BLASTX nr result
ID: Coptis21_contig00015070
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015070 (724 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322754.1| predicted protein [Populus trichocarpa] gi|2... 218 1e-79 ref|XP_002309274.1| predicted protein [Populus trichocarpa] gi|2... 202 2e-76 emb|CBI39093.3| unnamed protein product [Vitis vinifera] 206 2e-75 ref|XP_002268495.1| PREDICTED: probable E3 ubiquitin-protein lig... 206 2e-75 ref|XP_004165113.1| PREDICTED: probable E3 ubiquitin-protein lig... 208 2e-70 >ref|XP_002322754.1| predicted protein [Populus trichocarpa] gi|222867384|gb|EEF04515.1| predicted protein [Populus trichocarpa] Length = 338 Score = 218 bits (556), Expect(2) = 1e-79 Identities = 105/167 (62%), Positives = 132/167 (79%), Gaps = 1/167 (0%) Frame = +1 Query: 1 ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSE-STKVVDDGRALT 177 ETF EYL+G+Q G LDKC HVEYK+LKKVLK CR+ SCND + + + +L+ Sbjct: 5 ETFMEYLHGEQEGCLDKCAHVEYKRLKKVLKKCRSQGPPSTSCNDEQLQERDSEQNHSLS 64 Query: 178 HYFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTND 357 + +SCP+CDQ FFSEL++EASDIAG FSSRVR LLHLH++ G+QRY LRLR CF ND Sbjct: 65 QFCHCQSCPLCDQMFFSELMREASDIAGCFSSRVRHLLHLHVARGMQRYKLRLRQCFIND 124 Query: 358 KELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498 +++M + RMLIEYVTMNA+A+RKILKKYDKVH SING+NF++KMR+ Sbjct: 125 QQIMVEEGRMLIEYVTMNAIAIRKILKKYDKVHCSINGKNFKSKMRS 171 Score = 104 bits (260), Expect(2) = 1e-79 Identities = 47/75 (62%), Positives = 61/75 (81%) Frame = +3 Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677 +HIELLQSPWLIELGAFY+NF+ +GG+ F ++FSCDL++ +PVMTL++ + KLEY Sbjct: 172 EHIELLQSPWLIELGAFYLNFDGIDGGEFSEFCSRFSCDLSATEPVMTLMLPNYTKLEYG 231 Query: 678 LKCAICLDTVFNSYA 722 L CAICL+ VFN YA Sbjct: 232 LTCAICLEMVFNPYA 246 >ref|XP_002309274.1| predicted protein [Populus trichocarpa] gi|222855250|gb|EEE92797.1| predicted protein [Populus trichocarpa] Length = 339 Score = 202 bits (514), Expect(2) = 2e-76 Identities = 100/171 (58%), Positives = 127/171 (74%), Gaps = 5/171 (2%) Frame = +1 Query: 1 ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGR---- 168 +TF +YL GDQ G L KC HVEYK+L +VLK+CR+ + SC + + D+G Sbjct: 5 DTFMQYLQGDQTGNLVKCAHVEYKRLNEVLKNCRSQGSASASCKNEQQK---DEGNNELS 61 Query: 169 -ALTHYFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHC 345 L+ + ESCP+CDQ FFSEL++EAS IAG FSSRVR LLHLH++ G+QRY LRLR C Sbjct: 62 SGLSQFCHCESCPLCDQIFFSELMREASHIAGCFSSRVRHLLHLHVARGIQRYKLRLRQC 121 Query: 346 FTNDKELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498 F ND++ MA + RMLIEYVTMN +A+RKILKKYDKVH S+NG NF++KM+A Sbjct: 122 FKNDQQTMAEEGRMLIEYVTMNTIAIRKILKKYDKVHCSVNGNNFKSKMQA 172 Score = 110 bits (275), Expect(2) = 2e-76 Identities = 51/75 (68%), Positives = 61/75 (81%) Frame = +3 Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677 +HIELLQSPWLIELGAFY+NF+ +GG+ F +QFSCDL +PVMTL + +S KLEYS Sbjct: 173 EHIELLQSPWLIELGAFYLNFDGIDGGEFSEFCSQFSCDLNGTEPVMTLTLPNSTKLEYS 232 Query: 678 LKCAICLDTVFNSYA 722 L CAICL+TVFN YA Sbjct: 233 LTCAICLETVFNPYA 247 >emb|CBI39093.3| unnamed protein product [Vitis vinifera] Length = 332 Score = 206 bits (524), Expect(2) = 2e-75 Identities = 106/166 (63%), Positives = 130/166 (78%) Frame = +1 Query: 1 ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGRALTH 180 ETF EYL+G+Q FLDK HVEYK+LKKVLK+CR+ L S E D AL+ Sbjct: 5 ETFMEYLHGEQESFLDKFSHVEYKRLKKVLKTCRS---LHGSYGADEQEDENSD--ALSR 59 Query: 181 YFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTNDK 360 +YESCP+CD+ FFSEL+KEASDIAG FSSRVR LLHLHI+ G+QRY+L LR CF ND+ Sbjct: 60 LCRYESCPLCDKIFFSELMKEASDIAGCFSSRVRHLLHLHIATGMQRYVLLLRQCFKNDR 119 Query: 361 ELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498 + +A + RMLI+YVTMNA+A+RKILKKYDKVHSS+NGR+F+ KM+A Sbjct: 120 QTIAEEGRMLIDYVTMNAIAIRKILKKYDKVHSSVNGRDFKRKMQA 165 Score = 103 bits (256), Expect(2) = 2e-75 Identities = 48/75 (64%), Positives = 62/75 (82%) Frame = +3 Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677 +HIELLQSPWLIELGAFY+NFN ++ +S S QFSCDL++ +PVMTL + DS+KLE + Sbjct: 166 KHIELLQSPWLIELGAFYLNFNESDEEESCKISCQFSCDLSTTEPVMTLRLPDSMKLECN 225 Query: 678 LKCAICLDTVFNSYA 722 L C+ICLDT+FN +A Sbjct: 226 LTCSICLDTLFNPHA 240 >ref|XP_002268495.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1-like [Vitis vinifera] Length = 330 Score = 206 bits (524), Expect(2) = 2e-75 Identities = 106/166 (63%), Positives = 130/166 (78%) Frame = +1 Query: 1 ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGRALTH 180 ETF EYL+G+Q FLDK HVEYK+LKKVLK+CR+ L S E D AL+ Sbjct: 5 ETFMEYLHGEQESFLDKFSHVEYKRLKKVLKTCRS---LHGSYGADEQEDENSD--ALSR 59 Query: 181 YFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTNDK 360 +YESCP+CD+ FFSEL+KEASDIAG FSSRVR LLHLHI+ G+QRY+L LR CF ND+ Sbjct: 60 LCRYESCPLCDKIFFSELMKEASDIAGCFSSRVRHLLHLHIATGMQRYVLLLRQCFKNDR 119 Query: 361 ELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498 + +A + RMLI+YVTMNA+A+RKILKKYDKVHSS+NGR+F+ KM+A Sbjct: 120 QTIAEEGRMLIDYVTMNAIAIRKILKKYDKVHSSVNGRDFKRKMQA 165 Score = 103 bits (256), Expect(2) = 2e-75 Identities = 48/75 (64%), Positives = 62/75 (82%) Frame = +3 Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGDSGVFSNQFSCDLTSDQPVMTLLISDSLKLEYS 677 +HIELLQSPWLIELGAFY+NFN ++ +S S QFSCDL++ +PVMTL + DS+KLE + Sbjct: 166 KHIELLQSPWLIELGAFYLNFNESDEEESCKISCQFSCDLSTTEPVMTLRLPDSMKLECN 225 Query: 678 LKCAICLDTVFNSYA 722 L C+ICLDT+FN +A Sbjct: 226 LTCSICLDTLFNPHA 240 >ref|XP_004165113.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis sativus] Length = 321 Score = 208 bits (529), Expect(2) = 2e-70 Identities = 103/166 (62%), Positives = 126/166 (75%) Frame = +1 Query: 1 ETFTEYLNGDQVGFLDKCYHVEYKQLKKVLKSCRNCKALQDSCNDSESTKVVDDGRALTH 180 ETF EYL+GD+ FLDKC HVEYK+LKKVLKSCR C+ L DSC++ K Sbjct: 5 ETFMEYLHGDREWFLDKCSHVEYKRLKKVLKSCRTCR-LNDSCSNECECK---------- 53 Query: 181 YFQYESCPVCDQKFFSELIKEASDIAGYFSSRVRRLLHLHISNGVQRYMLRLRHCFTNDK 360 SCPVCDQ FFSEL++EASDIAG F++RVR LLHLH++ G++RYM RL HCF D+ Sbjct: 54 -----SCPVCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMSRLVHCFKTDQ 108 Query: 361 ELMAYQVRMLIEYVTMNAVAMRKILKKYDKVHSSINGRNFRTKMRA 498 + + RMLIEYVTMNA+A+RKILKKYDKVHSS+NG+NF+ +MRA Sbjct: 109 TTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRA 154 Score = 84.3 bits (207), Expect(2) = 2e-70 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%) Frame = +3 Query: 498 QHIELLQSPWLIELGAFYINFNVNNGGD--SGVFSNQFSCDLTSDQPVMTLLISDSLKLE 671 +H+ELLQSPWLIELGAF +NF + GD SG FS FS ++ + P MTL++ DS+KLE Sbjct: 155 EHMELLQSPWLIELGAFCLNFKGSKDGDYPSG-FSTHFSFNVDA-APTMTLMLPDSIKLE 212 Query: 672 YSLKCAICLDTVFNSYA 722 Y L C ICL+T+F+ YA Sbjct: 213 YDLTCPICLETLFDPYA 229