BLASTX nr result

ID: Coptis21_contig00014512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014512
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526765.1| Makorin-1, putative [Ricinus communis] gi|22...   140   1e-31
ref|XP_002314030.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makor...   138   5e-31
ref|XP_003546878.1| PREDICTED: E3 ubiquitin-protein ligase makor...   133   2e-29
ref|XP_003599126.1| E3 ubiquitin-protein ligase makorin [Medicag...   129   3e-28

>ref|XP_002526765.1| Makorin-1, putative [Ricinus communis] gi|223533892|gb|EEF35619.1|
           Makorin-1, putative [Ricinus communis]
          Length = 361

 Score =  140 bits (353), Expect = 1e-31
 Identities = 76/123 (61%), Positives = 84/123 (68%), Gaps = 9/123 (7%)
 Frame = -2

Query: 343 MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVK---IA 173
           MSKRVLCKFFAHGACLKG+HCEFSHDWKD  NN+CT+YQKG+CSYGSRCRYEHVK     
Sbjct: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGICSYGSRCRYEHVKPLRSD 60

Query: 172 TISSSSTNSMQQKASKPVEVTCPSKISVGAEVNANLSVH---VELSALSSPFFP---PAW 11
           + SSSST S Q  AS  +    P   SV    +   SVH    ELSA  +PFFP   PAW
Sbjct: 61  SASSSSTVSYQSLASTSI----PLVHSVRTGSSRLTSVHNASGELSASRNPFFPPSNPAW 116

Query: 10  KQD 2
             D
Sbjct: 117 NLD 119


>ref|XP_002314030.1| predicted protein [Populus trichocarpa] gi|222850438|gb|EEE87985.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/110 (59%), Positives = 83/110 (75%)
 Frame = -2

Query: 343 MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVKIATIS 164
           MSKR+LCKFFAHGACLKG+HCEFSHDWKD  NN+CTFYQKG+C YGSRCRY+HVK +   
Sbjct: 1   MSKRLLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGICVYGSRCRYDHVKPSRPE 60

Query: 163 SSSTNSMQQKASKPVEVTCPSKISVGAEVNANLSVHVELSALSSPFFPPA 14
           S++++S+   AS  V +  P++ +V + V   L+V  ELSA S PF  P+
Sbjct: 61  STASSSLTVLASTSVSLALPAR-TVSSGVRTVLAVPPELSASSRPFIAPS 109


>ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Vitis
           vinifera]
          Length = 361

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/121 (58%), Positives = 80/121 (66%), Gaps = 7/121 (5%)
 Frame = -2

Query: 343 MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVKIA--- 173
           MSKRV CKFFAHGACLKGDHCEFSHDWK   NN+CTFYQKGVCSYG RCRYEHVK++   
Sbjct: 1   MSKRVQCKFFAHGACLKGDHCEFSHDWKASPNNICTFYQKGVCSYGGRCRYEHVKVSHSQ 60

Query: 172 -TISSSSTNSMQQKASKPVEVTCPSKISVGAEVNANLSVHVELSALSSPFFP---PAWKQ 5
            +  SSST+S Q        +T PS+      + A   V  E SA S P FP   PAW Q
Sbjct: 61  PSAPSSSTSSHQLLVPDSASLTHPSRTVTNGLIPAP-GVPPEPSASSRPLFPPTQPAWNQ 119

Query: 4   D 2
           +
Sbjct: 120 E 120


>ref|XP_003546878.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max]
          Length = 363

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
 Frame = -2

Query: 343 MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVKIATIS 164
           MSKRVLCKFFAHGACLKG+HCEFSHDWKD  NN+CTFYQKGVC+YGSRCRY+HVK +   
Sbjct: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGVCAYGSRCRYDHVKASREQ 60

Query: 163 SSSTNSMQQKASKPVEVTCPSKISVGAEVNANLSVHVELSALSSPFF---PPAWKQD 2
           SS+ +S   +   PV  T     +  A  N  ++   E S   SP+F    PAW Q+
Sbjct: 61  SSAPSSSVTEPQTPVSDTVAFG-NTRATFN-GVATAAEFSLSRSPYFLPSEPAWNQE 115


>ref|XP_003599126.1| E3 ubiquitin-protein ligase makorin [Medicago truncatula]
           gi|355488174|gb|AES69377.1| E3 ubiquitin-protein ligase
           makorin [Medicago truncatula]
          Length = 420

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/118 (55%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
 Frame = -2

Query: 343 MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVKIATIS 164
           MSKRVLCKFFAHGACLKG+HCEFSHDWK   NN+CTFYQKGVC+YGSRCRY+HVK A+ +
Sbjct: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVK-ASRA 59

Query: 163 SSSTNSMQQKASKPVEVTCPSKISVGAEVNAN-LSVHVELSALSSPFFPP---AWKQD 2
            SST S      +P  +   S +     V +N ++   E S  S+PF  P   AW Q+
Sbjct: 60  QSSTPSSSITEHQP--LVSESAVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQE 115


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