BLASTX nr result
ID: Coptis21_contig00014137
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014137 (1095 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|2... 303 4e-80 ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protei... 293 4e-77 ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protei... 286 8e-75 ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protei... 283 5e-74 ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protei... 282 9e-74 >ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|222869262|gb|EEF06393.1| predicted protein [Populus trichocarpa] Length = 216 Score = 303 bits (777), Expect = 4e-80 Identities = 147/193 (76%), Positives = 172/193 (89%) Frame = -2 Query: 926 TTRITLLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGK 747 T + L +NL SL + VTLN +PLPSLAIPSLN+Q PLLSPTTPFS++KNL+ GLENGK Sbjct: 26 TLKPILFTNLFSLALTVTLN--SPLPSLAIPSLNSQPPLLSPTTPFSQSKNLQIGLENGK 83 Query: 746 IRPCPSTNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPD 567 IRPCPSTNPGC++TNP+SSSF+FP IP+N ++NAIQKLEEAILKTQ+NAK+QV+EDTP+ Sbjct: 84 IRPCPSTNPGCVSTNPQSSSFSFPWRIPENDTENAIQKLEEAILKTQRNAKIQVIEDTPN 143 Query: 566 GQYLQAEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVD 387 G+YLQAEVDG F DVLEFL++GD V YR MATKVTYVYPFTTA GDSKGQEER+KKI++ Sbjct: 144 GKYLQAEVDGGFDPDVLEFLVRGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKILN 203 Query: 386 ELGWYAPSFDSMD 348 ELGWYAPSFDSMD Sbjct: 204 ELGWYAPSFDSMD 216 >ref|XP_002280221.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Vitis vinifera] gi|297734440|emb|CBI15687.3| unnamed protein product [Vitis vinifera] Length = 226 Score = 293 bits (751), Expect = 4e-77 Identities = 142/192 (73%), Positives = 168/192 (87%) Frame = -2 Query: 923 TRITLLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKI 744 TR LL NL+S + V+L ++PL SLA+PS+N+Q+ LL PTTPFS++KNL+ GLENGKI Sbjct: 37 TRPFLLPNLLSFALTVSL-ASSPL-SLALPSINSQSSLLPPTTPFSQSKNLQVGLENGKI 94 Query: 743 RPCPSTNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDG 564 RPCPS NPGC++TNPKSSSF FPLTIP+ S NA+QKL+E ILKTQ+NAK+QV+EDTPDG Sbjct: 95 RPCPSINPGCVSTNPKSSSFAFPLTIPEKYSDNAVQKLQETILKTQRNAKIQVVEDTPDG 154 Query: 563 QYLQAEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDE 384 QYL+AEVDG FGRD++EFL+KGD V YR MATKVTYVYPFTTALGDSKGQEER+KKI+D Sbjct: 155 QYLRAEVDGGFGRDIMEFLVKGDVVAYRTMATKVTYVYPFTTALGDSKGQEERMKKIIDL 214 Query: 383 LGWYAPSFDSMD 348 LGWYAPS DSMD Sbjct: 215 LGWYAPSLDSMD 226 >ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like [Glycine max] Length = 223 Score = 286 bits (731), Expect = 8e-75 Identities = 141/188 (75%), Positives = 160/188 (85%) Frame = -2 Query: 911 LLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKIRPCP 732 +L NL+SL +AVTL +PLPS AIPSLN+Q P +S TTPFS++KNL GLENGKIRPCP Sbjct: 37 VLPNLLSLALAVTLA--SPLPSHAIPSLNSQPPPISLTTPFSQSKNLELGLENGKIRPCP 94 Query: 731 STNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDGQYLQ 552 S NPGCI+TNPKSSSF+FP IP N S +AIQKL EAILKTQKN K Q +EDTPDGQYLQ Sbjct: 95 SINPGCISTNPKSSSFSFPWLIPSNSSDDAIQKLREAILKTQKNVKFQPVEDTPDGQYLQ 154 Query: 551 AEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDELGWY 372 AEVDG FGRD+LEFL+KGD V YRC+A KVTYVYPFTTA GDSKGQE R+K+I D+LGWY Sbjct: 155 AEVDGGFGRDILEFLVKGDVVAYRCVAMKVTYVYPFTTAFGDSKGQEARLKQINDQLGWY 214 Query: 371 APSFDSMD 348 APSFDSM+ Sbjct: 215 APSFDSME 222 >ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like [Glycine max] Length = 221 Score = 283 bits (724), Expect = 5e-74 Identities = 140/188 (74%), Positives = 159/188 (84%) Frame = -2 Query: 911 LLSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKIRPCP 732 +L NL+SL +AVTL +PLPS AIPSLN+Q+P +S TTPFS++KNL GLENGKIRPCP Sbjct: 35 VLPNLLSLALAVTLA--SPLPSYAIPSLNSQSPPISFTTPFSQSKNLELGLENGKIRPCP 92 Query: 731 STNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDGQYLQ 552 S NPGCI+TNPKSSSF FP IP N +AIQKL EAILKTQKN K Q +ED+PDGQYLQ Sbjct: 93 SINPGCISTNPKSSSFAFPWLIPSNSLDDAIQKLREAILKTQKNVKFQPVEDSPDGQYLQ 152 Query: 551 AEVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDELGWY 372 AEVDG FGRDV+EFL+KGD V YRC+A KVTYVYPFTTALGDSKGQE R+K+I D LGWY Sbjct: 153 AEVDGGFGRDVIEFLVKGDVVAYRCVAMKVTYVYPFTTALGDSKGQEARLKQINDHLGWY 212 Query: 371 APSFDSMD 348 APSFDSM+ Sbjct: 213 APSFDSME 220 >ref|XP_004145152.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like [Cucumis sativus] gi|449474267|ref|XP_004154123.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like [Cucumis sativus] gi|449503674|ref|XP_004162120.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like [Cucumis sativus] Length = 232 Score = 282 bits (722), Expect = 9e-74 Identities = 133/187 (71%), Positives = 163/187 (87%) Frame = -2 Query: 908 LSNLVSLTIAVTLNLNTPLPSLAIPSLNAQAPLLSPTTPFSEAKNLRTGLENGKIRPCPS 729 LS+L+S +++TL+ +P PS+AIPSLN+ + LSPTTPFS++KNL TGLENGKI PCPS Sbjct: 47 LSHLLSFALSITLS--SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS 104 Query: 728 TNPGCITTNPKSSSFTFPLTIPDNISKNAIQKLEEAILKTQKNAKVQVLEDTPDGQYLQA 549 NP C++TNPKSSSF FPL IPDN S N IQKL+EAIL+TQ+N K+QV+EDTP GQYL+A Sbjct: 105 ANPSCVSTNPKSSSFAFPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEA 164 Query: 548 EVDGSFGRDVLEFLIKGDKVVYRCMATKVTYVYPFTTALGDSKGQEERVKKIVDELGWYA 369 EVDG+FGRDV+EFL++GD YR MATKVTYVYPFTTALGDSKGQEER++KI+D+L WY+ Sbjct: 165 EVDGNFGRDVIEFLVRGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYS 224 Query: 368 PSFDSMD 348 P+FDSMD Sbjct: 225 PTFDSMD 231