BLASTX nr result

ID: Coptis21_contig00014137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014137
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   293   4e-77
ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   286   8e-75
ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   283   5e-74
ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   282   9e-74

>ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|222869262|gb|EEF06393.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  303 bits (777), Expect = 4e-80
 Identities = 147/193 (76%), Positives = 172/193 (89%)
 Frame = -2

Query: 926 TTRITLLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGK 747
           T +  L +NL SL + VTLN  +PLPSLAIPSLN+Q PLLSPTTPFS++KNL+ GLENGK
Sbjct: 26  TLKPILFTNLFSLALTVTLN--SPLPSLAIPSLNSQPPLLSPTTPFSQSKNLQIGLENGK 83

Query: 746 IRPCPSTNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPD 567
           IRPCPSTNPGC++TNP+SSSF+FP  IP+N ++NAIQKLEEAILKTQ+NAK+QV+EDTP+
Sbjct: 84  IRPCPSTNPGCVSTNPQSSSFSFPWRIPENDTENAIQKLEEAILKTQRNAKIQVIEDTPN 143

Query: 566 GQYLQAEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVD 387
           G+YLQAEVDG F  DVLEFL++GD V YR MATKVTYVYPFTTA GDSKGQEER+KKI++
Sbjct: 144 GKYLQAEVDGGFDPDVLEFLVRGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKILN 203

Query: 386 ELGWYAPSFDSMD 348
           ELGWYAPSFDSMD
Sbjct: 204 ELGWYAPSFDSMD 216


>ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis
           vinifera] gi|297734440|emb|CBI15687.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  293 bits (751), Expect = 4e-77
 Identities = 142/192 (73%), Positives = 168/192 (87%)
 Frame = -2

Query: 923 TRITLLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKI 744
           TR  LL NL+S  + V+L  ++PL SLA+PS+N+Q+ LL PTTPFS++KNL+ GLENGKI
Sbjct: 37  TRPFLLPNLLSFALTVSL-ASSPL-SLALPSINSQSSLLPPTTPFSQSKNLQVGLENGKI 94

Query: 743 RPCPSTNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDG 564
           RPCPS NPGC++TNPKSSSF FPLTIP+  S NA+QKL+E ILKTQ+NAK+QV+EDTPDG
Sbjct: 95  RPCPSINPGCVSTNPKSSSFAFPLTIPEKYSDNAVQKLQETILKTQRNAKIQVVEDTPDG 154

Query: 563 QYLQAEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDE 384
           QYL+AEVDG FGRD++EFL+KGD V YR MATKVTYVYPFTTALGDSKGQEER+KKI+D 
Sbjct: 155 QYLRAEVDGGFGRDIMEFLVKGDVVAYRTMATKVTYVYPFTTALGDSKGQEERMKKIIDL 214

Query: 383 LGWYAPSFDSMD 348
           LGWYAPS DSMD
Sbjct: 215 LGWYAPSLDSMD 226


>ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 223

 Score =  286 bits (731), Expect = 8e-75
 Identities = 141/188 (75%), Positives = 160/188 (85%)
 Frame = -2

Query: 911 LLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKIRPCP 732
           +L NL+SL +AVTL   +PLPS AIPSLN+Q P +S TTPFS++KNL  GLENGKIRPCP
Sbjct: 37  VLPNLLSLALAVTLA--SPLPSHAIPSLNSQPPPISLTTPFSQSKNLELGLENGKIRPCP 94

Query: 731 STNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDGQYLQ 552
           S NPGCI+TNPKSSSF+FP  IP N S +AIQKL EAILKTQKN K Q +EDTPDGQYLQ
Sbjct: 95  SINPGCISTNPKSSSFSFPWLIPSNSSDDAIQKLREAILKTQKNVKFQPVEDTPDGQYLQ 154

Query: 551 AEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDELGWY 372
           AEVDG FGRD+LEFL+KGD V YRC+A KVTYVYPFTTA GDSKGQE R+K+I D+LGWY
Sbjct: 155 AEVDGGFGRDILEFLVKGDVVAYRCVAMKVTYVYPFTTAFGDSKGQEARLKQINDQLGWY 214

Query: 371 APSFDSMD 348
           APSFDSM+
Sbjct: 215 APSFDSME 222


>ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 221

 Score =  283 bits (724), Expect = 5e-74
 Identities = 140/188 (74%), Positives = 159/188 (84%)
 Frame = -2

Query: 911 LLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKIRPCP 732
           +L NL+SL +AVTL   +PLPS AIPSLN+Q+P +S TTPFS++KNL  GLENGKIRPCP
Sbjct: 35  VLPNLLSLALAVTLA--SPLPSYAIPSLNSQSPPISFTTPFSQSKNLELGLENGKIRPCP 92

Query: 731 STNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDGQYLQ 552
           S NPGCI+TNPKSSSF FP  IP N   +AIQKL EAILKTQKN K Q +ED+PDGQYLQ
Sbjct: 93  SINPGCISTNPKSSSFAFPWLIPSNSLDDAIQKLREAILKTQKNVKFQPVEDSPDGQYLQ 152

Query: 551 AEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDELGWY 372
           AEVDG FGRDV+EFL+KGD V YRC+A KVTYVYPFTTALGDSKGQE R+K+I D LGWY
Sbjct: 153 AEVDGGFGRDVIEFLVKGDVVAYRCVAMKVTYVYPFTTALGDSKGQEARLKQINDHLGWY 212

Query: 371 APSFDSMD 348
           APSFDSM+
Sbjct: 213 APSFDSME 220


>ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449474267|ref|XP_004154123.1|
           PREDICTED: thylakoid lumenal 17.9 kDa protein,
           chloroplastic-like [Cucumis sativus]
           gi|449503674|ref|XP_004162120.1| PREDICTED: thylakoid
           lumenal 17.9 kDa protein, chloroplastic-like [Cucumis
           sativus]
          Length = 232

 Score =  282 bits (722), Expect = 9e-74
 Identities = 133/187 (71%), Positives = 163/187 (87%)
 Frame = -2

Query: 908 LSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKIRPCPS 729
           LS+L+S  +++TL+  +P PS+AIPSLN+ +  LSPTTPFS++KNL TGLENGKI PCPS
Sbjct: 47  LSHLLSFALSITLS--SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS 104

Query: 728 TNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDGQYLQA 549
            NP C++TNPKSSSF FPL IPDN S N IQKL+EAIL+TQ+N K+QV+EDTP GQYL+A
Sbjct: 105 ANPSCVSTNPKSSSFAFPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEA 164

Query: 548 EVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDELGWYA 369
           EVDG+FGRDV+EFL++GD   YR MATKVTYVYPFTTALGDSKGQEER++KI+D+L WY+
Sbjct: 165 EVDGNFGRDVIEFLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYS 224

Query: 368 PSFDSMD 348
           P+FDSMD
Sbjct: 225 PTFDSMD 231


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