BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014887
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   102   3e-20
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    72   4e-11

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  102 bits (254), Expect = 3e-20
 Identities = 65/124 (52%), Positives = 67/124 (54%)
 Frame = -3

Query: 372  WLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWXXXXXXXXXXXXXXXXXXXX 193
            WLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIW                    
Sbjct: 1001 WLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIW-----------------PEL 1043

Query: 192  XXXXXSFLQDLARTVRQIPTRYAPVRHFVLNCSHLLGETSYL*LGASFPSAQLP*NNVRL 13
                       A     +PT +A    F               LGASFPSAQLP NNVRL
Sbjct: 1044 FGRFPRITHPFATLFSTVPTSWARQATFT--------------LGASFPSAQLPENNVRL 1089

Query: 12   ACVK 1
            ACVK
Sbjct: 1090 ACVK 1093


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/49 (75%), Positives = 38/49 (77%)
 Frame = +1

Query: 31  GELGRRKRGS*LKVACLAQEVGTV*NKVANGCVTRGNLPNSSGQILKKA 177
           G     K    +KVACLAQEVGTV NKVANGCV RGNLPNSSGQILKKA
Sbjct: 106 GSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKA 154



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 46/124 (37%), Positives = 48/124 (38%)
 Frame = +2

Query: 2   LTHASRTLF*GSWAEGKEAPS*R*LVSPRRWEQFRTKWRTGA*RVGICRTVRAKS*RKLX 181
           LTHASRTLF GSWAEGKEAPS +     +       K   G    G              
Sbjct: 96  LTHASRTLFSGSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRG-------------- 141

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXQILKKAKKRCXXXXXXXXXXXXXXXTKPMMLSWSFR 361
                                   QILKKAKK                 TKPMMLSWSFR
Sbjct: 142 -----------------NLPNSSGQILKKAKK----------------LTKPMMLSWSFR 168

Query: 362 MISH 373
           MISH
Sbjct: 169 MISH 172