BLASTX nr result

ID: Coptis21_contig00014581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014581
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002300924.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6...   135   3e-30
ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6...   135   5e-30
ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6...   134   6e-30

>ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|222856942|gb|EEE94489.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/69 (85%), Positives = 63/69 (91%)
 Frame = +2

Query: 92  MADEEPVDQKKYFEDSCKPKCVKSLLEYQECVKRIDGDESGHKHCTGQYFDYWFCVDKCV 271
           MADEEPVD KKY E++CKPKCV+ LLEYQ CVKRI GDESGHKHCTGQYFDYW CVDKCV
Sbjct: 1   MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 272 APKLFTQLK 298
           APKLFT+LK
Sbjct: 61  APKLFTKLK 69


>ref|XP_002300924.1| predicted protein [Populus trichocarpa] gi|222842650|gb|EEE80197.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score =  136 bits (342), Expect = 2e-30
 Identities = 57/68 (83%), Positives = 64/68 (94%)
 Frame = +2

Query: 95  ADEEPVDQKKYFEDSCKPKCVKSLLEYQECVKRIDGDESGHKHCTGQYFDYWFCVDKCVA 274
           ADEE VDQKKY EDSCKPKCVK LLEY+ CVKR++GDESGHKHCTGQYFDYW+C+DKCVA
Sbjct: 17  ADEELVDQKKYLEDSCKPKCVKPLLEYEACVKRVEGDESGHKHCTGQYFDYWYCIDKCVA 76

Query: 275 PKLFTQLK 298
           PKLF++LK
Sbjct: 77  PKLFSKLK 84


>ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
           gi|255628593|gb|ACU14641.1| unknown [Glycine max]
          Length = 69

 Score =  135 bits (341), Expect = 3e-30
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = +2

Query: 92  MADEEPVDQKKYFEDSCKPKCVKSLLEYQECVKRIDGDESGHKHCTGQYFDYWFCVDKCV 271
           MADEEPVDQK+Y E+SCKPKCVK LLEYQ C+KRI GDESG KHCTGQYFDYW C+DKCV
Sbjct: 1   MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCV 60

Query: 272 APKLFTQLK 298
           APKLFT+LK
Sbjct: 61  APKLFTKLK 69


>ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6-like [Cucumis sativus]
           gi|449528698|ref|XP_004171340.1| PREDICTED: cytochrome
           b-c1 complex subunit 6-like [Cucumis sativus]
          Length = 69

 Score =  135 bits (339), Expect = 5e-30
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = +2

Query: 92  MADEEPVDQKKYFEDSCKPKCVKSLLEYQECVKRIDGDESGHKHCTGQYFDYWFCVDKCV 271
           MADEEPVDQK+Y E++CKPKCVK LLEYQ CVKRI GD+SGHKHCTGQYFDYW C+DKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 272 APKLFTQLK 298
           APKL T+LK
Sbjct: 61  APKLLTKLK 69


>ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
           gi|255630456|gb|ACU15586.1| unknown [Glycine max]
          Length = 69

 Score =  134 bits (338), Expect = 6e-30
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = +2

Query: 92  MADEEPVDQKKYFEDSCKPKCVKSLLEYQECVKRIDGDESGHKHCTGQYFDYWFCVDKCV 271
           MADEEPVDQK+Y E+SCKPKCVK LLEYQ C+KRI GD+SG KHCTGQYFDYW C+DKCV
Sbjct: 1   MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCV 60

Query: 272 APKLFTQLK 298
           APKLFT+LK
Sbjct: 61  APKLFTKLK 69


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