BLASTX nr result

ID: Coptis21_contig00014556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014556
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinif...    87   1e-15
ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002524004.1| signal transducer, putative [Ricinus communi...    80   2e-13
ref|NP_566209.1| uncharacterized protein [Arabidopsis thaliana] ...    77   1e-12
gb|AAF01600.1|AC009895_21 unknown protein [Arabidopsis thaliana]...    77   1e-12

>ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinifera]
          Length = 638

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/78 (55%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   DMLDPVWEQILCDPXXXXXXXXXXXXXAVVALYAPTFEKKEFLPKCLPDLPDSVLPATAA 180
           D LDP W QIL DP             AV+ LYAPTF KKEFLP+CLP LP +V P T A
Sbjct: 539 DTLDPAWAQILSDPFLRRILLRFIFCRAVLTLYAPTFNKKEFLPECLPCLPMAVHPTTTA 598

Query: 181 SQSIVLQMANIFGVTDHF 234
           SQ++VLQ+A+IF  T+ F
Sbjct: 599 SQTMVLQIASIFSATNRF 616


>ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|222858136|gb|EEE95683.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/78 (52%), Positives = 50/78 (64%)
 Frame = +1

Query: 1   DMLDPVWEQILCDPXXXXXXXXXXXXXAVVALYAPTFEKKEFLPKCLPDLPDSVLPATAA 180
           DMLDPVW QIL DP             AV+ L+AP+  KKEF P+C+P LP S+ P  +A
Sbjct: 496 DMLDPVWAQILGDPFLRRLLLRFLFCRAVLTLFAPSSGKKEFHPECMPSLPTSLQPNASA 555

Query: 181 SQSIVLQMANIFGVTDHF 234
            Q++VLQMANIFG T  F
Sbjct: 556 CQTVVLQMANIFGATKKF 573


>ref|XP_002524004.1| signal transducer, putative [Ricinus communis]
           gi|223536731|gb|EEF38372.1| signal transducer, putative
           [Ricinus communis]
          Length = 761

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/78 (50%), Positives = 47/78 (60%)
 Frame = +1

Query: 1   DMLDPVWEQILCDPXXXXXXXXXXXXXAVVALYAPTFEKKEFLPKCLPDLPDSVLPATAA 180
           D LDPVW QIL DP             AV+ L+ P+F KKE  P C+P LP S+ P   A
Sbjct: 526 DTLDPVWAQILGDPFLRRLLVRFLFCRAVLTLFGPSFGKKECHPDCIPSLPASLQPTATA 585

Query: 181 SQSIVLQMANIFGVTDHF 234
           SQ+++LQMANIFG T  F
Sbjct: 586 SQTVILQMANIFGATKKF 603


>ref|NP_566209.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332640437|gb|AEE73958.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 607

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 44/78 (56%)
 Frame = +1

Query: 1   DMLDPVWEQILCDPXXXXXXXXXXXXXAVVALYAPTFEKKEFLPKCLPDLPDSVLPATAA 180
           D L PVW QIL DP             AV+ALY P F  K+  P+C P LP+S+LP   A
Sbjct: 518 DTLHPVWSQILKDPFLRRLLLRFIFCRAVLALYTPVFNNKQNQPECCPSLPESLLPTAPA 577

Query: 181 SQSIVLQMANIFGVTDHF 234
            QS V QMAN+FG T  F
Sbjct: 578 VQSAVFQMANVFGATSKF 595


>gb|AAF01600.1|AC009895_21 unknown protein [Arabidopsis thaliana]
           gi|6091765|gb|AAF03475.1|AC009327_14 unknown protein
           [Arabidopsis thaliana]
          Length = 581

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 44/78 (56%)
 Frame = +1

Query: 1   DMLDPVWEQILCDPXXXXXXXXXXXXXAVVALYAPTFEKKEFLPKCLPDLPDSVLPATAA 180
           D L PVW QIL DP             AV+ALY P F  K+  P+C P LP+S+LP   A
Sbjct: 492 DTLHPVWSQILKDPFLRRLLLRFIFCRAVLALYTPVFNNKQNQPECCPSLPESLLPTAPA 551

Query: 181 SQSIVLQMANIFGVTDHF 234
            QS V QMAN+FG T  F
Sbjct: 552 VQSAVFQMANVFGATSKF 569


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