BLASTX nr result
ID: Coptis21_contig00015012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00015012
(1667 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003609896.1| hypothetical protein MTR_4g124160 [Medicago ... 74 9e-11
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 72 6e-10
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc... 71 7e-10
ref|XP_002442911.1| hypothetical protein SORBIDRAFT_08g004760 [S... 71 7e-10
ref|XP_002312971.1| predicted protein [Populus trichocarpa] gi|2... 68 8e-09
>ref|XP_003609896.1| hypothetical protein MTR_4g124160 [Medicago truncatula]
gi|355510951|gb|AES92093.1| hypothetical protein
MTR_4g124160 [Medicago truncatula]
Length = 424
Score = 74.3 bits (181), Expect = 9e-11
Identities = 107/418 (25%), Positives = 162/418 (38%), Gaps = 63/418 (15%)
Frame = -1
Query: 1268 IHEDIFLEILVRLPLKSLHMCKSLSKKYYHLISSVSF-GRSYLNFRRRNVSSMMLGFLYQ 1092
+ +D+ +EI R+ K+ CKS+SK++ LIS + F RS L+ + M Q
Sbjct: 4 LSDDLLIEIWSRVSYKTAVSCKSISKRFLALISQLQFIERSILH--HHTLLQQMKEQENQ 61
Query: 1091 SKEPFMFNSMPIRFISDSPERKKS------GISVLPWDHDHRQHSVV--------RMVAS 954
K F F S IS SP S + L D + ++ R+V
Sbjct: 62 KKWHFNFISKRKLLISFSPNLNLSTPENQISLCFLGRKFDPKLDNITRKKHVLYSRIVGF 121
Query: 953 SNGFVLSRKEMMYAVESTREEYYNVCNPFTKQRVVLPKPP-----QAKFDCLVEAFICDG 789
SNG L +K +TR Y+VCN TK + LP PP K D ++E F+C+
Sbjct: 122 SNGLFLCKK-------TTRGRVYHVCNILTKDWIKLPLPPPPGTGHNKRDRVLEGFVCEP 174
Query: 788 N--------------------NYPCLDWTTFKVIRGLETKRPTSSTYYLDVQIFSSQTGE 669
+PC + T +++ G+ T S + ++ +FSS+TG+
Sbjct: 175 YYSIGESTKKVSFNHHRFRVVRFPCFEGTISEILWGI-----TKSEF--EMVVFSSETGQ 227
Query: 668 WIEFQLST---FSYSSTVYLSGDSVISERETVCLNATDEAGREXXXXXXXXXNTEHLRIV 498
W + +S S++ L V++ N G+ N E I+
Sbjct: 228 WSKKNVSCPNGLSFTRPAIL--PYVVAHE-----NILYFMGKTSILVYDPFNNDEKCEII 280
Query: 497 TRPRPESFE---YKG-VGACLGQSQGFIQYMIYNWCDNFEIWELNEDSSSETKWFLRYTV 330
P S + G VG C G+ F ++WEL +D S W L +
Sbjct: 281 NFPSDASANDILFNGHVGVCRGK---FRMACFCTLRCFVKVWELEQDYS----WSLLHVT 333
Query: 329 CTPQIFPGRSCDNFGFL----------------AFHPLNSAVVLLYHGEKIVLVDLKT 204
C P I P R C L A HP + VV L +I + +LKT
Sbjct: 334 CFPPI-PVRDCIVDELLMTGGRNEIVDMGTQVRAIHPYDGDVVFLQRAHRIFVGNLKT 390
>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 398
Score = 71.6 bits (174), Expect = 6e-10
Identities = 83/315 (26%), Positives = 129/315 (40%), Gaps = 6/315 (1%)
Frame = -1
Query: 1259 DIFLEILVRLPLKSLHMCKSLSKKYYHLISSVSFGRSYLNFRRRNVSSMMLGFLYQSKE- 1083
DI ++L RLP K+L + +SK ++ LI RS++ + + + GF++Q K
Sbjct: 6 DILFDVLSRLPTKTLLEMRFVSKAWHRLI----LDRSFVQAQFQKCGLALSGFMFQEKYR 61
Query: 1082 --PFMFNSMPIRFISDSPERKKSGISVLPWDHDHRQHSVVRMVASSNGFVLSRKEMMYAV 909
P ++ I + +K LP D V ++ S NG V R
Sbjct: 62 KCPIDISTFTYMPIDADSKVQKMVFGFLPED--------VVILQSCNGLVCCRSCFRTQH 113
Query: 908 ESTREEYYNVCNPFTKQRVVLPKPPQAKFDCLVEAFICDGNNYPCLDWTTFKVIRGLETK 729
+T VCNP K+ V F + AF D P T FKV+R + +
Sbjct: 114 STTHSTTIYVCNPLFKKWVSFEVAQLDSFSSIALAF--DPILDPVNTATNFKVVRIQQLE 171
Query: 728 RPTSSTYYLDVQIFSSQTGEWIEFQLSTFSYSSTVYLSGDSVISERETVCLNATDEAGRE 549
YY +I+SS+TG W E S YS L+ + ++ L TD+
Sbjct: 172 NEQEEMYY-TFEIYSSETGTWKE--SSEVCYSDGNLLNNNGTYAKGVLHWLTDTDQ---- 224
Query: 548 XXXXXXXXXNTEHLRIVTRPRP--ESFEYKGVGACLGQSQGFIQYMIYNWC-DNFEIWEL 378
E +V P P E F G C+G+S+G + +++ C D +W L
Sbjct: 225 ---ILAFDTEKELSLLVPSPIPALEMF-IDAPGTCIGESKGLLHFIMI--CEDGIIVWCL 278
Query: 377 NEDSSSETKWFLRYT 333
D E KW L+++
Sbjct: 279 --DDYFEAKWTLKHS 291
>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 399
Score = 71.2 bits (173), Expect = 7e-10
Identities = 83/315 (26%), Positives = 128/315 (40%), Gaps = 6/315 (1%)
Frame = -1
Query: 1259 DIFLEILVRLPLKSLHMCKSLSKKYYHLISSVSFGRSYLNFRRRNVSSMMLGFLYQSKE- 1083
DI ++L RLP K+L + +SK ++ LI RS++ + + + GF++Q K
Sbjct: 6 DILFDVLSRLPTKTLLEMRFVSKAWHRLI----LDRSFVQAQFQKCGLALSGFMFQEKYR 61
Query: 1082 --PFMFNSMPIRFISDSPERKKSGISVLPWDHDHRQHSVVRMVASSNGFVLSRKEMMYAV 909
P ++ I + +K LP D V ++ S NG V R
Sbjct: 62 KCPIDISTFTYMPIDADSKVQKMVFGFLPED--------VVILQSCNGLVCCRSCFRTQH 113
Query: 908 ESTREEYYNVCNPFTKQRVVLPKPPQAKFDCLVEAFICDGNNYPCLDWTTFKVIRGLETK 729
+T VCNP K+ V F + AF D P T FKV+R + +
Sbjct: 114 STTHSTTIYVCNPLFKKWVSFEVAQLDSFSSIALAF--DPILDPVNTATNFKVVRIQQLE 171
Query: 728 RPTSSTYYLDVQIFSSQTGEWIEFQLSTFSYSSTVYLSGDSVISERETVCLNATDEAGRE 549
YY +I+SS+TG W E S YS L + ++ L TD+
Sbjct: 172 NEQEEMYY-TFEIYSSETGTWKE--SSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQ---- 224
Query: 548 XXXXXXXXXNTEHLRIVTRPRP--ESFEYKGVGACLGQSQGFIQYMIYNWC-DNFEIWEL 378
E +V P P E F G C+G+S+G + +++ C D +W L
Sbjct: 225 ---ILAFDTEKELSLLVPSPIPALEMF-IDAPGTCIGESKGLLHFIMI--CEDGIIVWCL 278
Query: 377 NEDSSSETKWFLRYT 333
D E KW L+++
Sbjct: 279 --DDYFEAKWTLKHS 291
>ref|XP_002442911.1| hypothetical protein SORBIDRAFT_08g004760 [Sorghum bicolor]
gi|241943604|gb|EES16749.1| hypothetical protein
SORBIDRAFT_08g004760 [Sorghum bicolor]
Length = 384
Score = 71.2 bits (173), Expect = 7e-10
Identities = 87/371 (23%), Positives = 148/371 (39%), Gaps = 17/371 (4%)
Frame = -1
Query: 1271 FIHEDIFLEILVRLPLKSLHMCKSLSKKYYHLISSVSFGRSYLNFRRRNVSSMMLGFLYQ 1092
++ +D+ +EIL RLP K L K +S+ + LIS ++ + + + G Y
Sbjct: 7 YLPDDVVIEILARLPAKQLCRFKCVSRTWRRLISDLAHSDRF--------AQTLSGLFYY 58
Query: 1091 SKEPFMFNSMP--IRFISDSPERKKSGISVLPWDHDHRQHSVVRMVASSNGFVLSRKEMM 918
P P + P + +S LP + + ++ S NG +L R +
Sbjct: 59 RHRPHDGAHRPCFAGLRAPPPPGVDTALSFLP-----PSCAGMELLDSCNGLLLLRSSRV 113
Query: 917 YAVESTREEYYNVCNPFTKQRVVLPKPPQAKFD-CLVEAFICDGNNYPCLDWTTFKVIRG 741
S R +Y VCNP T V LP+P A + C +A + D N C+ F
Sbjct: 114 --PWSPRPRFYVVCNPATGDWVTLPQPSHAPGEMCYDDAMMADKNT--CVAALGFDPATS 169
Query: 740 LE-------TKRPTSSTYYLDVQIFSSQTGEWI----EFQLSTFSYSSTVYLSGDSVISE 594
L K + ++I+SS+TG+WI + S YL+G
Sbjct: 170 LHFHVFQLVEKEDQFVDVVVAMEIYSSETGKWILKESGWSKSILCNLQMTYLNGFLHFGI 229
Query: 593 RETVCLNATDEAGREXXXXXXXXXNTEHLRIVTRPRPESFEYKGVGACLGQSQGFIQYMI 414
+ + + D G+ T + V + R + + G +G SQG + Y+
Sbjct: 230 IDDDAVASVDTKGQ-----------TWRVTHVQQRRDDPDD--GGDGFVGHSQGRLLYVD 276
Query: 413 YNWCDNFEIWELNEDSSSETKWFLRYTVCTPQIFPGRSCDN---FGFLAFHPLNSAVVLL 243
N D+ + ED +W L+++V + R FG A HP + ++
Sbjct: 277 ANLNDDSISIYVLEDHDDRWEWTLKHSVSKLDLIQPRKSPRGVYFGVAAIHP-DDDLIYF 335
Query: 242 YHGEKIVLVDL 210
Y GE+++ D+
Sbjct: 336 YEGERLMSYDM 346
>ref|XP_002312971.1| predicted protein [Populus trichocarpa] gi|222849379|gb|EEE86926.1|
predicted protein [Populus trichocarpa]
Length = 437
Score = 67.8 bits (164), Expect = 8e-09
Identities = 98/404 (24%), Positives = 161/404 (39%), Gaps = 44/404 (10%)
Frame = -1
Query: 1262 EDIFLEILVRLPL-KSLHMCKSLSKKYYHLISSVSFGRSYLNFRRRNVSSMMLGFLYQSK 1086
+D+ LEIL+RLP KS C + K++ LI + SF + M + +
Sbjct: 35 DDLLLEILLRLPTAKSAIRCMLVCKRWCSLIPTRSFITRFKTHHTNEKKKKMCDYDAAYQ 94
Query: 1085 EPFMFNSMPIRFISDSPERKKSGISVL-PWDHDHRQHSVVRMVASSNGFVL---SRKEMM 918
P F FIS E + GI ++ P D + + FV S +++
Sbjct: 95 CPLSF------FISTEIEDPEDGIILMTPNDELEENLYTLEFLPKKEKFVAVKASCNDLL 148
Query: 917 YAVESTREEYYNV-----CNPFTKQRVVLPKPPQAKF-----DCLVEAFICDGNNYPCLD 768
+ + S +E Y V CNPFT++ ++LP PP+ + + +C+ N+ P D
Sbjct: 149 FCLAS--DENYTVTNQYICNPFTEKWLLLPPPPKRRSYTPRGESAFSGLVCEPNS-PRRD 205
Query: 767 WTTFKV---IRGLETKRPTSSTYYLDVQIFSSQTGEWIEFQLSTFSYSSTVYLSGDSVIS 597
+ R LE + Y+DV + S+TG+W EF LS Y S + + V
Sbjct: 206 VQGQEYEPRFRVLEFTPISELDAYMDV--YCSETGKWNEFILSGRQYDSFL----NVVAH 259
Query: 596 ERETVCLNATDEAGREXXXXXXXXXNTEHLRIVTRPRPESFEYKGVGACLGQSQGFIQYM 417
+ + N +D + +++R P + CLG QGF++ M
Sbjct: 260 DGKLHWYNGSDVVTYDPFDGGQTIFIDGSEIVLSRSDP----WINRSECLGVCQGFLRCM 315
Query: 416 IYNWC------DNFEIWELNEDSSSETKWFLRYTVCTPQIFPGRSCDNFGF--------- 282
+ DN +WEL + S R + T +I S DN F
Sbjct: 316 RLEYAAVGGDDDNLSVWELKDYES-------RRMILTRKI----SFDNMIFKDPDLCHVS 364
Query: 281 -----------LAFHPLNSAVVLLYHGEKIVLVDLKTKGRKVIS 183
AFHP N VV L+ +L ++++ ++I+
Sbjct: 365 MSSMSMFAPEAAAFHPNNKDVVCLFVFPHFILCNIQSGEFEIIN 408