGTLASFQFEDVTFDNSSLVPFNDLGSGENGV 147
            DGDARV               E+S+    T A                           
Sbjct: 295 CDGDARVALNAL----------EISATMATTRAGTD------------------------ 320

Query: 146 GSLVAVVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSMRGSDANA 3
               AVV++DDAKEALQCKHLAYD+AGE+HYNLISALHKSMRG DANA
Sbjct: 321 ----AVVSIDDAKEALQCKHLAYDKAGEQHYNLISALHKSMRGGDANA 364


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