BLASTX nr result

ID: Coptis21_contig00014571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014571
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331063.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002325188.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
gb|ABI34394.1| Mutator transposable element-related protein, put...    68   9e-10
ref|XP_002263415.1| PREDICTED: uncharacterized protein LOC100254...    65   4e-09
emb|CAN71232.1| hypothetical protein VITISV_009875 [Vitis vinifera]    65   4e-09

>ref|XP_002331063.1| predicted protein [Populus trichocarpa] gi|222872993|gb|EEF10124.1|
            predicted protein [Populus trichocarpa]
          Length = 1018

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/91 (45%), Positives = 47/91 (51%)
 Frame = +2

Query: 2    PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181
            P  E  L      A+ LKV+ S++  F VH D IH VD   R CTC  W +   PC HAI
Sbjct: 770  PSKEKKLQEDALRAQFLKVLFSSDTLFEVHDDSIHVVDTEKRDCTCLEWKLTGLPCCHAI 829

Query: 182  ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274
            A    KG S Y Y  + YTV  FR  YS SI
Sbjct: 830  AVFKCKGSSIYDYCSKYYTVDSFRMTYSKSI 860


>ref|XP_002325188.1| predicted protein [Populus trichocarpa] gi|222866622|gb|EEF03753.1|
            predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/91 (45%), Positives = 46/91 (50%)
 Frame = +2

Query: 2    PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181
            P  E  L      A+ LKV+ S +  F VH D IH VD   R CTC  W +   PC HAI
Sbjct: 768  PSKEKKLQEDAFRAQFLKVLFSTDTLFEVHDDSIHVVDTEKRECTCLEWKLAGLPCRHAI 827

Query: 182  ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274
            A    KG S Y Y  + YTV  FR  YS SI
Sbjct: 828  AVFKCKGSSVYDYCSKYYTVDSFRSTYSKSI 858


>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
           tuberosum]
          Length = 616

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = +2

Query: 2   PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIH---SVDLMNRTCTCNYWCIDNFPCI 172
           PK++ +L     AA      +SN+ ++ +    IH   +VDL NR C+C  W I   PC 
Sbjct: 182 PKIKDILHKNQTAAGEYIPRKSNQRKYEIIGATIHDSWAVDLENRICSCTKWSIMGIPCK 241

Query: 173 HAIACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274
           HAIA I +K D+   Y+D+ Y V  +R+ Y H+I
Sbjct: 242 HAIAAIRAKKDNILDYVDDCYKVETYRRIYEHAI 275


>ref|XP_002263415.1| PREDICTED: uncharacterized protein LOC100254040 [Vitis vinifera]
          Length = 922

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/91 (38%), Positives = 47/91 (51%)
 Frame = +2

Query: 2    PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181
            P  E  L  ++  AR+LKV+ S +  F VH D I+ V++ +  C+C  W     PC HAI
Sbjct: 764  PSKEEKLQDEIIKARSLKVLFSTDTLFEVHDDSINVVNIDSWDCSCLQWKATGLPCCHAI 823

Query: 182  ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274
            A     G S Y Y    +T+  FR  YS SI
Sbjct: 824  AVFNCTGRSVYDYCSRYFTLNSFRLTYSESI 854


>emb|CAN71232.1| hypothetical protein VITISV_009875 [Vitis vinifera]
          Length = 856

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/91 (38%), Positives = 47/91 (51%)
 Frame = +2

Query: 2   PKMEIVLASKVEAARTLKVVRSNENQFLVHSDVIHSVDLMNRTCTCNYWCIDNFPCIHAI 181
           P  E  L  ++  AR+LKV+ S +  F VH D I+ V++ +  C+C  W     PC HAI
Sbjct: 698 PSKEEKLQDEIIXARSLKVLFSTDTLFEVHDDSINVVNIDSWDCSCLQWKATGLPCCHAI 757

Query: 182 ACIGSKGDSFYGYIDEGYTVIMFRQCYSHSI 274
           A     G S Y Y    +T+  FR  YS SI
Sbjct: 758 AVFNCTGRSVYDYCSRYFTLNSFRLTYSESI 788


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