BLASTX nr result

ID: Coptis21_contig00013983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013983
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...   328   2e-87
emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]   325   1e-86
emb|CBI24338.3| unnamed protein product [Vitis vinifera]              307   5e-81
ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, pu...   302   1e-79
ref|XP_002304791.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-77

>ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis
            vinifera]
          Length = 269

 Score =  328 bits (842), Expect = 2e-87
 Identities = 160/253 (63%), Positives = 194/253 (76%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1335 AIEDWTIVTSRRGRQKKRYVP-KTGITEQQPWAPTDLEIDVARETKLMQKMQMCIRKLES 1159
            AI DWT+V  RRG++++ ++  K     QQPWAPTDLE+D+ RE+KLMQK+Q+CIRKL +
Sbjct: 15   AISDWTVVLPRRGKRRRNFLKSKHPEQHQQPWAPTDLEMDLHRESKLMQKIQICIRKLGN 74

Query: 1158 SDFYRAFLDQMKTLEVLTYFLRILGSETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKF 979
            S FY   LDQ++T  +L  FLR+LGSE KMQMV+YGIGSIESY+ PRLQLS AIL+KRKF
Sbjct: 75   STFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPPRLQLSLAILLKRKF 134

Query: 978  DWIGDIEVFDPVLSKTETNALEALGCTVLKVNEQGRRQVVKPTMFFMPHCEAVLYDNLLQ 799
             WIGDI+VFDP+LS TE+  LEALGC+VL VNEQGRRQ  KPT+FFMPHCEA LYDNLLQ
Sbjct: 135  SWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFFMPHCEAELYDNLLQ 194

Query: 798  ANWRPENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFF 619
             NWR E +N +VLFGNSF  YEQ+VSEF++S +VDS+R +L                 +F
Sbjct: 195  ENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKFTREFAIKTVSDDYF 254

Query: 618  RAFHDSSWHFFKL 580
             AFHDSSWHFF L
Sbjct: 255  GAFHDSSWHFFSL 267


>emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]
          Length = 269

 Score =  325 bits (834), Expect = 1e-86
 Identities = 159/253 (62%), Positives = 192/253 (75%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1335 AIEDWTIVTSRRGRQKKRYVP-KTGITEQQPWAPTDLEIDVARETKLMQKMQMCIRKLES 1159
            AI DWT+V   RG+ ++ ++  K     QQPWAPTDLE+D+ RE+KLMQK+Q+CIRKL +
Sbjct: 15   AISDWTVVLPXRGKXRRNFLKSKHPEQHQQPWAPTDLEMDLHRESKLMQKIQICIRKLGN 74

Query: 1158 SDFYRAFLDQMKTLEVLTYFLRILGSETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKF 979
            S FY   LDQ++T  +L  FLR+LGSE KMQMV+YGIGSIESY+ PRLQLS AIL+KRKF
Sbjct: 75   STFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPPRLQLSLAILLKRKF 134

Query: 978  DWIGDIEVFDPVLSKTETNALEALGCTVLKVNEQGRRQVVKPTMFFMPHCEAVLYDNLLQ 799
             WIGDI+VFDP+LS TE+  LEALGC+VL VNEQGRRQ  KPT+FFMPHCEA LYDNLLQ
Sbjct: 135  SWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFFMPHCEAELYDNLLQ 194

Query: 798  ANWRPENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFF 619
             NWR E +N +VLFGNSF  YEQ+VSEF++S +VDS+R +L                 +F
Sbjct: 195  ENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKFTREFAIKTVSDDYF 254

Query: 618  RAFHDSSWHFFKL 580
             AFHDSSWHFF L
Sbjct: 255  GAFHDSSWHFFSL 267


>emb|CBI24338.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  307 bits (786), Expect = 5e-81
 Identities = 153/253 (60%), Positives = 186/253 (73%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1335 AIEDWTIVTSRRGRQKKRYVP-KTGITEQQPWAPTDLEIDVARETKLMQKMQMCIRKLES 1159
            AI DWT+V  RRG++++ ++  K     QQPWAPTDLE+D+ RE+KLMQK+Q+CIRKL +
Sbjct: 15   AISDWTVVLPRRGKRRRNFLKSKHPEQHQQPWAPTDLEMDLHRESKLMQKIQICIRKLGN 74

Query: 1158 SDFYRAFLDQMKTLEVLTYFLRILGSETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKF 979
            S FY   LDQ++T  +L  FLR         MV+YGIGSIESY+ PRLQLS AIL+KRKF
Sbjct: 75   STFYHVLLDQVQTPHMLEAFLR---------MVVYGIGSIESYEPPRLQLSLAILLKRKF 125

Query: 978  DWIGDIEVFDPVLSKTETNALEALGCTVLKVNEQGRRQVVKPTMFFMPHCEAVLYDNLLQ 799
             WIGDI+VFDP+LS TE+  LEALGC+VL VNEQGRRQ  KPT+FFMPHCEA LYDNLLQ
Sbjct: 126  SWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFFMPHCEAELYDNLLQ 185

Query: 798  ANWRPENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFF 619
             NWR E +N +VLFGNSF  YEQ+VSEF++S +VDS+R +L                 +F
Sbjct: 186  ENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKFTREFAIKTVSDDYF 245

Query: 618  RAFHDSSWHFFKL 580
             AFHDSSWHFF L
Sbjct: 246  GAFHDSSWHFFSL 258


>ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus communis]
            gi|223539889|gb|EEF41468.1| Protein SENSITIVITY TO RED
            LIGHT REDUCED, putative [Ricinus communis]
          Length = 276

 Score =  302 bits (774), Expect = 1e-79
 Identities = 148/256 (57%), Positives = 189/256 (73%)
 Frame = -1

Query: 1326 DWTIVTSRRGRQKKRYVPKTGITEQQPWAPTDLEIDVARETKLMQKMQMCIRKLESSDFY 1147
            +WT+V  R  R +     +T   +QQPW P DLE D  R++KL++KM +C++K+E+S FY
Sbjct: 18   EWTVVLPRGKRSRNFSKIRTPEEQQQPWVPADLESDSNRQSKLIEKMNICMKKVENSQFY 77

Query: 1146 RAFLDQMKTLEVLTYFLRILGSETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDWIG 967
            +  L+Q++T E L  F ++LGSE KMQMVIYGIGSIESY+ PR+QLS AIL+K++F WIG
Sbjct: 78   QTLLEQIQTPESLDSFHKVLGSELKMQMVIYGIGSIESYETPRIQLSVAILMKKEFSWIG 137

Query: 966  DIEVFDPVLSKTETNALEALGCTVLKVNEQGRRQVVKPTMFFMPHCEAVLYDNLLQANWR 787
            DIEVFDPVLS TE+  LEALGC+VL VNE GRR V +PT+F+MPHCEA LY+NLLQANWR
Sbjct: 138  DIEVFDPVLSATESRVLEALGCSVLSVNEHGRRCVTRPTLFYMPHCEAELYNNLLQANWR 197

Query: 786  PENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRAFH 607
             E LN++ LFGNSFE Y QY+SEF+NS IVDS+R ++                 +F AFH
Sbjct: 198  VELLNRIALFGNSFEVY-QYLSEFRNSTIVDSSRHIVAVREFTHEYVIKTVSDDYFAAFH 256

Query: 606  DSSWHFFKLDPQIELE 559
            DSSWHFF  DP+ EL+
Sbjct: 257  DSSWHFFSPDPKTELQ 272


>ref|XP_002304791.1| predicted protein [Populus trichocarpa] gi|222842223|gb|EEE79770.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score =  296 bits (757), Expect = 1e-77
 Identities = 151/264 (57%), Positives = 188/264 (71%), Gaps = 1/264 (0%)
 Frame = -1

Query: 1329 EDWTIVTSRRGRQKKRYVP-KTGITEQQPWAPTDLEIDVARETKLMQKMQMCIRKLESSD 1153
            E+WT+V  RRG+++   +   T   EQQPW PT+LE D  RE KL+QKM+ CI+K+ESS 
Sbjct: 17   ENWTVVMPRRGKKRIHSLRHNTPEAEQQPWVPTELESDPEREAKLIQKMEFCIKKVESSR 76

Query: 1152 FYRAFLDQMKTLEVLTYFLRILGSETKMQMVIYGIGSIESYDCPRLQLSFAILIKRKFDW 973
            FY+ FL+Q++  E+L  F R+LG E KM MVIYGIGSIESY+ PR QLS AIL+KRKF W
Sbjct: 77   FYQNFLEQVENPEILDSFHRVLGFELKMPMVIYGIGSIESYETPRFQLSLAILMKRKFCW 136

Query: 972  IGDIEVFDPVLSKTETNALEALGCTVLKVNEQGRRQVVKPTMFFMPHCEAVLYDNLLQAN 793
            IGDIEVFDP+LS TE+  LE+LGC+VL VNEQGRR+  KP +F+MPHCEA LY+NLLQAN
Sbjct: 137  IGDIEVFDPILSATESRVLESLGCSVLSVNEQGRRRATKPMLFYMPHCEAGLYNNLLQAN 196

Query: 792  WRPENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLGXXXXXXXXXXXXXXXXFFRA 613
            W  E LN +VLFGNSFE YE + SE KNS++V+S   VL                 +F A
Sbjct: 197  WELELLNHIVLFGNSFEMYE-FFSEIKNSIVVESTMHVLAARKFANEYVIKTASDDYFAA 255

Query: 612  FHDSSWHFFKLDPQIELESETLKS 541
            FHDSSWHFF   P ++ E   +K+
Sbjct: 256  FHDSSWHFF--SPALDTELLLVKN 277


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