BLASTX nr result

ID: Coptis21_contig00013969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013969
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247...   164   9e-39
ref|XP_002326837.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
emb|CAN67201.1| hypothetical protein VITISV_032278 [Vitis vinifera]   155   4e-36
emb|CBI16633.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35

>ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247848 [Vitis vinifera]
          Length = 305

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/105 (72%), Positives = 89/105 (84%)
 Frame = +1

Query: 142 SSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINR 321
           S   QNV+VMRHGDR+DN EPLW +TA RPWDPPL D GKVRAF TGRKLR+ LGFPI+R
Sbjct: 46  SQHFQNVVVMRHGDRLDNTEPLWVSTAARPWDPPLADPGKVRAFCTGRKLRSQLGFPIHR 105

Query: 322 VIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKV 456
           V+VSPF RC+QTASEV+SALCA++DD  V  +GD ++IDPSKLKV
Sbjct: 106 VLVSPFLRCVQTASEVISALCAIDDDP-VNMTGDGVAIDPSKLKV 149


>ref|XP_002326837.1| predicted protein [Populus trichocarpa] gi|222835152|gb|EEE73587.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/110 (70%), Positives = 89/110 (80%)
 Frame = +1

Query: 124 PTNTPASSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNL 303
           P N  A  + QNV+VMRHGDRIDN EPLW TTA RPWDPPL+++G++RAF TGRKL+ NL
Sbjct: 6   PENNDAKHQ-QNVVVMRHGDRIDNFEPLWITTATRPWDPPLVEAGRLRAFRTGRKLKTNL 64

Query: 304 GFPINRVIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLK 453
           GFPI+RV VSPF RCIQTASEVVSALCAVND   +  S   ++IDPSKLK
Sbjct: 65  GFPIHRVFVSPFLRCIQTASEVVSALCAVNDGPDI-VSSHGVAIDPSKLK 113


>emb|CAN67201.1| hypothetical protein VITISV_032278 [Vitis vinifera]
          Length = 154

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/105 (68%), Positives = 87/105 (82%)
 Frame = +1

Query: 142 SSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINR 321
           S   QNV+VMRHGDR+DN+EPLW +TA RPWDPPL D GKVRAF TGR   + LGFPI+R
Sbjct: 46  SQHFQNVVVMRHGDRLDNSEPLWVSTAARPWDPPLADPGKVRAFCTGRNHLSQLGFPIHR 105

Query: 322 VIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKV 456
           V+VSPF RC+QTASEV+SALCA+++D  V  +GD ++IDPSKLKV
Sbjct: 106 VLVSPFLRCVQTASEVISALCAIDNDP-VNMTGDGVAIDPSKLKV 149


>emb|CBI16633.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/96 (73%), Positives = 83/96 (86%)
 Frame = +1

Query: 169 MRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINRVIVSPFTRC 348
           MRHGDR+DN EPLW +TA RPWDPPL D GKVRAF TGRKLR+ LGFPI+RV+VSPF RC
Sbjct: 1   MRHGDRLDNTEPLWVSTAARPWDPPLADPGKVRAFCTGRKLRSQLGFPIHRVLVSPFLRC 60

Query: 349 IQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKV 456
           +QTASEV+SALCA++DD  V  +GD ++IDPSKLKV
Sbjct: 61  VQTASEVISALCAIDDDP-VNMTGDGVAIDPSKLKV 95


>ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|222844235|gb|EEE81782.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/113 (67%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
 Frame = +1

Query: 121 PPTNTPASS-RVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRN 297
           P  NT   S  +QNV+VMRHGDRID+ EPLW TTA RPWDPPL+++G++RAF TGRKL+ 
Sbjct: 6   PENNTINDSIHLQNVVVMRHGDRIDSLEPLWVTTATRPWDPPLVEAGRIRAFCTGRKLKT 65

Query: 298 NLGFPINRVIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKV 456
           +LGFPI+RV VSPF RCIQTASEVVSALCAV+D   V  S   ++ID SKLKV
Sbjct: 66  DLGFPIHRVFVSPFLRCIQTASEVVSALCAVDDGPDV-VSSLGVTIDSSKLKV 117


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