BLASTX nr result

ID: Coptis21_contig00014497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014497
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...    83   2e-14
ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil dom...    82   3e-14
ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil dom...    82   3e-14
ref|XP_003603726.1| Transmembrane and coiled-coil domain-contain...    82   5e-14
ref|XP_002510477.1| conserved hypothetical protein [Ricinus comm...    82   6e-14

>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
           protein product [Vitis vinifera]
          Length = 662

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -2

Query: 357 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQMDGFYPILKASSAEPQE 187
           GLAGIQP+DVPGIENVDVTELIEGHSSYL  T  IL +L++D +YP+ + S  E Q+
Sbjct: 606 GLAGIQPVDVPGIENVDVTELIEGHSSYLWVTEDILDRLELDTYYPVFRGSPTEHQK 662


>ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4-like [Cucumis sativus]
          Length = 673

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 47/52 (90%)
 Frame = -2

Query: 357 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQMDGFYPILKASS 202
           GLAGIQPID+PGIENVDVT++IEGHSSYL  T QIL+QL+++ +YP+ ++SS
Sbjct: 619 GLAGIQPIDIPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRSSS 670


>ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4-like [Cucumis sativus]
          Length = 673

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 47/52 (90%)
 Frame = -2

Query: 357 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQMDGFYPILKASS 202
           GLAGIQPID+PGIENVDVT++IEGHSSYL  T QIL+QL+++ +YP+ ++SS
Sbjct: 619 GLAGIQPIDIPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRSSS 670


>ref|XP_003603726.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355492774|gb|AES73977.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 663

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/60 (61%), Positives = 48/60 (80%)
 Frame = -2

Query: 357 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQMDGFYPILKASSAEPQEEIS 178
           GLAGIQP+D+PGIENVDVT +IEGHSSYL  T +IL+QL++D ++ + K    +PQEE S
Sbjct: 601 GLAGIQPVDIPGIENVDVTRVIEGHSSYLWMTPKILEQLELDNYFAVYKGEHEKPQEEKS 660


>ref|XP_002510477.1| conserved hypothetical protein [Ricinus communis]
           gi|223551178|gb|EEF52664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 624

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = -2

Query: 357 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQMDGFYPILKASSAEPQEE 184
           GLAGIQP+D+PGIENVDVTE IE H+SY+C T +IL QL+++ +YP  K +  +P+EE
Sbjct: 562 GLAGIQPVDIPGIENVDVTEYIESHASYVCKTKEILDQLELESYYPDFKNAHPKPREE 619


Top