BLASTX nr result

ID: Coptis21_contig00015035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015035
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466941.1| hypothetical protein SORBIDRAFT_01g017140 [S...   190   2e-46
ref|XP_002880044.1| electron-transfer flavoprotein:ubiquinone ox...   187   1e-45
ref|NP_181868.1| electron-transferring-flavoprotein dehydrogenas...   187   1e-45
ref|XP_002327878.1| predicted protein [Populus trichocarpa] gi|2...   186   4e-45
ref|XP_003546985.1| PREDICTED: electron transfer flavoprotein-ub...   184   9e-45

>ref|XP_002466941.1| hypothetical protein SORBIDRAFT_01g017140 [Sorghum bicolor]
           gi|241920795|gb|EER93939.1| hypothetical protein
           SORBIDRAFT_01g017140 [Sorghum bicolor]
          Length = 586

 Score =  190 bits (482), Expect = 2e-46
 Identities = 83/96 (86%), Positives = 88/96 (91%)
 Frame = -3

Query: 644 SLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYEYIKDDEGQPKLQI 465
           SLYRSNTNH HDQP HLRLRDP IPE +N+P YAGPESRYCPARVYEY+ D++G PKLQI
Sbjct: 491 SLYRSNTNHEHDQPPHLRLRDPTIPEQVNVPLYAGPESRYCPARVYEYVSDEKGDPKLQI 550

Query: 464 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 357
           NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 551 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 586


>ref|XP_002880044.1| electron-transfer flavoprotein:ubiquinone oxidoreductase
           [Arabidopsis lyrata subsp. lyrata]
           gi|297325883|gb|EFH56303.1| electron-transfer
           flavoprotein:ubiquinone oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  187 bits (475), Expect = 1e-45
 Identities = 82/96 (85%), Positives = 88/96 (91%)
 Frame = -3

Query: 644 SLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYEYIKDDEGQPKLQI 465
           SLYRSNTNH HDQP+HLRLRDP IPE +N P YA PESRYCPARVYEYI+D+EG+PKLQI
Sbjct: 534 SLYRSNTNHDHDQPSHLRLRDPKIPEKVNFPEYAAPESRYCPARVYEYIEDEEGKPKLQI 593

Query: 464 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 357
           NAQNCLHCKACDIKDPKQNIEWTVPEGGGGP Y +M
Sbjct: 594 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPAYSLM 629


>ref|NP_181868.1| electron-transferring-flavoprotein dehydrogenase [Arabidopsis
           thaliana] gi|2288999|gb|AAB64328.1| putative electron
           transfer flavoprotein ubiquinone oxidoreductase
           [Arabidopsis thaliana] gi|330255167|gb|AEC10261.1|
           electron-transferring-flavoprotein dehydrogenase
           [Arabidopsis thaliana]
          Length = 633

 Score =  187 bits (475), Expect = 1e-45
 Identities = 82/96 (85%), Positives = 88/96 (91%)
 Frame = -3

Query: 644 SLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYEYIKDDEGQPKLQI 465
           SLYRSNTNH HDQP+HLRLRDP IPE +N P YA PESRYCPARVYEYI+D+EG+PKLQI
Sbjct: 538 SLYRSNTNHDHDQPSHLRLRDPKIPEKVNFPEYAAPESRYCPARVYEYIEDEEGKPKLQI 597

Query: 464 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 357
           NAQNCLHCKACDIKDPKQNIEWTVPEGGGGP Y +M
Sbjct: 598 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPAYSLM 633


>ref|XP_002327878.1| predicted protein [Populus trichocarpa] gi|222837287|gb|EEE75666.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  186 bits (471), Expect = 4e-45
 Identities = 83/96 (86%), Positives = 87/96 (90%)
 Frame = -3

Query: 644 SLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYEYIKDDEGQPKLQI 465
           SL+RSNTNH HDQPAHLRL+DP IPE +NLP YAGPESRYCPARVYEYI D+  Q KLQI
Sbjct: 329 SLHRSNTNHDHDQPAHLRLKDPKIPETLNLPEYAGPESRYCPARVYEYISDENSQLKLQI 388

Query: 464 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 357
           NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 389 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYSVM 424


>ref|XP_003546985.1| PREDICTED: electron transfer flavoprotein-ubiquinone
           oxidoreductase, mitochondrial-like [Glycine max]
          Length = 617

 Score =  184 bits (468), Expect = 9e-45
 Identities = 82/96 (85%), Positives = 87/96 (90%)
 Frame = -3

Query: 644 SLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRYCPARVYEYIKDDEGQPKLQI 465
           SL+RSNTNH HDQP HLRLRDP IPEL+NLP YA PESRYCPARVYEY+ D++ Q KLQI
Sbjct: 522 SLHRSNTNHEHDQPPHLRLRDPKIPELVNLPVYAAPESRYCPARVYEYVADEQNQMKLQI 581

Query: 464 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 357
           NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 582 NAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYSVM 617


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