BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015030
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...    84   1e-17
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]         84   2e-16
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...    80   2e-15
ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleop...    80   3e-15
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-14

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score = 84.3 bits (207), Expect(2) = 1e-17
 Identities = 32/45 (71%), Positives = 42/45 (93%)
 Frame = +1

Query: 205 HLLWKHVWANFCLSHHNDKLIDDNAVLQEFGLHNNSQVHFVPYVV 339
           H+ WKHVWANFCLS++NDKLI+D + LQ+FG+HNNSQVHFVP+++
Sbjct: 109 HISWKHVWANFCLSYYNDKLINDGSALQDFGIHNNSQVHFVPFIM 153



 Score = 30.4 bits (67), Expect(2) = 1e-17
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 12/35 (34%)
 Frame = +2

Query: 146 NVPKKPTLTEVDTFIN------------KMDGTSF 214
           +VPK+PTL++VDT IN            K+D TSF
Sbjct: 42  DVPKEPTLSDVDTLINLELGSAMRISVIKLDSTSF 76


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score = 84.0 bits (206), Expect(2) = 2e-16
 Identities = 31/45 (68%), Positives = 42/45 (93%)
 Frame = +1

Query: 205 HLLWKHVWANFCLSHHNDKLIDDNAVLQEFGLHNNSQVHFVPYVV 339
           H+ WKHVWANFCL+HHN+K++DD++VLQ+FG+ NNSQV F+PYV+
Sbjct: 114 HISWKHVWANFCLAHHNEKILDDSSVLQDFGIRNNSQVRFIPYVM 158



 Score = 26.2 bits (56), Expect(2) = 2e-16
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 12/34 (35%)
 Frame = +2

Query: 146 NVPKKPTLTEVDTFIN------------KMDGTS 211
           +VPK PTL+ VDT I+            K+DGT+
Sbjct: 47  DVPKNPTLSHVDTLISLELGSAMRISVLKLDGTA 80


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score = 80.5 bits (197), Expect(2) = 2e-15
 Identities = 31/45 (68%), Positives = 41/45 (91%)
 Frame = +1

Query: 205 HLLWKHVWANFCLSHHNDKLIDDNAVLQEFGLHNNSQVHFVPYVV 339
           H+ WKHVWANFCL+H N+KL+DD++VLQ+FG+ NNSQV F+PYV+
Sbjct: 114 HISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRNNSQVRFIPYVM 158



 Score = 26.2 bits (56), Expect(2) = 2e-15
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 12/34 (35%)
 Frame = +2

Query: 146 NVPKKPTLTEVDTFIN------------KMDGTS 211
           +VPK PTL+ VDT I+            K+DGT+
Sbjct: 47  DVPKNPTLSHVDTLISLELGSAMRISVLKLDGTA 80


>ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 209

 Score = 80.1 bits (196), Expect(2) = 3e-15
 Identities = 30/45 (66%), Positives = 41/45 (91%)
 Frame = +1

Query: 205 HLLWKHVWANFCLSHHNDKLIDDNAVLQEFGLHNNSQVHFVPYVV 339
           H+ WKHVWANFCL+H N+KL+DD++VLQ+FG+ NNSQ+ F+PYV+
Sbjct: 142 HISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRNNSQIRFIPYVM 186



 Score = 26.2 bits (56), Expect(2) = 3e-15
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 12/34 (35%)
 Frame = +2

Query: 146 NVPKKPTLTEVDTFIN------------KMDGTS 211
           +VPK PTL+ VDT I+            K+DGT+
Sbjct: 75  DVPKNPTLSHVDTLISLELGSAMRISVLKLDGTA 108


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 72.0 bits (175), Expect(2) = 1e-14
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +1

Query: 205 HLLWKHVWANFCLSHHNDKLIDDNAVLQEFGLHNNSQVHFVPYVV 339
           H+ WK VWANF LS+HN KL+DDN+ LQ+ G+ NNSQVHF  YV+
Sbjct: 106 HISWKKVWANFALSYHNQKLLDDNSALQDSGIRNNSQVHFASYVM 150



 Score = 32.3 bits (72), Expect(2) = 1e-14
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 12/35 (34%)
 Frame = +2

Query: 146 NVPKKPTLTEVDTFIN------------KMDGTSF 214
           +VPKKPTL++VDT I+            K+DGTSF
Sbjct: 39  DVPKKPTLSDVDTLISLEMGSAMRISVQKLDGTSF 73