BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013964
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   214   2e-53
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   191   2e-46
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   182   1e-43
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi...   175   2e-41

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  214 bits (546), Expect = 2e-53
 Identities = 111/206 (53%), Positives = 145/206 (70%)
 Frame = +1

Query: 319 EQVVKVVSVLRNSSLAVNGFLESSLGKLELTVNEEFMVRVIETPLVPGESLIRFFKWAWK 498
           +++  V+S+L++S  AV G LESS   + L++NEEF+VRV+ETP VP  +LI FFKW+WK
Sbjct: 118 DKLESVLSLLQSSGDAV-GSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWK 176

Query: 499 KTEFSMTAQVVDCLIKIIGNGQRKIEIYSLWDLVKKIGKEEKXXXXXXXXXXXXXXFWRS 678
              FS+T + VD L++ +    R+ + YSLWDLVK+IG++E               F + 
Sbjct: 177 NPGFSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKL 236

Query: 679 GKGKAGLEVFNKFEEFGCEPNANSYYFTIEALYRRSIFDKAWVVCEKMLTAGKLPDDIKE 858
           GKGKAGLEVFN F E+GCEPNA+SYYFTIEAL RRSIFD A  VCEKML A  LPD  ++
Sbjct: 237 GKGKAGLEVFNAFGEYGCEPNADSYYFTIEALCRRSIFDWALSVCEKMLNASSLPDS-EK 295

Query: 859 IGNLIACFCKGNMTKEAHLVYLKAKE 936
           + N+I+ FCKG   K+A+LVYL AKE
Sbjct: 296 VWNIISWFCKGRKVKDAYLVYLLAKE 321


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  194 bits (492), Expect = 3e-47
 Identities = 104/226 (46%), Positives = 149/226 (65%), Gaps = 1/226 (0%)
 Frame = +1

Query: 262 VVGSVVKQKVFEETPERTNEQVVKVVSVLRNSSLAVNGFLESSLGKLELTVNEEFMVRVI 441
           VV    ++ V  ET E   E++  V+ +L++S    +G LES+L    L ++EEF+V+V+
Sbjct: 11  VVSLAGEENVESETYEIDVEKLENVLHLLQSSD---DGSLESTLDTFSLDLHEEFVVKVL 67

Query: 442 ETPLVPGESLIRFFKWAWKKTEFSMTAQVVDCLIKIIGNGQ-RKIEIYSLWDLVKKIGKE 618
           ETP V GE+LIRFFKWA KK + S+T + +D L+  I + + R+   Y+LWDLV++IG++
Sbjct: 68  ETPHVLGENLIRFFKWAMKKQDLSVTTRAIDVLVSSICSSELRRKNAYALWDLVREIGEK 127

Query: 619 EKXXXXXXXXXXXXXXFWRSGKGKAGLEVFNKFEEFGCEPNANSYYFTIEALYRRSIFDK 798
            +                + GKGKA LEVF+K ++FGC P++ +YY+TIEAL RRS +D 
Sbjct: 128 NEGLVSVGSLNQLIALLSKLGKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDW 187

Query: 799 AWVVCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKE 936
           AW+VCEKML  G LPD  ++IG +I  FCKG+  K+AH VYL AKE
Sbjct: 188 AWIVCEKMLDQGPLPDS-EKIGKIICWFCKGSKAKDAHKVYLLAKE 232


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  191 bits (485), Expect = 2e-46
 Identities = 98/207 (47%), Positives = 138/207 (66%), Gaps = 1/207 (0%)
 Frame = +1

Query: 319 EQVVKVVSVLRNSSLAVNGFLESSLGKLELTVNEEFMVRVIETPLVPGESLIRFFKWAWK 498
           EQ+  V+S+++++   V+G  ESSL ++ LT+NE+F+++VIETP + GE+LIRFF+WA  
Sbjct: 32  EQLESVLSLIQST---VDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAVN 88

Query: 499 K-TEFSMTAQVVDCLIKIIGNGQRKIEIYSLWDLVKKIGKEEKXXXXXXXXXXXXXXFWR 675
              EF ++  VVD L++++    R+   YSLW+L+K+IG ++               F +
Sbjct: 89  SHPEFEVSTPVVDVLVRVVCANLRQRVAYSLWELIKEIGGKQTSLLNAEILNQLIAFFSK 148

Query: 676 SGKGKAGLEVFNKFEEFGCEPNANSYYFTIEALYRRSIFDKAWVVCEKMLTAGKLPDDIK 855
            GKGKA LEV N +E  GC PNA SYYFT+EAL RRS +D AW VCEKML +G +P+   
Sbjct: 149 LGKGKAALEVLNSYEVLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPES-N 207

Query: 856 EIGNLIACFCKGNMTKEAHLVYLKAKE 936
            +G +I+ FCKGN  K AH VYL AKE
Sbjct: 208 RVGKIISLFCKGNKAKNAHSVYLLAKE 234


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  182 bits (462), Expect = 1e-43
 Identities = 104/239 (43%), Positives = 153/239 (64%)
 Frame = +1

Query: 220 NPDIMLEQNSQSNKVVGSVVKQKVFEETPERTNEQVVKVVSVLRNSSLAVNGFLESSLGK 399
           +PD+  E N+Q +  V   V   +  +  E        V+S+L++S+   +  LESSL  
Sbjct: 113 SPDLAEEANTQIHGEVEGHVDYVIDADKLEN-------VLSLLQSST---DASLESSLDN 162

Query: 400 LELTVNEEFMVRVIETPLVPGESLIRFFKWAWKKTEFSMTAQVVDCLIKIIGNGQRKIEI 579
           ++L ++E+F+V+V+ETPL+ G++LI+FF WA K+ + ++T ++V  L++ I +  RK + 
Sbjct: 163 MDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQPDINVTTRLVHPLVRAICSELRKKDA 222

Query: 580 YSLWDLVKKIGKEEKXXXXXXXXXXXXXXFWRSGKGKAGLEVFNKFEEFGCEPNANSYYF 759
           Y+LWDLVK IG+EE               F + GKGKA  EVFNKF +FGC P++ +Y++
Sbjct: 223 YALWDLVKDIGEEENTVLNVDLLNQLIALFSKLGKGKAAFEVFNKFGDFGCVPDSETYHY 282

Query: 760 TIEALYRRSIFDKAWVVCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKE 936
           TIEAL RRSIFD A  V EKML A  LP D ++IG +I  FCKG+   +A+LVYL AKE
Sbjct: 283 TIEALCRRSIFDWASSVREKMLRAEALP-DTEKIGKIICWFCKGDKANDAYLVYLLAKE 340


>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356556346|ref|XP_003546487.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 538

 Score =  175 bits (443), Expect = 2e-41
 Identities = 96/204 (47%), Positives = 130/204 (63%), Gaps = 2/204 (0%)
 Frame = +1

Query: 331 KVVSVLRNSSLAVNGFLESSLGKLELTVNEEFMVRVIETPLVPGESLIRFFKWAWKKTEF 510
           K+ SVLR    + +G LES L  ++LT++++ + ++ ETP V  E+LIRFF WAW +   
Sbjct: 91  KLESVLRLLQTSADGSLESCLDDIDLTLHQQLVTKITETPFVLSENLIRFFWWAWSERSL 150

Query: 511 SMTAQVVDCLI-KIIGNGQRKIEI-YSLWDLVKKIGKEEKXXXXXXXXXXXXXXFWRSGK 684
            +T  +V+ L+  I GN  RK E+ YSLWDLVK+IG++E               F R GK
Sbjct: 151 GVTTPMVESLVLAICGNDVRKKEVVYSLWDLVKEIGEKESGILNVKILNELISSFLRLGK 210

Query: 685 GKAGLEVFNKFEEFGCEPNANSYYFTIEALYRRSIFDKAWVVCEKMLTAGKLPDDIKEIG 864
           GKA LEVFNKFE F C P+A++YYFTIEAL RR   D A  VC+KM+ A  LPD  +++G
Sbjct: 211 GKAALEVFNKFEAFHCVPDADTYYFTIEALCRRRALDWACGVCQKMVDAQILPDG-EKVG 269

Query: 865 NLIACFCKGNMTKEAHLVYLKAKE 936
            +++  CKG   KEAH VY+ A E
Sbjct: 270 AILSWLCKGKKAKEAHGVYVVATE 293