BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014067
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   128   7e-28
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              128   7e-28
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   127   1e-27
gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 190...   123   2e-26
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops...   123   2e-26

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score =  128 bits (321), Expect = 7e-28
 Identities = 59/73 (80%), Positives = 65/73 (89%)
 Frame = +2

Query: 5   ESRKFGNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVF 184
           E  KFGNLVNVAIPRP  NGEP+PG+GKVFLEYAD DGA+KARTG+NGRKF GN VVAVF
Sbjct: 496 EGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVF 555

Query: 185 YPEDKFSHGDYDG 223
           YPE+KFS G+YDG
Sbjct: 556 YPENKFSQGEYDG 568


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  128 bits (321), Expect = 7e-28
 Identities = 59/73 (80%), Positives = 65/73 (89%)
 Frame = +2

Query: 5   ESRKFGNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVF 184
           E  KFGNLVNVAIPRP  NGEP+PG+GKVFLEYAD DGA+KARTG+NGRKF GN VVAVF
Sbjct: 321 EGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVF 380

Query: 185 YPEDKFSHGDYDG 223
           YPE+KFS G+YDG
Sbjct: 381 YPENKFSQGEYDG 393


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  127 bits (319), Expect = 1e-27
 Identities = 59/73 (80%), Positives = 64/73 (87%)
 Frame = +2

Query: 5   ESRKFGNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAVF 184
           E  KFGNLVNVAIPRP  NGEP+PG+GKVFLEYAD DGA KARTG+NGRKF GN VVAVF
Sbjct: 493 EGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVF 552

Query: 185 YPEDKFSHGDYDG 223
           YPE+KFS G+YDG
Sbjct: 553 YPENKFSQGEYDG 565


>gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
           thaliana]
          Length = 568

 Score =  123 bits (309), Expect = 2e-26
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   EESRKFGNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAV 181
           +E  KFGNLVNV IPRPN + +P+PGVGKVFLEYAD DG+SKAR+GMNGRKFGGN VVAV
Sbjct: 495 QEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAV 554

Query: 182 FYPEDKFSHGDYD 220
           +YPEDK++ GDY+
Sbjct: 555 YYPEDKYAQGDYE 567


>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
           gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
           Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|332195625|gb|AEE33746.1| Splicing factor
           U2af large subunit B [Arabidopsis thaliana]
          Length = 589

 Score =  123 bits (309), Expect = 2e-26
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   EESRKFGNLVNVAIPRPNANGEPSPGVGKVFLEYADTDGASKARTGMNGRKFGGNPVVAV 181
           +E  KFGNLVNV IPRPN + +P+PGVGKVFLEYAD DG+SKAR+GMNGRKFGGN VVAV
Sbjct: 516 QEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAV 575

Query: 182 FYPEDKFSHGDYD 220
           +YPEDK++ GDY+
Sbjct: 576 YYPEDKYAQGDYE 588