BLASTX nr result

ID: Coptis21_contig00013945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013945
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141227.1| PREDICTED: choline transporter-like protein ...   121   8e-26
ref|XP_002528555.1| conserved hypothetical protein [Ricinus comm...   118   7e-25
ref|XP_002284857.1| PREDICTED: choline transporter-like protein ...   117   1e-24
emb|CAN73032.1| hypothetical protein VITISV_026350 [Vitis vinifera]   117   1e-24
gb|AFK44223.1| unknown [Lotus japonicus]                              117   2e-24

>ref|XP_004141227.1| PREDICTED: choline transporter-like protein 2-like [Cucumis
           sativus]
          Length = 702

 Score =  121 bits (303), Expect = 8e-26
 Identities = 64/93 (68%), Positives = 66/93 (70%)
 Frame = -2

Query: 557 SPIFPVLVCWWLGYVVATLFFAVVEMSIDTIILSFCQDSEEHQGXXXXXXXXXXXXXXXX 378
           SP+FPVLVCW LGYVVATLFF VVEMSIDTIILSFCQDS                     
Sbjct: 630 SPLFPVLVCWGLGYVVATLFFGVVEMSIDTIILSFCQDS--------------------- 668

Query: 377 XDSEEHQGTAQYAPPLLMETLTDQNELQRLTQG 279
              EEHQGTAQYAPPLLMETL DQNE+QRLTQG
Sbjct: 669 ---EEHQGTAQYAPPLLMETLNDQNEMQRLTQG 698


>ref|XP_002528555.1| conserved hypothetical protein [Ricinus communis]
           gi|223531999|gb|EEF33810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 697

 Score =  118 bits (295), Expect = 7e-25
 Identities = 62/92 (67%), Positives = 66/92 (71%)
 Frame = -2

Query: 557 SPIFPVLVCWWLGYVVATLFFAVVEMSIDTIILSFCQDSEEHQGXXXXXXXXXXXXXXXX 378
           SP+FPVLVCW LGY+VATLFFAVVEMSIDTIILSFCQDS                     
Sbjct: 630 SPLFPVLVCWVLGYIVATLFFAVVEMSIDTIILSFCQDS--------------------- 668

Query: 377 XDSEEHQGTAQYAPPLLMETLTDQNELQRLTQ 282
              EEHQGTAQYAPPLL+ETL DQNE+QRLTQ
Sbjct: 669 ---EEHQGTAQYAPPLLIETLNDQNEMQRLTQ 697


>ref|XP_002284857.1| PREDICTED: choline transporter-like protein 2 [Vitis vinifera]
           gi|302143029|emb|CBI20324.3| unnamed protein product
           [Vitis vinifera]
          Length = 697

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/92 (67%), Positives = 65/92 (70%)
 Frame = -2

Query: 557 SPIFPVLVCWWLGYVVATLFFAVVEMSIDTIILSFCQDSEEHQGXXXXXXXXXXXXXXXX 378
           SP+FPVLVCW LGYVVATLFF VVEMSIDTIILSFCQDS                     
Sbjct: 630 SPLFPVLVCWGLGYVVATLFFGVVEMSIDTIILSFCQDS--------------------- 668

Query: 377 XDSEEHQGTAQYAPPLLMETLTDQNELQRLTQ 282
              EEHQGTAQYAPPLL+ETL DQNE+QRLTQ
Sbjct: 669 ---EEHQGTAQYAPPLLIETLNDQNEMQRLTQ 697


>emb|CAN73032.1| hypothetical protein VITISV_026350 [Vitis vinifera]
          Length = 738

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/92 (67%), Positives = 65/92 (70%)
 Frame = -2

Query: 557 SPIFPVLVCWWLGYVVATLFFAVVEMSIDTIILSFCQDSEEHQGXXXXXXXXXXXXXXXX 378
           SP+FPVLVCW LGYVVATLFF VVEMSIDTIILSFCQDS                     
Sbjct: 671 SPLFPVLVCWGLGYVVATLFFGVVEMSIDTIILSFCQDS--------------------- 709

Query: 377 XDSEEHQGTAQYAPPLLMETLTDQNELQRLTQ 282
              EEHQGTAQYAPPLL+ETL DQNE+QRLTQ
Sbjct: 710 ---EEHQGTAQYAPPLLIETLNDQNEMQRLTQ 738


>gb|AFK44223.1| unknown [Lotus japonicus]
          Length = 85

 Score =  117 bits (292), Expect = 2e-24
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = -2

Query: 557 SPIFPVLVCWWLGYVVATLFFAVVEMSIDTIILSFCQDSEEHQGXXXXXXXXXXXXXXXX 378
           SP+FPV++CW LGY+VATLFFAVVEMSIDTI+LS+CQDS                     
Sbjct: 16  SPLFPVVMCWALGYIVATLFFAVVEMSIDTIVLSYCQDS--------------------- 54

Query: 377 XDSEEHQGTAQYAPPLLMETLTDQNELQRLTQG 279
              EEHQGTAQYAPPLL+ETL+DQNE+QRLTQG
Sbjct: 55  ---EEHQGTAQYAPPLLIETLSDQNEMQRLTQG 84


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