BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013998
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509528.1| structural constituent of ribosome, putative...   122   1e-25
ref|XP_003553248.1| PREDICTED: uncharacterized protein LOC100780...   109   6e-22
ref|NP_566809.1| ribosomal protein S21 family protein [Arabidops...   108   1e-21
ref|XP_003550088.1| PREDICTED: uncharacterized protein LOC100812...   108   1e-21
ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arab...   108   1e-21

>ref|XP_002509528.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223549427|gb|EEF50915.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 175

 Score =  122 bits (305), Expect = 1e-25
 Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
 Frame = -1

Query: 635 SHSKSLPLTSTPIVAAST-VEAIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXX 459
           S SK +PL +    + ST + + ++PSLANANI+FF+S YNVQ++VD+            
Sbjct: 41  SKSKLIPLAAHDSGSLSTELSSAINPSLANANILFFRSAYNVQVIVDDNEPEERLLNRFR 100

Query: 458 XXVSKAGVIPETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPALPKEVE 279
             V +AGVI E +RRR+FEN Q+EKKR+TR+AAK+N+KRR   R  T    + +  K+ +
Sbjct: 101 REVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNKKRRPQSRFTTQNKQETSTTKKDD 160

Query: 278 DD-DNWDMPEGGLPY 237
           DD DNW++PEG LPY
Sbjct: 161 DDGDNWELPEGDLPY 175


>ref|XP_003553248.1| PREDICTED: uncharacterized protein LOC100780245 [Glycine max]
          Length = 202

 Score =  109 bits (273), Expect = 6e-22
 Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = -1

Query: 593 AASTVEAIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXXXVSKAGVIPETRRR 414
           +++ + A+ +PS A+AN +FF+S YNVQ++VDE              V +AGVI E +RR
Sbjct: 79  SSAELSAVANPSHAHANTLFFRSAYNVQVVVDENEPEERLLNRFRREVMRAGVIQECKRR 138

Query: 413 RYFENSQEEKKRRTRDAAK-KNRKRRWAPRIPTPTAGDPALPKEVEDDDNWDMPEGGLPY 237
           R+FEN QEEKKR+ R+AAK K+R RR   R       D A  K+ EDDDNWD+PE   PY
Sbjct: 139 RFFENKQEEKKRKNREAAKRKSRSRRSQSRFQPQNKPDVAATKKEEDDDNWDLPEVDAPY 198


>ref|NP_566809.1| ribosomal protein S21 family protein [Arabidopsis thaliana]
           gi|9294081|dbj|BAB01933.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643753|gb|AEE77274.1|
           ribosomal protein S21 family protein [Arabidopsis
           thaliana]
          Length = 183

 Score =  108 bits (271), Expect = 1e-21
 Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
 Frame = -1

Query: 611 TSTPIVAASTVEAIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXXXVSKAGVI 432
           +ST    +S + +++ PSLA +N +FF SGYNVQ+ V++              V + GVI
Sbjct: 55  SSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVMRTGVI 114

Query: 431 PETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPAL----PKEVEDDDNW 264
            E +RRRYFEN Q+EKKRRTRDAAK+N+KRR   R    T  + A      K+ E++DNW
Sbjct: 115 QECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDEEEDNW 174

Query: 263 DMPEGGLP 240
           +MP G +P
Sbjct: 175 EMPGGDVP 182


>ref|XP_003550088.1| PREDICTED: uncharacterized protein LOC100812464 [Glycine max]
          Length = 169

 Score =  108 bits (270), Expect = 1e-21
 Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
 Frame = -1

Query: 581 VEAIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXXXVSKAGVIPETRRRRYFE 402
           V A+ +PS A+A  +FF+S YNVQ++V+E              V +AGVI E +RRR+FE
Sbjct: 50  VSAVANPSHAHAKTLFFRSAYNVQVVVEENEPEERLLNRFRREVMRAGVIQECKRRRFFE 109

Query: 401 NSQEEKKRRTRDAAK-KNRKRRWAPRIPTPTAGDPALPKEVEDDDNWDMPEGGLPY 237
           N QEEKKR+TR+AAK K+R RR+  +       D A  K+ EDDDNWD+PE   PY
Sbjct: 110 NKQEEKKRKTREAAKRKSRSRRFQSKFQPQNKPDVAATKKEEDDDNWDLPEVDAPY 165


>ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp.
           lyrata] gi|297321197|gb|EFH51618.1| hypothetical protein
           ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score =  108 bits (270), Expect = 1e-21
 Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
 Frame = -1

Query: 611 TSTPIVAASTVEAIVSPSLANANIMFFKSGYNVQIMVDEGXXXXXXXXXXXXXVSKAGVI 432
           +ST    +S + +++ PSLA +N +FF SGYNVQ+ V++              V + GVI
Sbjct: 55  SSTASSISSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVMRTGVI 114

Query: 431 PETRRRRYFENSQEEKKRRTRDAAKKNRKRRWAPRIPTPTAGDPAL-----PKEVEDDDN 267
            E +RRRYFEN Q+EKKRRTRDAAK+N+KRR   R    T  + A       K+ E++DN
Sbjct: 115 QECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAAATKSKKKDEEEDN 174

Query: 266 WDMPEGGLP 240
           W+MP G +P
Sbjct: 175 WEMPGGDVP 183