BLASTX nr result

ID: Coptis21_contig00015002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015002
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277435.1| PREDICTED: vesicle-associated membrane prote...   205   2e-50
ref|XP_002516661.1| conserved hypothetical protein [Ricinus comm...   164   3e-38
ref|XP_002321995.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-35
ref|XP_004148677.1| PREDICTED: probable VAMP-like protein At1g33...   150   9e-34
ref|XP_002879072.1| hypothetical protein ARALYDRAFT_481613 [Arab...   136   1e-29

>ref|XP_002277435.1| PREDICTED: vesicle-associated membrane protein 727 [Vitis vinifera]
          Length = 273

 Score =  205 bits (521), Expect = 2e-50
 Identities = 117/272 (43%), Positives = 159/272 (58%), Gaps = 13/272 (4%)
 Frame = +3

Query: 240  MVSEPSLIHYTCISRGTTVLAEFNSGEQDLGALALQCLECTPHFHRTFSHTVGNRIYGFL 419
            M+S+P L+ Y CIS+GTT+LAEFNS + DL  LAL+CLE  P  H  FSHTV  R Y FL
Sbjct: 1    MISDPKLVFYACISKGTTILAEFNSVDPDLQTLALKCLEKAPALHSMFSHTVRQRTYTFL 60

Query: 420  MEE--PFVYFVILNEELGKHQGFQFLERVKDAFXXXXXXXXXXXXDNLKDHCFHEEFSPV 593
            ++E  P+VYF I +E++ +++   FL RVK+AF            D+L  HCF  EF+PV
Sbjct: 61   LDEPDPYVYFGIFDEKMERYETLWFLNRVKEAFKGMIRNDPIKNFDDLSSHCFQGEFNPV 120

Query: 594  YRRLLGSN-EFRSLKSPDTSVVSQNCGVDNSRIS------GKKAISIPLLGXXXXXXXXX 752
            +R+LL    E   L     S + QN   D   +S      GK+ +S+PLLG         
Sbjct: 121  FRQLLSHPVEPEQLNLDLNSSLPQNVLKDKRNLSLDCSTRGKRIVSLPLLG-KPGKGLKK 179

Query: 753  XXNTSDEMNDETRDVPMENK-VDVGEE-VTLTRDFSASLQKNGSYIGH--TGRHHAKKMW 920
                S E+N +TRD  MENK VDV ++  + TRDF AS+QKNG Y+G    GR  AK++W
Sbjct: 180  KKRLSGEVNGDTRDHLMENKVVDVSDDGGSQTRDFPASMQKNGGYLGDMAAGRQKAKQVW 239

Query: 921  RRHVWTXXXXXXXXXXXXFGVWLFVCKGFKCI 1016
            ++ VW             FGVWL++C+GF+C+
Sbjct: 240  KQQVWMVLILDLCVCSVLFGVWLWICRGFRCV 271


>ref|XP_002516661.1| conserved hypothetical protein [Ricinus communis]
            gi|223544156|gb|EEF45680.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 280

 Score =  164 bits (416), Expect = 3e-38
 Identities = 102/286 (35%), Positives = 140/286 (48%), Gaps = 27/286 (9%)
 Frame = +3

Query: 240  MVSEPSLIHYTCISRGTTVLAEFNSG-EQDLGALALQCLECTPHFHRTFSHTVGNRIYGF 416
            M+S P LI Y CIS+G T LAEF S  E  +  +A +C+E TP  H TFSHTV  + Y F
Sbjct: 1    MISNPDLIFYACISKGPTTLAEFTSSKEPGIEDIAKRCIERTPPLHSTFSHTVRRKTYTF 60

Query: 417  LMEEPFVYFVILNEELGKHQGFQFLERVKDAFXXXXXXXXXXXXDNLKDHCFHEEFSPVY 596
            L+ +P  YFVI +E L K + F FL RVK AF            D L  +CF E+F P++
Sbjct: 61   LINDPVAYFVISHESLEKSECFWFLNRVKIAFEEFSGANPVKDFDELTYNCFQEQFCPIF 120

Query: 597  RRLLGSNEFRSLKSPDTSVVSQNCGVDNSRISGKKAISIPLL------------------ 722
            R +L  N        +     +N  +D++R  GK+++  PLL                  
Sbjct: 121  RNILSLNVELVDSLMEVPKDIRNPSLDSTR--GKRSVVRPLLSKPAKLMMKKKKRQALGC 178

Query: 723  ------GXXXXXXXXXXXNTSDEMNDETRDVPMENKVDVGEEVTLTRDFSASLQKNGS-- 878
                  G           N ++  N+    V       VGE V + R+FS S+ KNG   
Sbjct: 179  AGCVSDGGGGGGEANVVDNNNNNNNNNNYKVN-----HVGENVVVNREFSVSMHKNGGGF 233

Query: 879  YIGHTGRHHAKKMWRRHVWTXXXXXXXXXXXXFGVWLFVCKGFKCI 1016
            Y+G  GR  AK++WR+HVW             FG+WL++C+GFKCI
Sbjct: 234  YMG-DGRQKAKQIWRKHVWVVLILDLVICAVLFGIWLWICRGFKCI 278


>ref|XP_002321995.1| predicted protein [Populus trichocarpa] gi|222868991|gb|EEF06122.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  154 bits (388), Expect = 6e-35
 Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 3/262 (1%)
 Frame = +3

Query: 240  MVSEPSLIHYTCISRGTTVLAEFNSG-EQDLGALALQCLECTPHFHRTFSHTVGNRIYGF 416
            M+S P+ + Y CI++G TVLAEF+S  E  +  +  +C+E TP  H  FSHT  N+ Y F
Sbjct: 1    MISNPNHVFYACIAKGPTVLAEFSSSKESGIEIIGQRCIEETPPNHSMFSHTTRNKTYTF 60

Query: 417  LMEEPFVYFVILNEELGKHQGFQFLERVKDAFXXXXXXXXXXXXDNLKDHCFHEEFSPVY 596
            L+++PF YF I +E L K +   FL RVKDAF            + +   CF  E   V+
Sbjct: 61   LIDDPFAYFAIFDENLQKSESLWFLNRVKDAFEEFLGAKMMKDGEKMGSFCFQGELRFVF 120

Query: 597  RRLLGSN-EFRSLKSPDTSVVSQNCGVDNSRISGKKAISIPLLGXXXXXXXXXXXNTSDE 773
            R++L  + +  +    +++  S+N  +D+++  G  A+  PLL             +  E
Sbjct: 121  RQILALDADLVNALMEESTKDSRNPSLDSTKAKG--AVIRPLLPKPSKVLMKKKKRSPGE 178

Query: 774  MNDETRDVPMENKVDVGEEVTLTRDFSAS-LQKNGSYIGHTGRHHAKKMWRRHVWTXXXX 950
             N +     ++N    G     +RDFS + +QK+G +    G+  AK++W++HVW     
Sbjct: 179  ANGDHHGGDLDNNKASGVGENGSRDFSVTMMQKSGGFYMGDGKQKAKQIWKKHVWVVLIL 238

Query: 951  XXXXXXXXFGVWLFVCKGFKCI 1016
                    FGVWL+VC+G KCI
Sbjct: 239  DLIVCAVLFGVWLWVCRGLKCI 260


>ref|XP_004148677.1| PREDICTED: probable VAMP-like protein At1g33475-like [Cucumis
            sativus] gi|449517529|ref|XP_004165798.1| PREDICTED:
            probable VAMP-like protein At1g33475-like [Cucumis
            sativus]
          Length = 255

 Score =  150 bits (378), Expect = 9e-34
 Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 2/263 (0%)
 Frame = +3

Query: 240  MVSEPSLIHYTCISRGTTVLAEFNSGEQDLGALALQCLECTPHFHRTFSHTVGNRIYGFL 419
            MVS P L+ Y+CI+RGT +LAEF   E +L  L  +C+E TP  H  FSHT+ NR Y FL
Sbjct: 1    MVSNPDLVLYSCIARGTIILAEFTR-EPNLDDLPFRCIEKTPPHHSIFSHTIRNRAYTFL 59

Query: 420  MEEPFVYFVILNEELGKHQGFQFLERVKDAFXXXXXXXXXXXXDNLKDHCFHEEFSPVYR 599
            +E  FVYF I +E+L K +   FL R+K  F            +N   HCF   F   +R
Sbjct: 60   IEGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSHCFQSHFDSSFR 119

Query: 600  RLLGSNEFRSLKSPDTSVVSQNCGVDNSRISGKKAISIPLLGXXXXXXXXXXXNTSDEMN 779
             LLG N  ++  S +    SQ   +D+S    +K I +                 + + N
Sbjct: 120  HLLGLNLNKT--SSNGLKGSQRSSLDSSL---RKQIPLVSKFSNPGSLMKKKKKVTGDGN 174

Query: 780  DETRDVPMENKVDVGEEVT--LTRDFSASLQKNGSYIGHTGRHHAKKMWRRHVWTXXXXX 953
             +     M++ VD+ ++     +RD +  +QK+GS+  ++ R  AK++WR+HVW      
Sbjct: 175  WDGGKYGMDDSVDLYDDNNGLCSRDITLLMQKHGSH--NSERQKAKQVWRKHVWVVLSID 232

Query: 954  XXXXXXXFGVWLFVCKGFKCIAS 1022
                   FG+WL+VC+GF+CI S
Sbjct: 233  LFVCLVLFGIWLWVCRGFQCIES 255


>ref|XP_002879072.1| hypothetical protein ARALYDRAFT_481613 [Arabidopsis lyrata subsp.
            lyrata] gi|297324911|gb|EFH55331.1| hypothetical protein
            ARALYDRAFT_481613 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  136 bits (343), Expect = 1e-29
 Identities = 89/273 (32%), Positives = 137/273 (50%), Gaps = 14/273 (5%)
 Frame = +3

Query: 240  MVSEPSLIHYTCISRGTTVLAEFNSGEQD-LGALALQCLECTPHFHRTFSHTVGNRIYGF 416
            M+S PSL+ YTCI++GT VLAEF S E+  + A+AL+C+E TP  H  FSHTV  + Y F
Sbjct: 1    MISNPSLLSYTCIAKGTVVLAEFVSKEEPGIEAVALRCIENTPPHHSMFSHTVHKKTYTF 60

Query: 417  LMEEP-FVYFVILNEELGKHQGFQFLERVKDAFXXXXXXXXXXXXD--NLKDHCFHEEFS 587
             +++  FVYF IL+E + K + F  L R++ A                N   HC   +  
Sbjct: 61   AIDDDSFVYFAILDESMEKPESFWVLNRLRSAIEDLIRDGGSDVETLINPVSHCLQSKLD 120

Query: 588  PVYRRLLGSNEFRSLKSPDTSVVSQNCGVDNSRISGKKAISIPLLGXXXXXXXXXXXNT- 764
            PV+  ++G  + RS +       S+N  +D+S+  G++A  +PLLG              
Sbjct: 121  PVFAEIVGVVDERSERE------SRNPSIDSSK--GRRAALMPLLGKPLKALKKKKKKRL 172

Query: 765  -SDEMNDETRDVPM-----ENKVDV---GEEVTLTRDFSASLQKNGSYIGHTGRHHAKKM 917
             ++    ++ +V       E  VDV   G    L ++      +NG    H  R  AK++
Sbjct: 173  HNEAKGQDSCEVGSIKEISEKNVDVCGNGNNGVLRKEL-----RNGLLSDHHHRQKAKQI 227

Query: 918  WRRHVWTXXXXXXXXXXXXFGVWLFVCKGFKCI 1016
            W++HVW             FG+WL++C+GF+CI
Sbjct: 228  WKKHVWVVLMFDFCICAVLFGIWLWICEGFQCI 260


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