BLASTX nr result
ID: Coptis21_contig00014571
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014571 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331063.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 ref|XP_002325188.1| predicted protein [Populus trichocarpa] gi|2... 74 9e-12 gb|ABI34394.1| Mutator transposable element-related protein, put... 68 9e-10 ref|XP_002263415.1| PREDICTED: uncharacterized protein LOC100254... 65 4e-09 emb|CAN71232.1| hypothetical protein VITISV_009875 [Vitis vinifera] 65 4e-09 >ref|XP_002331063.1| predicted protein [Populus trichocarpa] gi|222872993|gb|EEF10124.1| predicted protein [Populus trichocarpa] Length = 1018 Score = 76.3 bits (186), Expect = 2e-12 Identities = 41/91 (45%), Positives = 47/91 (51%) Frame = +2 Query: 2 PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181 P E L A+ LKV+ S++ F VH D IH VD R CTC W + PC HAI Sbjct: 770 PSKEKKLQEDALRAQFLKVLFSSDTLFEVHDDSIHVVDTEKRDCTCLEWKLTGLPCCHAI 829 Query: 182 ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274 A KG S Y Y + YTV FR YS SI Sbjct: 830 AVFKCKGSSIYDYCSKYYTVDSFRMTYSKSI 860 >ref|XP_002325188.1| predicted protein [Populus trichocarpa] gi|222866622|gb|EEF03753.1| predicted protein [Populus trichocarpa] Length = 1041 Score = 74.3 bits (181), Expect = 9e-12 Identities = 41/91 (45%), Positives = 46/91 (50%) Frame = +2 Query: 2 PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181 P E L A+ LKV+ S + F VH D IH VD R CTC W + PC HAI Sbjct: 768 PSKEKKLQEDAFRAQFLKVLFSTDTLFEVHDDSIHVVDTEKRECTCLEWKLAGLPCRHAI 827 Query: 182 ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274 A KG S Y Y + YTV FR YS SI Sbjct: 828 AVFKCKGSSVYDYCSKYYTVDSFRSTYSKSI 858 >gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum tuberosum] Length = 616 Score = 67.8 bits (164), Expect = 9e-10 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%) Frame = +2 Query: 2 PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIH---SVDLMNRTCTCNYWCIDNFPCI 172 PK++ +L AA +SN+ ++ + IH +VDL NR C+C W I PC Sbjct: 182 PKIKDILHKNQTAAGEYIPRKSNQRKYEIIGATIHDSWAVDLENRICSCTKWSIMGIPCK 241 Query: 173 HAIACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274 HAIA I +K D+ Y+D+ Y V +R+ Y H+I Sbjct: 242 HAIAAIRAKKDNILDYVDDCYKVETYRRIYEHAI 275 >ref|XP_002263415.1| PREDICTED: uncharacterized protein LOC100254040 [Vitis vinifera] Length = 922 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/91 (38%), Positives = 47/91 (51%) Frame = +2 Query: 2 PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181 P E L ++ AR+LKV+ S + F VH D I+ V++ + C+C W PC HAI Sbjct: 764 PSKEEKLQDEIIKARSLKVLFSTDTLFEVHDDSINVVNIDSWDCSCLQWKATGLPCCHAI 823 Query: 182 ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274 A G S Y Y +T+ FR YS SI Sbjct: 824 AVFNCTGRSVYDYCSRYFTLNSFRLTYSESI 854 >emb|CAN71232.1| hypothetical protein VITISV_009875 [Vitis vinifera] Length = 856 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/91 (38%), Positives = 47/91 (51%) Frame = +2 Query: 2 PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181 P E L ++ AR+LKV+ S + F VH D I+ V++ + C+C W PC HAI Sbjct: 698 PSKEEKLQDEIIXARSLKVLFSTDTLFEVHDDSINVVNIDSWDCSCLQWKATGLPCCHAI 757 Query: 182 ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274 A G S Y Y +T+ FR YS SI Sbjct: 758 AVFNCTGRSVYDYCSRYFTLNSFRLTYSESI 788