BLASTX nr result

ID: Coptis21_contig00015038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015038
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66568.1| hypothetical protein VITISV_039539 [Vitis vinifera]    65   2e-21
ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266...    65   2e-21
emb|CBI37358.3| unnamed protein product [Vitis vinifera]               65   2e-21
emb|CAN74654.1| hypothetical protein VITISV_022993 [Vitis vinifera]    65   2e-21
ref|XP_002868073.1| hypothetical protein ARALYDRAFT_329795 [Arab...    61   2e-19

>emb|CAN66568.1| hypothetical protein VITISV_039539 [Vitis vinifera]
          Length = 2321

 Score = 65.5 bits (158), Expect(2) = 2e-21
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +1

Query: 124 LEFSSNAVESCSILRRDNVWSEATSSESVDLILKSVGQNDM 246
           +EFSS+A ESCSI RR+NVWSEATSSESV+++LKSVGQ ++
Sbjct: 78  IEFSSSAAESCSISRRNNVWSEATSSESVEMLLKSVGQEEI 118



 Score = 62.0 bits (149), Expect(2) = 2e-21
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 3   DSLQTRLRFDSLVDSEVLLGIHGQEENNWIEDFSRESSGL 122
           DSLQ  LRFDSLV++EV LGI  QE+N WIEDFSR SSG+
Sbjct: 39  DSLQGHLRFDSLVETEVFLGIESQEDNQWIEDFSRGSSGI 78


>ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266068 [Vitis vinifera]
          Length = 2292

 Score = 65.5 bits (158), Expect(2) = 2e-21
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +1

Query: 124 LEFSSNAVESCSILRRDNVWSEATSSESVDLILKSVGQNDM 246
           +EFSS+A ESCSI RR+NVWSEATSSESV+++LKSVGQ ++
Sbjct: 78  IEFSSSAAESCSISRRNNVWSEATSSESVEMLLKSVGQEEI 118



 Score = 62.0 bits (149), Expect(2) = 2e-21
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 3   DSLQTRLRFDSLVDSEVLLGIHGQEENNWIEDFSRESSGL 122
           DSLQ  LRFDSLV++EV LGI  QE+N WIEDFSR SSG+
Sbjct: 39  DSLQGHLRFDSLVETEVFLGIESQEDNQWIEDFSRGSSGI 78


>emb|CBI37358.3| unnamed protein product [Vitis vinifera]
          Length = 1979

 Score = 65.5 bits (158), Expect(2) = 2e-21
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +1

Query: 124 LEFSSNAVESCSILRRDNVWSEATSSESVDLILKSVGQNDM 246
           +EFSS+A ESCSI RR+NVWSEATSSESV+++LKSVGQ ++
Sbjct: 125 IEFSSSAAESCSISRRNNVWSEATSSESVEMLLKSVGQEEI 165



 Score = 62.0 bits (149), Expect(2) = 2e-21
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 3   DSLQTRLRFDSLVDSEVLLGIHGQEENNWIEDFSRESSGL 122
           DSLQ  LRFDSLV++EV LGI  QE+N WIEDFSR SSG+
Sbjct: 86  DSLQGHLRFDSLVETEVFLGIESQEDNQWIEDFSRGSSGI 125


>emb|CAN74654.1| hypothetical protein VITISV_022993 [Vitis vinifera]
          Length = 644

 Score = 65.5 bits (158), Expect(2) = 2e-21
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +1

Query: 124 LEFSSNAVESCSILRRDNVWSEATSSESVDLILKSVGQNDM 246
           +EFSS+A ESCSI RR+NVWSEATSSESV+++LKSVGQ ++
Sbjct: 78  IEFSSSAAESCSISRRNNVWSEATSSESVEILLKSVGQEEI 118



 Score = 62.0 bits (149), Expect(2) = 2e-21
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 3   DSLQTRLRFDSLVDSEVLLGIHGQEENNWIEDFSRESSGL 122
           DSLQ  LRFDSLV++EV LGI  QE+N WIEDFSR SSG+
Sbjct: 39  DSLQGHLRFDSLVETEVFLGIESQEDNQWIEDFSRGSSGI 78


>ref|XP_002868073.1| hypothetical protein ARALYDRAFT_329795 [Arabidopsis lyrata subsp.
           lyrata] gi|297313909|gb|EFH44332.1| hypothetical protein
           ARALYDRAFT_329795 [Arabidopsis lyrata subsp. lyrata]
          Length = 1744

 Score = 61.2 bits (147), Expect(2) = 2e-19
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   DSLQTRLRFDSLVDSEVLLGIHGQEENNWIEDFSRESSGL 122
           D+L T LRFDSL +SE  LGI G E+NNWIEDFSR SSG+
Sbjct: 39  DTLNTHLRFDSLGESEAFLGIEGNEDNNWIEDFSRGSSGI 78



 Score = 58.9 bits (141), Expect(2) = 2e-19
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = +1

Query: 130 FSSNAVESCSILRRDNVWSEATSSESVDLILKSVGQNDMKIME 258
           FSS A ESC+I R +NVWSEATSSESV+++L SVGQ+++ + E
Sbjct: 80  FSSGATESCAIPRHNNVWSEATSSESVEMLLNSVGQDEVIVRE 122


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