BLASTX nr result

ID: Coptis21_contig00014787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014787
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis...   341   1e-91
ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|2...   326   6e-87
ref|XP_002532489.1| protein with unknown function [Ricinus commu...   305   8e-81
ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [...   299   6e-79
ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [...   298   1e-78

>ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
           gi|297734313|emb|CBI15560.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  341 bits (875), Expect = 1e-91
 Identities = 168/215 (78%), Positives = 188/215 (87%)
 Frame = -3

Query: 760 DSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNVKVGDKLIK 581
           DSFD+ECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRN+KVGDKLIK
Sbjct: 4   DSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIK 63

Query: 580 AQIWDTAGQERFRAITSSYYRGALGAMLVYDLTRRATFDNLKKWLEELRHFGDSDMVIVL 401
           AQIWDTAGQERFRAITSSYYRGALGA+LVYD+TRRATF+NLKKWL ELR FG  DMVIVL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVL 123

Query: 400 VGNKSDLVHKREVSEEDGRSLAENENIFFIETSALENFNVEEAFLHMISHIHKITSQKNL 221
           VGNKSDL H REV EE+G++LAE E + F+ETSALEN NVEEAFLHMI+ IH++TSQKNL
Sbjct: 124 VGNKSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNL 183

Query: 220 EAKVIEGMTPNVGNTTILHIDEVSATTKDTGCCLR 116
           EAK+ E + P +    I+H+D   + TK + CC R
Sbjct: 184 EAKLNEPVKPLIIGKEIIHVDHEVSATKQSSCCSR 218


>ref|XP_002322095.1| predicted protein [Populus trichocarpa] gi|222869091|gb|EEF06222.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  326 bits (835), Expect = 6e-87
 Identities = 166/220 (75%), Positives = 186/220 (84%), Gaps = 5/220 (2%)
 Frame = -3

Query: 766 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNVKVGDKL 587
           M DS+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRN++VGDKL
Sbjct: 1   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKL 60

Query: 586 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDLTRRATFDNLKKWLEELRHFGDSDMVI 407
           IKAQIWDTAGQERFRAITSSYYRGALGA+LVYD+TRRATFDN+KKWL ELR FG SDMV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVV 120

Query: 406 VLVGNKSDLVHKREVSEEDGRSLAENENIFFIETSALENFNVEEAFLHMISHIHKITSQK 227
           VLVGNKSD+ H REV E+DG++LAE E ++F+ETSALEN NVEEAF+ MI+ IH+I SQK
Sbjct: 121 VLVGNKSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQK 180

Query: 226 NLEAKVIEGMTPN-----VGNTTILHIDEVSATTKDTGCC 122
           +LEAK  E          VG   I   DEVSAT + + CC
Sbjct: 181 SLEAKKNETTISTIKALPVGKEVINIDDEVSATKQASYCC 220


>ref|XP_002532489.1| protein with unknown function [Ricinus communis]
           gi|223527788|gb|EEF29888.1| protein with unknown
           function [Ricinus communis]
          Length = 222

 Score =  305 bits (782), Expect = 8e-81
 Identities = 149/186 (80%), Positives = 168/186 (90%)
 Frame = -3

Query: 766 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNVKVGDKL 587
           M DS+DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRN++V DKL
Sbjct: 1   MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKL 60

Query: 586 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDLTRRATFDNLKKWLEELRHFGDSDMVI 407
           IKAQIWDTAGQERFRAITSSYYRGALGA+LVYD+TRRATFDN+KKWL ELR +G+ +MV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVV 120

Query: 406 VLVGNKSDLVHKREVSEEDGRSLAENENIFFIETSALENFNVEEAFLHMISHIHKITSQK 227
           VL GNK DL H REV EE+G++LAE E + F+ETSALEN NVEEAFL MI+ IH ITSQK
Sbjct: 121 VLAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK 180

Query: 226 NLEAKV 209
           +LE ++
Sbjct: 181 SLEVRL 186


>ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
          Length = 217

 Score =  299 bits (766), Expect = 6e-79
 Identities = 151/218 (69%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
 Frame = -3

Query: 766 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNVKVGDKL 587
           M D+FDEECDYLFKAVLIGDS VGKSN+LSRF++DEFRLDSKPTIGVEFAYRN++VGDKL
Sbjct: 1   MADAFDEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKL 60

Query: 586 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDLTRRATFDNLKKWLEELRHFGDSDMVI 407
           IKAQIWDTAGQERFRAITSSYYRGALGAMLVYD++ R++++N+ KWL ELR FG  DMV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVV 120

Query: 406 VLVGNKSDLVHKREVSEEDGRSLAENENIFFIETSALENFNVEEAFLHMISHIHKITSQK 227
           VLVGNK DL   REV +E+G+  AE E + F+ETSAL+N NVEE FL MI+ I+ +TSQK
Sbjct: 121 VLVGNKCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQK 180

Query: 226 NLEAKVIEGMTPNVGNTTILHI-DEVSATTKDTGCCLR 116
           NL AK +E    N+ N   +HI DEV+AT + + CC R
Sbjct: 181 NLAAK-MEEQPINLLNGKEIHIADEVTATKQTSTCCSR 217


>ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
          Length = 218

 Score =  298 bits (764), Expect = 1e-78
 Identities = 154/219 (70%), Positives = 181/219 (82%), Gaps = 2/219 (0%)
 Frame = -3

Query: 766 MDDSFDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNVKVGDKL 587
           M D+FDEECDYLFKAVLIGDS VGKSNLLSRF++DEFRLDSKPTIGVEFAYRN+KVGDKL
Sbjct: 1   MADAFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKL 60

Query: 586 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDLTRRATFDNLKKWLEELRHFGDSDMVI 407
           IKAQIWDTAGQERFRAITSSYYRGALGAMLVYD++RR++++N+ KWL ELR FG  DMV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVV 120

Query: 406 VLVGNKSDL-VHKREVSEEDGRSLAENENIFFIETSALENFNVEEAFLHMISHIHKITSQ 230
           VLVGNK DL    REV +E+G+  AE E + F+ETSAL+N NVEE FL MI+ I+ +TSQ
Sbjct: 121 VLVGNKCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQ 180

Query: 229 KNLEAKVIEGMTPNVGNTTILHI-DEVSATTKDTGCCLR 116
           KNL AK+ E    N+ N   +HI DEV+AT + + CC R
Sbjct: 181 KNLAAKMDE-KPINLLNGKEIHIADEVTATKQSSTCCSR 218


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