BLASTX nr result

ID: Coptis21_contig00013928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013928
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75565.1| hypothetical protein VITISV_032583 [Vitis vinifera]   203   2e-50
ref|XP_002274556.1| PREDICTED: uncharacterized protein sll0005 [...   203   3e-50
ref|XP_002533250.1| Ubiquinone biosynthesis protein coq-8, putat...   194   1e-47
ref|XP_003556229.1| PREDICTED: uncharacterized protein sll0005-l...   179   6e-43
ref|XP_003536357.1| PREDICTED: uncharacterized protein sll0005-l...   175   9e-42

>emb|CAN75565.1| hypothetical protein VITISV_032583 [Vitis vinifera]
          Length = 825

 Score =  203 bits (517), Expect = 2e-50
 Identities = 112/224 (50%), Positives = 155/224 (69%), Gaps = 5/224 (2%)
 Frame = -1

Query: 690  VVFNKRKEIQWQKLSLFLRMGVNIKGVQRFIASNFETSHENAP-----TVDSSKVANLVI 526
            VV N+RKE QWQKLSLFLR+G   KG+Q+ +A N E     +P     TVD   VANLV+
Sbjct: 605  VVLNRRKEFQWQKLSLFLRVGATRKGLQQLVAPNGEAPLNYSPGGVNGTVD---VANLVL 661

Query: 525  RLLPSKDGMVLRRVLMTADEASLVQVMVSREAIVFRKQVTIALADVLYQWMSQALGQSND 346
            RLLPSKDG+VLRR+LMTAD ASL+++M+S+EAI FR+Q+  A+ADVLYQ M + +GQ   
Sbjct: 662  RLLPSKDGVVLRRLLMTADGASLIRMMISKEAIFFRQQLCKAIADVLYQRMLEVIGQGIA 721

Query: 345  TSHLKSGVKMVSGLHHKDESPSSGISASVYDYHSVIKDRRLQLICRKVLDSARRQPLLLL 166
             +   S  ++ SG +++D S  S  SA  YDY SV++DRRL++I  K+ DS RR P+L L
Sbjct: 722  ITQHSSQWRLRSGPNNRDLSSLSRSSALTYDYQSVLRDRRLKVIFFKIFDSVRRDPVLTL 781

Query: 165  KFSWTSIVMFLSAFAFAFHKILVTWSDKCIASLSFAPRMIAFSS 34
            +F W S +MF++A A A H+ILV+ S+  +  +S   + +A S+
Sbjct: 782  RFCWASFIMFMTASALACHRILVSLSEIYLGPVSLPSKRVAISA 825


>ref|XP_002274556.1| PREDICTED: uncharacterized protein sll0005 [Vitis vinifera]
            gi|296086035|emb|CBI31476.3| unnamed protein product
            [Vitis vinifera]
          Length = 824

 Score =  203 bits (516), Expect = 3e-50
 Identities = 112/224 (50%), Positives = 156/224 (69%), Gaps = 5/224 (2%)
 Frame = -1

Query: 690  VVFNKRKEIQWQKLSLFLRMGVNIKGVQRFIASNFETSHENAP-----TVDSSKVANLVI 526
            VV N+RKE QWQKLSLFLR+G   KG+Q+ +A N E     +P     TVD   VANLV+
Sbjct: 604  VVLNRRKEFQWQKLSLFLRVGATRKGLQQLVAPNGEAPLNYSPGGVNGTVD---VANLVL 660

Query: 525  RLLPSKDGMVLRRVLMTADEASLVQVMVSREAIVFRKQVTIALADVLYQWMSQALGQSND 346
            RLLPSKDG+VLRR+LMTAD ASL+++M+S+EAI FR+Q+  A+ADVLYQ M + +GQ   
Sbjct: 661  RLLPSKDGVVLRRLLMTADGASLIRMMISKEAIFFRQQLCKAIADVLYQRMLEVIGQGIA 720

Query: 345  TSHLKSGVKMVSGLHHKDESPSSGISASVYDYHSVIKDRRLQLICRKVLDSARRQPLLLL 166
             +   S  ++ SG +++D S  S  SA  YDY SV++DRRL++I  K+L+S RR P+L L
Sbjct: 721  ITQHSSQWRLRSGPNNRDLSSLSRSSALTYDYQSVLRDRRLKVIFFKILNSVRRDPVLTL 780

Query: 165  KFSWTSIVMFLSAFAFAFHKILVTWSDKCIASLSFAPRMIAFSS 34
            +F W S +MF++A A A H+ILV+ S+  +  +S   + +A S+
Sbjct: 781  RFCWASFIMFMTASALACHRILVSLSEIYLGPVSLPSKRVAISA 824


>ref|XP_002533250.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
            gi|223526930|gb|EEF29135.1| Ubiquinone biosynthesis
            protein coq-8, putative [Ricinus communis]
          Length = 791

 Score =  194 bits (493), Expect = 1e-47
 Identities = 102/222 (45%), Positives = 153/222 (68%), Gaps = 3/222 (1%)
 Frame = -1

Query: 690  VVFNKRKEIQWQKLSLFLRMGVNIKGVQRFIASNFETSHENAPTVDSS---KVANLVIRL 520
            VV NKRKE +W +L+LFLR+G   K + R IA   E+S +      S     VA+LV+ L
Sbjct: 570  VVLNKRKEFRWDRLALFLRVGSTRKVLNRAIAPKSESSFDYLTNRSSGGVFDVAHLVLLL 629

Query: 519  LPSKDGMVLRRVLMTADEASLVQVMVSREAIVFRKQVTIALADVLYQWMSQALGQSNDTS 340
            LPS+DG+ LR++LMTAD ASLV+ +VS+EA+ FR+Q++  +AD+LYQW+ + LG  N  +
Sbjct: 630  LPSRDGIALRKLLMTADGASLVRAVVSKEAVFFRQQLSRVIADLLYQWVVKTLGIGNKAT 689

Query: 339  HLKSGVKMVSGLHHKDESPSSGISASVYDYHSVIKDRRLQLICRKVLDSARRQPLLLLKF 160
               S V++ S L +K+  PSS +S S+YDY S+ +DRRL++I  ++L+SA + P+L+LK 
Sbjct: 690  KYSSQVRLTSELDNKELGPSSNLSMSMYDYQSIFQDRRLKVIFSRILNSAMKNPVLMLKL 749

Query: 159  SWTSIVMFLSAFAFAFHKILVTWSDKCIASLSFAPRMIAFSS 34
             WTS+VM ++A A A H++LV+ S+  IA  S A + +A S+
Sbjct: 750  CWTSVVMVVAASALACHRVLVSLSEIYIAPFSLARKEVALSA 791


>ref|XP_003556229.1| PREDICTED: uncharacterized protein sll0005-like [Glycine max]
          Length = 823

 Score =  179 bits (453), Expect = 6e-43
 Identities = 98/220 (44%), Positives = 143/220 (65%), Gaps = 2/220 (0%)
 Frame = -1

Query: 690  VVFNKRKEIQWQKLSLFLRMGVNIKGVQRFIASNFETS--HENAPTVDSSKVANLVIRLL 517
            V+ N+RKE QWQ+LSLFLR+G   K + R +ASN ETS  H      D+  VA LV+RLL
Sbjct: 605  VLLNQRKEFQWQRLSLFLRVGATRKAL-RLVASNSETSLDHSTNKATDTIDVAYLVLRLL 663

Query: 516  PSKDGMVLRRVLMTADEASLVQVMVSREAIVFRKQVTIALADVLYQWMSQALGQSNDTSH 337
            PSKDG+ +RR+LMTAD ASL++ MVS+E   FR+Q+   + D+LYQWM +  GQ    + 
Sbjct: 664  PSKDGVAIRRLLMTADGASLIKAMVSKEGKFFRQQLCKIIVDLLYQWMIKLFGQGITVTQ 723

Query: 336  LKSGVKMVSGLHHKDESPSSGISASVYDYHSVIKDRRLQLICRKVLDSARRQPLLLLKFS 157
              S V + +G  +K+   S   S   YDY+S+ +DRRL++I  KVL SA R  +L+L+FS
Sbjct: 724  Y-SRVVLANGPSNKESGLSPRSSLPTYDYNSIFRDRRLRVIFSKVLKSASRDKILMLRFS 782

Query: 156  WTSIVMFLSAFAFAFHKILVTWSDKCIASLSFAPRMIAFS 37
            W S+++ ++A   A H+++V+ S+  +  +  AP+  A S
Sbjct: 783  WASLLIIITASTLACHQLVVSLSEAYLGKIFDAPKRYAVS 822


>ref|XP_003536357.1| PREDICTED: uncharacterized protein sll0005-like [Glycine max]
          Length = 825

 Score =  175 bits (443), Expect = 9e-42
 Identities = 95/221 (42%), Positives = 143/221 (64%), Gaps = 2/221 (0%)
 Frame = -1

Query: 690  VVFNKRKEIQWQKLSLFLRMGVNIKGVQRFIASNFETS--HENAPTVDSSKVANLVIRLL 517
            V+ N+RKE QWQ+LSLFLR+G   K + R +ASN ETS  H  +   D+  +A LV+RLL
Sbjct: 607  VLLNQRKEFQWQRLSLFLRVGATRKAL-RLVASNSETSLDHSTSKATDTIDIAYLVLRLL 665

Query: 516  PSKDGMVLRRVLMTADEASLVQVMVSREAIVFRKQVTIALADVLYQWMSQALGQSNDTSH 337
            PSKDG+ +RR+LMTAD ASL++ MVS+E   FR+Q+   +  +LYQWM +  GQ    + 
Sbjct: 666  PSKDGVAIRRLLMTADGASLIKAMVSKEGEFFREQLCKIIVGILYQWMIKLFGQGITITQ 725

Query: 336  LKSGVKMVSGLHHKDESPSSGISASVYDYHSVIKDRRLQLICRKVLDSARRQPLLLLKFS 157
              S + + +G   K+   S   S   YDY+S+ +DRRL++I  KVL SA R  +L+L+FS
Sbjct: 726  Y-SRMVLANGPSSKESGLSPRSSLPTYDYNSIFRDRRLRVIFSKVLKSASRDKILMLRFS 784

Query: 156  WTSIVMFLSAFAFAFHKILVTWSDKCIASLSFAPRMIAFSS 34
            W S+ + ++A   A H+++V+ S+  ++ +  AP+  A S+
Sbjct: 785  WASLKIIITASTLACHQLVVSLSEAYLSKIFDAPKRYAVSA 825


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