BLASTX nr result

ID: Coptis21_contig00013989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013989
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277845.1| PREDICTED: uncharacterized protein C9orf114 ...   414   e-113
emb|CAN75987.1| hypothetical protein VITISV_012192 [Vitis vinifera]   413   e-113
ref|XP_003631986.1| PREDICTED: uncharacterized protein C9orf114 ...   396   e-108
ref|XP_002311607.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_002517202.1| Protein C9orf114, putative [Ricinus communis...   392   e-106

>ref|XP_002277845.1| PREDICTED: uncharacterized protein C9orf114 isoform 1 [Vitis
           vinifera] gi|297737011|emb|CBI26212.3| unnamed protein
           product [Vitis vinifera]
          Length = 363

 Score =  414 bits (1064), Expect = e-113
 Identities = 199/275 (72%), Positives = 232/275 (84%)
 Frame = +1

Query: 1   QIARAAAIFRVDEIVVFDNKNTAMHDSSVXXXXXXXXXXXXAPFLIRILKYLETPQYLRR 180
           QIARAA IFR+DE+VVFD K+T+  DS+V              FLIRIL+YLETPQYLR+
Sbjct: 77  QIARAATIFRIDEVVVFDCKSTSGDDSTVATPDASDENETGPAFLIRILRYLETPQYLRK 136

Query: 181 SLFPMHSSLRCVGTLPPLDAPHHLRKHEWGSYREGITLKEKTSDLTGTLVDVGLSRNVVV 360
           +LFP H+SL+ VG LPP+DAPHHLRKHEWG YREG+TLKE+     GTLVDVGL++NVV+
Sbjct: 137 TLFPKHNSLKFVGMLPPVDAPHHLRKHEWGPYREGVTLKERAPSSVGTLVDVGLNKNVVI 196

Query: 361 DETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMPREDAGLYWGYKVRYASNISSVFKDCP 540
           D+ LEPGIRVTVAMGTNR+   + +H+VV SS PRE+ G YWGYKVRYASNISSVFK+CP
Sbjct: 197 DQVLEPGIRVTVAMGTNRNLDADFVHQVVSSSKPREEVGTYWGYKVRYASNISSVFKECP 256

Query: 541 YTGGYDHTIGTSEHGLIIKSSELTIPTFSHLLIAFGGLAGLEESIEEDGSLKGKDANKVF 720
           + GGYDH IGTSEHGLI+KSSEL IP+F HLLIAFGGLAGLEES+EED SLKGK+  ++F
Sbjct: 257 FKGGYDHLIGTSEHGLIVKSSELDIPSFRHLLIAFGGLAGLEESVEEDNSLKGKNVREIF 316

Query: 721 ESYLNTCPHQGSRTIRTEEAILISLQYFQEPISRA 825
           +SYLNTCP+QGSRTIRTEEAILISLQYFQEPI+RA
Sbjct: 317 DSYLNTCPNQGSRTIRTEEAILISLQYFQEPINRA 351


>emb|CAN75987.1| hypothetical protein VITISV_012192 [Vitis vinifera]
          Length = 363

 Score =  413 bits (1061), Expect = e-113
 Identities = 199/275 (72%), Positives = 232/275 (84%)
 Frame = +1

Query: 1   QIARAAAIFRVDEIVVFDNKNTAMHDSSVXXXXXXXXXXXXAPFLIRILKYLETPQYLRR 180
           Q+ARAA IFR+DE+VVFD K+T+  +S+V            A FLIRIL+YLETPQYLR+
Sbjct: 77  QVARAATIFRIDEVVVFDCKSTSGDNSTVATPDASDENETGAAFLIRILRYLETPQYLRK 136

Query: 181 SLFPMHSSLRCVGTLPPLDAPHHLRKHEWGSYREGITLKEKTSDLTGTLVDVGLSRNVVV 360
            LFP H+SL+ VG LPPLDAPHHLRKHEWG YREG+TLKE+     GTLVDVGL++NVV+
Sbjct: 137 ILFPKHNSLKFVGMLPPLDAPHHLRKHEWGPYREGVTLKERAPSSVGTLVDVGLNKNVVI 196

Query: 361 DETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMPREDAGLYWGYKVRYASNISSVFKDCP 540
           D+ LEPGIRVTVAMGTNR+   + +H+VV SS PRE+ G YWGYKVRYASNISSVFK+CP
Sbjct: 197 DQVLEPGIRVTVAMGTNRNLDADFVHQVVSSSKPREEVGTYWGYKVRYASNISSVFKECP 256

Query: 541 YTGGYDHTIGTSEHGLIIKSSELTIPTFSHLLIAFGGLAGLEESIEEDGSLKGKDANKVF 720
           + GGYDH IGTSEHGLI+KSSEL IP+F HLLIAFGGLAGLEES+EED SLKGK+  ++F
Sbjct: 257 FKGGYDHLIGTSEHGLIVKSSELDIPSFRHLLIAFGGLAGLEESVEEDHSLKGKNVREIF 316

Query: 721 ESYLNTCPHQGSRTIRTEEAILISLQYFQEPISRA 825
           +SYLNTCP+QGSRTIRTEEAILISLQYFQEPI+RA
Sbjct: 317 DSYLNTCPNQGSRTIRTEEAILISLQYFQEPINRA 351


>ref|XP_003631986.1| PREDICTED: uncharacterized protein C9orf114 isoform 2 [Vitis
           vinifera]
          Length = 359

 Score =  396 bits (1017), Expect = e-108
 Identities = 194/276 (70%), Positives = 226/276 (81%), Gaps = 1/276 (0%)
 Frame = +1

Query: 1   QIARAAAIFRVDEIVVFDNKNTAMHDSSVXXXXXXXXXXXXAP-FLIRILKYLETPQYLR 177
           QIARAA IFR+DE+ +  N +      SV             P FLIRIL+YLETPQYLR
Sbjct: 77  QIARAATIFRIDEVCIVMNSSR-----SVELLINASDENETGPAFLIRILRYLETPQYLR 131

Query: 178 RSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGSYREGITLKEKTSDLTGTLVDVGLSRNVV 357
           ++LFP H+SL+ VG LPP+DAPHHLRKHEWG YREG+TLKE+     GTLVDVGL++NVV
Sbjct: 132 KTLFPKHNSLKFVGMLPPVDAPHHLRKHEWGPYREGVTLKERAPSSVGTLVDVGLNKNVV 191

Query: 358 VDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMPREDAGLYWGYKVRYASNISSVFKDC 537
           +D+ LEPGIRVTVAMGTNR+   + +H+VV SS PRE+ G YWGYKVRYASNISSVFK+C
Sbjct: 192 IDQVLEPGIRVTVAMGTNRNLDADFVHQVVSSSKPREEVGTYWGYKVRYASNISSVFKEC 251

Query: 538 PYTGGYDHTIGTSEHGLIIKSSELTIPTFSHLLIAFGGLAGLEESIEEDGSLKGKDANKV 717
           P+ GGYDH IGTSEHGLI+KSSEL IP+F HLLIAFGGLAGLEES+EED SLKGK+  ++
Sbjct: 252 PFKGGYDHLIGTSEHGLIVKSSELDIPSFRHLLIAFGGLAGLEESVEEDNSLKGKNVREI 311

Query: 718 FESYLNTCPHQGSRTIRTEEAILISLQYFQEPISRA 825
           F+SYLNTCP+QGSRTIRTEEAILISLQYFQEPI+RA
Sbjct: 312 FDSYLNTCPNQGSRTIRTEEAILISLQYFQEPINRA 347


>ref|XP_002311607.1| predicted protein [Populus trichocarpa] gi|222851427|gb|EEE88974.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  394 bits (1012), Expect = e-107
 Identities = 193/278 (69%), Positives = 223/278 (80%), Gaps = 1/278 (0%)
 Frame = +1

Query: 1   QIARAAAIFRVDEIVVFDNK-NTAMHDSSVXXXXXXXXXXXXAPFLIRILKYLETPQYLR 177
           QIARAA IFR+DE+VVFDNK N    D ++            A F +RIL+YLETPQYLR
Sbjct: 85  QIARAATIFRIDEVVVFDNKSNYEKEDRTLTTDNYSDENESGAAFFVRILRYLETPQYLR 144

Query: 178 RSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGSYREGITLKEKTSDLTGTLVDVGLSRNVV 357
           ++LFP H +LR VG LPPLDAPHHLRKHEW  +REG+TL EK  +   TLVDVGLS+NV 
Sbjct: 145 KALFPKHCNLRFVGMLPPLDAPHHLRKHEWAPFREGVTLNEKVPNSGETLVDVGLSKNVS 204

Query: 358 VDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMPREDAGLYWGYKVRYASNISSVFKDC 537
           +++ LEPGIRVTVAMGTNR+  ++   +VV    PRE+AG+YWGY+VRYASNISSVFKDC
Sbjct: 205 INQVLEPGIRVTVAMGTNRNLDSDSPRQVVSLLKPREEAGMYWGYRVRYASNISSVFKDC 264

Query: 538 PYTGGYDHTIGTSEHGLIIKSSELTIPTFSHLLIAFGGLAGLEESIEEDGSLKGKDANKV 717
           PY GGYDH IGTSEHGLII SSEL++P F HLLIAFGGLAGLEE IEED +LKGK+  +V
Sbjct: 265 PYKGGYDHLIGTSEHGLIINSSELSLPAFRHLLIAFGGLAGLEECIEEDSNLKGKNVREV 324

Query: 718 FESYLNTCPHQGSRTIRTEEAILISLQYFQEPISRATH 831
           F+SYLNTCPHQGSRTIRTEEAI ISLQYFQEPI+RA H
Sbjct: 325 FDSYLNTCPHQGSRTIRTEEAIFISLQYFQEPINRALH 362


>ref|XP_002517202.1| Protein C9orf114, putative [Ricinus communis]
           gi|223543837|gb|EEF45365.1| Protein C9orf114, putative
           [Ricinus communis]
          Length = 369

 Score =  392 bits (1006), Expect = e-106
 Identities = 191/277 (68%), Positives = 229/277 (82%), Gaps = 2/277 (0%)
 Frame = +1

Query: 1   QIARAAAIFRVDEIVVFDNKNTAMHD--SSVXXXXXXXXXXXXAPFLIRILKYLETPQYL 174
           QIARAA IFR+DE+VVFDN+++++ +  +++            A FLIRIL+YLETPQYL
Sbjct: 87  QIARAATIFRIDEVVVFDNESSSVKEDRTTMITGNNSDENESGAAFLIRILRYLETPQYL 146

Query: 175 RRSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGSYREGITLKEKTSDLTGTLVDVGLSRNV 354
           R++LFP  +SLR VG LPPLDAPHHLRKHEW  +REG+TLKEK  +  GTLVDVGLS+NV
Sbjct: 147 RKALFPRLNSLRFVGLLPPLDAPHHLRKHEWAPFREGVTLKEKAPNSIGTLVDVGLSKNV 206

Query: 355 VVDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMPREDAGLYWGYKVRYASNISSVFKD 534
           V+D+ +EPGIRVTV MGT+R+  +E   +VV  S PRE+AG+YWGY+VRYASNIS+VF D
Sbjct: 207 VIDQVVEPGIRVTVEMGTDRNLDSELPRQVVSLSKPREEAGMYWGYRVRYASNISTVFND 266

Query: 535 CPYTGGYDHTIGTSEHGLIIKSSELTIPTFSHLLIAFGGLAGLEESIEEDGSLKGKDANK 714
           CPY GGYDH +GTSEHG II +S+L++PTF HLLIAFGGLAGLEESIEED SLKGK+  +
Sbjct: 267 CPYKGGYDHLVGTSEHGQIINASKLSLPTFRHLLIAFGGLAGLEESIEEDNSLKGKNVRE 326

Query: 715 VFESYLNTCPHQGSRTIRTEEAILISLQYFQEPISRA 825
           VF SYLNTCPHQGSRTIRTEEAI ISLQYFQEPI+RA
Sbjct: 327 VFNSYLNTCPHQGSRTIRTEEAIFISLQYFQEPINRA 363


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