BLASTX nr result

ID: Coptis21_contig00015070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015070
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322754.1| predicted protein [Populus trichocarpa] gi|2...   218   1e-79
ref|XP_002309274.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-76
emb|CBI39093.3| unnamed protein product [Vitis vinifera]              206   2e-75
ref|XP_002268495.1| PREDICTED: probable E3 ubiquitin-protein lig...   206   2e-75
ref|XP_004165113.1| PREDICTED: probable E3 ubiquitin-protein lig...   208   2e-70

>ref|XP_002322754.1| predicted protein [Populus trichocarpa] gi|222867384|gb|EEF04515.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  218 bits (556), Expect(2) = 1e-79
 Identities = 105/167 (62%), Positives = 132/167 (79%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1   ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSE-STKVVDDGRALT 177
           ETF EYL+G+Q G LDKC HVEYK+LKKVLK CR+      SCND +   +  +   +L+
Sbjct: 5   ETFMEYLHGEQEGCLDKCAHVEYKRLKKVLKKCRSQGPPSTSCNDEQLQERDSEQNHSLS 64

Query: 178 HYFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTND 357
            +   +SCP+CDQ FFSEL++EASDIAG FSSRVR LLHLH++ G+QRY LRLR CF ND
Sbjct: 65  QFCHCQSCPLCDQMFFSELMREASDIAGCFSSRVRHLLHLHVARGMQRYKLRLRQCFIND 124

Query: 358 KELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498
           +++M  + RMLIEYVTMNA+A+RKILKKYDKVH SING+NF++KMR+
Sbjct: 125 QQIMVEEGRMLIEYVTMNAIAIRKILKKYDKVHCSINGKNFKSKMRS 171



 Score =  104 bits (260), Expect(2) = 1e-79
 Identities = 47/75 (62%), Positives = 61/75 (81%)
 Frame = +3

Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677
           +HIELLQSPWLIELGAFY+NF+  +GG+   F ++FSCDL++ +PVMTL++ +  KLEY 
Sbjct: 172 EHIELLQSPWLIELGAFYLNFDGIDGGEFSEFCSRFSCDLSATEPVMTLMLPNYTKLEYG 231

Query: 678 LKCAICLDTVFNSYA 722
           L CAICL+ VFN YA
Sbjct: 232 LTCAICLEMVFNPYA 246


>ref|XP_002309274.1| predicted protein [Populus trichocarpa] gi|222855250|gb|EEE92797.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  202 bits (514), Expect(2) = 2e-76
 Identities = 100/171 (58%), Positives = 127/171 (74%), Gaps = 5/171 (2%)
 Frame = +1

Query: 1   ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGR---- 168
           +TF +YL GDQ G L KC HVEYK+L +VLK+CR+  +   SC + +     D+G     
Sbjct: 5   DTFMQYLQGDQTGNLVKCAHVEYKRLNEVLKNCRSQGSASASCKNEQQK---DEGNNELS 61

Query: 169 -ALTHYFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHC 345
             L+ +   ESCP+CDQ FFSEL++EAS IAG FSSRVR LLHLH++ G+QRY LRLR C
Sbjct: 62  SGLSQFCHCESCPLCDQIFFSELMREASHIAGCFSSRVRHLLHLHVARGIQRYKLRLRQC 121

Query: 346 FTNDKELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498
           F ND++ MA + RMLIEYVTMN +A+RKILKKYDKVH S+NG NF++KM+A
Sbjct: 122 FKNDQQTMAEEGRMLIEYVTMNTIAIRKILKKYDKVHCSVNGNNFKSKMQA 172



 Score =  110 bits (275), Expect(2) = 2e-76
 Identities = 51/75 (68%), Positives = 61/75 (81%)
 Frame = +3

Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677
           +HIELLQSPWLIELGAFY+NF+  +GG+   F +QFSCDL   +PVMTL + +S KLEYS
Sbjct: 173 EHIELLQSPWLIELGAFYLNFDGIDGGEFSEFCSQFSCDLNGTEPVMTLTLPNSTKLEYS 232

Query: 678 LKCAICLDTVFNSYA 722
           L CAICL+TVFN YA
Sbjct: 233 LTCAICLETVFNPYA 247


>emb|CBI39093.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  206 bits (524), Expect(2) = 2e-75
 Identities = 106/166 (63%), Positives = 130/166 (78%)
 Frame = +1

Query: 1   ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGRALTH 180
           ETF EYL+G+Q  FLDK  HVEYK+LKKVLK+CR+   L  S    E      D  AL+ 
Sbjct: 5   ETFMEYLHGEQESFLDKFSHVEYKRLKKVLKTCRS---LHGSYGADEQEDENSD--ALSR 59

Query: 181 YFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTNDK 360
             +YESCP+CD+ FFSEL+KEASDIAG FSSRVR LLHLHI+ G+QRY+L LR CF ND+
Sbjct: 60  LCRYESCPLCDKIFFSELMKEASDIAGCFSSRVRHLLHLHIATGMQRYVLLLRQCFKNDR 119

Query: 361 ELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498
           + +A + RMLI+YVTMNA+A+RKILKKYDKVHSS+NGR+F+ KM+A
Sbjct: 120 QTIAEEGRMLIDYVTMNAIAIRKILKKYDKVHSSVNGRDFKRKMQA 165



 Score =  103 bits (256), Expect(2) = 2e-75
 Identities = 48/75 (64%), Positives = 62/75 (82%)
 Frame = +3

Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677
           +HIELLQSPWLIELGAFY+NFN ++  +S   S QFSCDL++ +PVMTL + DS+KLE +
Sbjct: 166 KHIELLQSPWLIELGAFYLNFNESDEEESCKISCQFSCDLSTTEPVMTLRLPDSMKLECN 225

Query: 678 LKCAICLDTVFNSYA 722
           L C+ICLDT+FN +A
Sbjct: 226 LTCSICLDTLFNPHA 240


>ref|XP_002268495.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1-like
           [Vitis vinifera]
          Length = 330

 Score =  206 bits (524), Expect(2) = 2e-75
 Identities = 106/166 (63%), Positives = 130/166 (78%)
 Frame = +1

Query: 1   ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGRALTH 180
           ETF EYL+G+Q  FLDK  HVEYK+LKKVLK+CR+   L  S    E      D  AL+ 
Sbjct: 5   ETFMEYLHGEQESFLDKFSHVEYKRLKKVLKTCRS---LHGSYGADEQEDENSD--ALSR 59

Query: 181 YFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTNDK 360
             +YESCP+CD+ FFSEL+KEASDIAG FSSRVR LLHLHI+ G+QRY+L LR CF ND+
Sbjct: 60  LCRYESCPLCDKIFFSELMKEASDIAGCFSSRVRHLLHLHIATGMQRYVLLLRQCFKNDR 119

Query: 361 ELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498
           + +A + RMLI+YVTMNA+A+RKILKKYDKVHSS+NGR+F+ KM+A
Sbjct: 120 QTIAEEGRMLIDYVTMNAIAIRKILKKYDKVHSSVNGRDFKRKMQA 165



 Score =  103 bits (256), Expect(2) = 2e-75
 Identities = 48/75 (64%), Positives = 62/75 (82%)
 Frame = +3

Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677
           +HIELLQSPWLIELGAFY+NFN ++  +S   S QFSCDL++ +PVMTL + DS+KLE +
Sbjct: 166 KHIELLQSPWLIELGAFYLNFNESDEEESCKISCQFSCDLSTTEPVMTLRLPDSMKLECN 225

Query: 678 LKCAICLDTVFNSYA 722
           L C+ICLDT+FN +A
Sbjct: 226 LTCSICLDTLFNPHA 240


>ref|XP_004165113.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis
           sativus]
          Length = 321

 Score =  208 bits (529), Expect(2) = 2e-70
 Identities = 103/166 (62%), Positives = 126/166 (75%)
 Frame = +1

Query: 1   ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGRALTH 180
           ETF EYL+GD+  FLDKC HVEYK+LKKVLKSCR C+ L DSC++    K          
Sbjct: 5   ETFMEYLHGDREWFLDKCSHVEYKRLKKVLKSCRTCR-LNDSCSNECECK---------- 53

Query: 181 YFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTNDK 360
                SCPVCDQ FFSEL++EASDIAG F++RVR LLHLH++ G++RYM RL HCF  D+
Sbjct: 54  -----SCPVCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMSRLVHCFKTDQ 108

Query: 361 ELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498
             +  + RMLIEYVTMNA+A+RKILKKYDKVHSS+NG+NF+ +MRA
Sbjct: 109 TTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRA 154



 Score = 84.3 bits (207), Expect(2) = 2e-70
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = +3

Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGD--SGVFSNQFSCDLTSDQPVMTLLISDSLKLE 671
           +H+ELLQSPWLIELGAF +NF  +  GD  SG FS  FS ++ +  P MTL++ DS+KLE
Sbjct: 155 EHMELLQSPWLIELGAFCLNFKGSKDGDYPSG-FSTHFSFNVDA-APTMTLMLPDSIKLE 212

Query: 672 YSLKCAICLDTVFNSYA 722
           Y L C ICL+T+F+ YA
Sbjct: 213 YDLTCPICLETLFDPYA 229


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