BLASTX nr result
ID: Coptis21_contig00014898
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014898 (889 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|2... 291 1e-76 gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. glo... 291 1e-76 ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi... 288 9e-76 ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis... 285 1e-74 emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera] 283 4e-74 >ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa] Length = 495 Score = 291 bits (745), Expect = 1e-76 Identities = 140/185 (75%), Positives = 157/185 (84%) Frame = +3 Query: 3 IRNLVVQSMVSAXXXXXXXXXXXXXNVRVENVIAWNSRRGMRIKTAPGRGGYIRHITYEN 182 IRNLVV+SMVSA NV VENV+ W+SRR +RIKTAPGRGGY+RHITY N Sbjct: 311 IRNLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRN 370 Query: 183 VTFDNVRVGIVIKTDYNEHADDGYDRKAFPILGNISFIGIHGQGVRVPVRLHGSDDIPLR 362 +TFDNVRVGIVIKTDYNEH D+GYD KA PILG+ISF GIHGQGVRVPVR+HGS +IP+R Sbjct: 371 LTFDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVR 430 Query: 363 NLTFRDMSVGTTYKKKHIFQCAFVQGRVIGTIFPAPCDNLDLYNEQEQLVMRSSSQNITD 542 N+TF DMSVG TYKKKHIFQCAFVQGRVIGT+FPAPC+NLD Y+EQ +LV RS SQN+TD Sbjct: 431 NVTFWDMSVGLTYKKKHIFQCAFVQGRVIGTVFPAPCENLDRYDEQGKLVKRSVSQNLTD 490 Query: 543 IDYDF 557 IDYDF Sbjct: 491 IDYDF 495 >gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus] Length = 201 Score = 291 bits (745), Expect = 1e-76 Identities = 139/184 (75%), Positives = 159/184 (86%) Frame = +3 Query: 3 IRNLVVQSMVSAXXXXXXXXXXXXXNVRVENVIAWNSRRGMRIKTAPGRGGYIRHITYEN 182 IRNLVV+SMVSA NV VEN+ W+SRR +RIKTAPGRGGY++ ITY N Sbjct: 17 IRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIKTAPGRGGYVQDITYRN 76 Query: 183 VTFDNVRVGIVIKTDYNEHADDGYDRKAFPILGNISFIGIHGQGVRVPVRLHGSDDIPLR 362 +TF+NVRVGIVIKTDYNEH D+GYDRKAFPIL ISFIG+HGQGVRVPVR+HGS++IP+R Sbjct: 77 ITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQGVRVPVRIHGSEEIPVR 136 Query: 363 NLTFRDMSVGTTYKKKHIFQCAFVQGRVIGTIFPAPCDNLDLYNEQEQLVMRSSSQNITD 542 N+TF+DMSVG TYKKKHIFQCAFVQGRVIG+IFPAPC+NLDLY+EQE LV RS+SQNITD Sbjct: 137 NVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAPCENLDLYDEQENLVKRSASQNITD 196 Query: 543 IDYD 554 IDYD Sbjct: 197 IDYD 200 >ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis] gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis] Length = 494 Score = 288 bits (738), Expect = 9e-76 Identities = 136/185 (73%), Positives = 158/185 (85%) Frame = +3 Query: 3 IRNLVVQSMVSAXXXXXXXXXXXXXNVRVENVIAWNSRRGMRIKTAPGRGGYIRHITYEN 182 IRNLVV+SMVSA N+ VEN++ W+SRR +RIKTAPGRGGY+RHITY N Sbjct: 310 IRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRN 369 Query: 183 VTFDNVRVGIVIKTDYNEHADDGYDRKAFPILGNISFIGIHGQGVRVPVRLHGSDDIPLR 362 +TFDNVRVGIVIKTDYNEH D+GYD KA P+L +ISF G+HGQGVRVPVR+HGS++IP+R Sbjct: 370 LTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVR 429 Query: 363 NLTFRDMSVGTTYKKKHIFQCAFVQGRVIGTIFPAPCDNLDLYNEQEQLVMRSSSQNITD 542 N+TF+DMSVG TYKKKHIFQCAFVQGRVIGTIFPAPC+NLD Y+EQ +LV RS SQN+TD Sbjct: 430 NVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQGRLVKRSVSQNLTD 489 Query: 543 IDYDF 557 IDYDF Sbjct: 490 IDYDF 494 >ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera] gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera] Length = 493 Score = 285 bits (729), Expect = 1e-74 Identities = 131/185 (70%), Positives = 156/185 (84%) Frame = +3 Query: 3 IRNLVVQSMVSAXXXXXXXXXXXXXNVRVENVIAWNSRRGMRIKTAPGRGGYIRHITYEN 182 IRNLV++SMVSA NV VEN++ WNSRR +RIKT+PGRGGY++HI Y N Sbjct: 309 IRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRN 368 Query: 183 VTFDNVRVGIVIKTDYNEHADDGYDRKAFPILGNISFIGIHGQGVRVPVRLHGSDDIPLR 362 +TFDNVRVGIVIKTDYNEH DDG+D KA PIL +ISF G+HGQGVRVPVR+HGS++IP++ Sbjct: 369 LTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVK 428 Query: 363 NLTFRDMSVGTTYKKKHIFQCAFVQGRVIGTIFPAPCDNLDLYNEQEQLVMRSSSQNITD 542 +TFRDMSVG TYKKKHIFQCA+V+GRVIGT+FPAPC+NLD Y+EQEQL+ S SQN+TD Sbjct: 429 KVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLIKHSKSQNVTD 488 Query: 543 IDYDF 557 IDYDF Sbjct: 489 IDYDF 493 >emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera] Length = 509 Score = 283 bits (724), Expect = 4e-74 Identities = 131/185 (70%), Positives = 155/185 (83%) Frame = +3 Query: 3 IRNLVVQSMVSAXXXXXXXXXXXXXNVRVENVIAWNSRRGMRIKTAPGRGGYIRHITYEN 182 IRNLV++SMVSA NV VEN++ WNSRR +RIKT+PGRGGY++HI Y N Sbjct: 325 IRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRN 384 Query: 183 VTFDNVRVGIVIKTDYNEHADDGYDRKAFPILGNISFIGIHGQGVRVPVRLHGSDDIPLR 362 +TFDNVRVGIVIKTDYNEH DDG+D KA PIL +ISF G+HGQGVRVPVR+HGS++IP++ Sbjct: 385 LTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVK 444 Query: 363 NLTFRDMSVGTTYKKKHIFQCAFVQGRVIGTIFPAPCDNLDLYNEQEQLVMRSSSQNITD 542 +TFRDMSVG TYKKKHIFQCA+V+GRVIGT+FPAPC+NLD Y+EQEQL S SQN+TD Sbjct: 445 KVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLXKHSXSQNVTD 504 Query: 543 IDYDF 557 IDYDF Sbjct: 505 IDYDF 509