BLASTX nr result

ID: Coptis21_contig00013990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013990
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehyd...    65   6e-09
ref|XP_003593285.1| Methylmalonate-semialdehyde dehydrogenase [M...    60   2e-07
gb|ABD28558.2| Aldehyde dehydrogenase [Medicago truncatula]            60   2e-07
ref|XP_003531010.1| PREDICTED: methylmalonate-semialdehyde dehyd...    58   7e-07
gb|ABK95002.1| unknown [Populus trichocarpa]                           58   9e-07

>ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
           mitochondrial [Vitis vinifera]
           gi|296085606|emb|CBI29381.3| unnamed protein product
           [Vitis vinifera]
          Length = 539

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
 Frame = -2

Query: 196 MLHFSLGRGRSFNAWK-----MTTSHFSTATNVSP---TPVRLRNLIGGEFVESESKETI 41
           ML FSL R R+F + +     +  S FSTAT  S     P R+ NLIGG FV+S+S E I
Sbjct: 1   MLRFSLQRVRNFKSLRPELFALGNSRFSTATEPSSKQRNPPRVPNLIGGSFVDSQSSEFI 60

Query: 40  DVLNPATQEVVSQ 2
           DV+NPATQ+VVSQ
Sbjct: 61  DVINPATQQVVSQ 73


>ref|XP_003593285.1| Methylmalonate-semialdehyde dehydrogenase [Medicago truncatula]
           gi|355482333|gb|AES63536.1| Methylmalonate-semialdehyde
           dehydrogenase [Medicago truncatula]
          Length = 510

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = -2

Query: 148 MTTSHFSTATNVSPTPVRLRNLIGGEFVESESKETIDVLNPATQEVVSQ 2
           M TSHFST +N    P+++ NLIGG+F+ES+S   IDV+NPATQEV+SQ
Sbjct: 1   MATSHFSTQSN----PLKVPNLIGGKFIESKSLTFIDVINPATQEVLSQ 45


>gb|ABD28558.2| Aldehyde dehydrogenase [Medicago truncatula]
          Length = 536

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = -2

Query: 148 MTTSHFSTATNVSPTPVRLRNLIGGEFVESESKETIDVLNPATQEVVSQ 2
           M TSHFST +N    P+++ NLIGG+F+ES+S   IDV+NPATQEV+SQ
Sbjct: 1   MATSHFSTQSN----PLKVPNLIGGKFIESKSLTFIDVINPATQEVLSQ 45


>ref|XP_003531010.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
           mitochondrial-like [Glycine max]
          Length = 541

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
 Frame = -2

Query: 199 KMLHFSLGRGRSFNAWK-----MTTSHFSTATNVSPT---PVRLRNLIGGEFVESESKET 44
           +ML  S+ R R  N  +     +  SH STA   S +   P R+ NLIGG FV+S++   
Sbjct: 4   RMLRLSIQRVRKLNFLRPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTV 63

Query: 43  IDVLNPATQEVVSQ 2
           IDV+NPATQEVVSQ
Sbjct: 64  IDVINPATQEVVSQ 77


>gb|ABK95002.1| unknown [Populus trichocarpa]
          Length = 542

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 10/74 (13%)
 Frame = -2

Query: 193 LHFSLGRGRSFNAWK-----MTTSHFSTATNVSPT-----PVRLRNLIGGEFVESESKET 44
           L  S+ R R+  A K     + +S++ +   V P+     P R+ NLIGG+FV+S+S  T
Sbjct: 4   LKISIQRARNLKALKPSIFALRSSYYFSTGVVEPSSSLRSPPRVPNLIGGKFVDSQSSST 63

Query: 43  IDVLNPATQEVVSQ 2
           IDV+NPATQEVVSQ
Sbjct: 64  IDVINPATQEVVSQ 77


Top