BLASTX nr result

ID: Coptis21_contig00014218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014218
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01250.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   4e-07
ref|XP_002314947.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
gb|AEQ61823.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Di...    57   3e-06

>dbj|BAK01250.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 418

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = -3

Query: 705 IVGRVLHKMQSQLDVIHVEEHPEYLLEALREAIALVGTVKCYNKL 571
           IVGRVL K+ S+L  +H+E+HP YLLEAL+EA++LVG VK Y+ L
Sbjct: 372 IVGRVLRKIPSELGRVHIEDHPAYLLEALQEALSLVGPVKGYSAL 416


>ref|XP_002314947.1| predicted protein [Populus trichocarpa] gi|222863987|gb|EEF01118.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = -3

Query: 705 IVGRVLHKMQSQLDVIHVEEHPEYLLEALREAIALVGTVKCYN 577
           IVGRVL  M+SQ  ++H+E++PE+LL+AL  A+ LVGTVKCY+
Sbjct: 365 IVGRVLSSMRSQHGLVHIEDYPEHLLQALANALDLVGTVKCYD 407


>gb|AEQ61823.1| 4Fe-4S ferredoxin iron-sulfur binding protein [Dimocarpus longan]
          Length = 109

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = -3

Query: 705 IVGRVLHKMQSQLDVIHVEEHPEYLLEALREAIALVGTVKCYN 577
           IVG VL+ +QSQ  +  +E+HP++LLEAL+ A+ALVGTVKCY+
Sbjct: 61  IVGMVLNSLQSQHGLALIEDHPDHLLEALQHALALVGTVKCYD 103