BLASTX nr result

ID: Coptis21_contig00014555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014555
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinif...   130   1e-28
ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002524004.1| signal transducer, putative [Ricinus communi...   116   2e-24
emb|CBI38092.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|NP_001145368.1| uncharacterized protein LOC100278709 [Zea ma...   111   5e-23

>ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinifera]
          Length = 638

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/100 (67%), Positives = 79/100 (79%)
 Frame = +3

Query: 3   LFLIVDSDCSEAFKTIHGSEQGEPTVILLXXXXXXXGVGASVDSARHPSGSQFTMFLTAP 182
           LFL++DSD SEAF    GSE+GEP  +LL        V A+VD++RHP+GS FT+FLTAP
Sbjct: 439 LFLVIDSDSSEAFSANFGSEKGEPAALLLSPSSLSPPV-AAVDTSRHPTGSLFTIFLTAP 497

Query: 183 LQAFCLLLGFSGSSFDMDVYNKAEKLLSSLLNVWGLTLAT 302
           LQAFCLLLGFSGS  +MD+Y+KAEKLLSS LN WGLTLAT
Sbjct: 498 LQAFCLLLGFSGSDVEMDLYSKAEKLLSSSLNDWGLTLAT 537


>ref|XP_002319760.1| predicted protein [Populus trichocarpa] gi|222858136|gb|EEE95683.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/102 (61%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   LFLIVDSDCSEAFKT--IHGSEQGEPTVILLXXXXXXXGVGASVDSARHPSGSQFTMFLT 176
           LF+++DSD SEAFK   I G+E+GEP  I+L          A  DS+RH SGS  TMFLT
Sbjct: 395 LFIVIDSDSSEAFKANAISGAEKGEPAAIILSPSCSIPLTTA--DSSRHHSGSLLTMFLT 452

Query: 177 APLQAFCLLLGFSGSSFDMDVYNKAEKLLSSLLNVWGLTLAT 302
            PLQAFCLL+G SG   +MD YNKAEKLLSS LN WGLTLAT
Sbjct: 453 TPLQAFCLLIGLSGPDVEMDTYNKAEKLLSSSLNAWGLTLAT 494


>ref|XP_002524004.1| signal transducer, putative [Ricinus communis]
           gi|223536731|gb|EEF38372.1| signal transducer, putative
           [Ricinus communis]
          Length = 761

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/100 (61%), Positives = 71/100 (71%)
 Frame = +3

Query: 3   LFLIVDSDCSEAFKTIHGSEQGEPTVILLXXXXXXXGVGASVDSARHPSGSQFTMFLTAP 182
           LF+++DSD SEAFK   GSE+GEP  ILL           +V+S+RH SGS FT+FLT P
Sbjct: 427 LFIVIDSDVSEAFKASVGSEKGEPAAILLSPSCSTPLT--AVESSRHQSGSLFTLFLTTP 484

Query: 183 LQAFCLLLGFSGSSFDMDVYNKAEKLLSSLLNVWGLTLAT 302
           LQAFCLL+G SGS  +MD YNKAE LLSS LN WG  LAT
Sbjct: 485 LQAFCLLIGLSGSDIEMDTYNKAEALLSSSLNDWGSALAT 524


>emb|CBI38092.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/109 (55%), Positives = 76/109 (69%), Gaps = 9/109 (8%)
 Frame = +3

Query: 3   LFLIVDSDCSEAFKT---------IHGSEQGEPTVILLXXXXXXXGVGASVDSARHPSGS 155
           LFL++D      +           I+G+E+GEP  +LL        V A+VD++RHP+GS
Sbjct: 439 LFLVIDKAFKHVYVILIGRYCLHGINGAEKGEPAALLLSPSSLSPPV-AAVDTSRHPTGS 497

Query: 156 QFTMFLTAPLQAFCLLLGFSGSSFDMDVYNKAEKLLSSLLNVWGLTLAT 302
            FT+FLTAPLQAFCLLLGFSGS  +MD+Y+KAEKLLSS LN WGLTLAT
Sbjct: 498 LFTIFLTAPLQAFCLLLGFSGSDVEMDLYSKAEKLLSSSLNDWGLTLAT 546


>ref|NP_001145368.1| uncharacterized protein LOC100278709 [Zea mays]
           gi|195655187|gb|ACG47061.1| hypothetical protein [Zea
           mays] gi|223947217|gb|ACN27692.1| unknown [Zea mays]
           gi|414886660|tpg|DAA62674.1| TPA: hypothetical protein
           ZEAMMB73_207332 [Zea mays]
          Length = 626

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/98 (59%), Positives = 69/98 (70%)
 Frame = +3

Query: 3   LFLIVDSDCSEAFKTIHGSEQGEPTVILLXXXXXXXGVGASVDSARHPSGSQFTMFLTAP 182
           LFL++DS  S AFK+IHG+E+GE + +LL         G S DS RH SGSQFTMFLT+P
Sbjct: 404 LFLVIDSSTSYAFKSIHGTERGETSAMLLSPSSRSSAAGFSGDSTRH-SGSQFTMFLTSP 462

Query: 183 LQAFCLLLGFSGSSFDMDVYNKAEKLLSSLLNVWGLTL 296
           LQAFCLLLG +G+  D D YNKAE+LL   LN W  TL
Sbjct: 463 LQAFCLLLGNNGTDIDRDAYNKAEELLLLSLNEWAATL 500


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