BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013920
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17841.3| unnamed protein product [Vitis vinifera]              255   8e-66
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   251   2e-64
ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu...   226   7e-57
ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...   224   2e-56
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]     221   2e-55

>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  255 bits (652), Expect = 8e-66
 Identities = 131/223 (58%), Positives = 160/223 (71%)
 Frame = -3

Query: 893 DGVDVNNIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNENIDSKEMEQIQDGMYVR 714
           DGV+VNN+ LVGMV ++ ER TDV F +DDGTGR+ C+RW+NE +D+KEME I DGMYVR
Sbjct: 66  DGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVR 125

Query: 713 VHGALKVFQGKIQLNTFSIRPVTNFNEIAYHFIECIYVHLYNSKLQMKGSAQTQPHATNS 534
           VHG LK FQGK  LN FSIRPVT+FNEIA HFIECIYVH+YN+K +++    TQ H TN 
Sbjct: 126 VHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQSHVTNP 185

Query: 533 AIGRNVSMGYQGAGSTGYQGAVPNQVSEQQYSCDGISGTSKMVLDYLQLPANLAGDAGVH 354
           AIG  +          GYQ + PNQ S Q  +  G+ G  ++V+DYLQ P +LA D GV 
Sbjct: 186 AIGTPLK---------GYQASQPNQFSGQYGA--GLKGVDQLVIDYLQQPQSLARDQGVG 234

Query: 353 INELAQHLKVPLQKIRESVGLLENEGVIYTTIDENHYKSALNG 225
            +ELAQ L VP+ KI ES+  LE EG+IY+TIDE HYKS  NG
Sbjct: 235 RDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277


>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  251 bits (640), Expect = 2e-64
 Identities = 132/223 (59%), Positives = 159/223 (71%)
 Frame = -3

Query: 893 DGVDVNNIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNENIDSKEMEQIQDGMYVR 714
           DGV+VNN+ LVGMV ++ ER TDV F +DDGTGR+ C+RW+NE +D+KEME I DGMYVR
Sbjct: 66  DGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMYVR 125

Query: 713 VHGALKVFQGKIQLNTFSIRPVTNFNEIAYHFIECIYVHLYNSKLQMKGSAQTQPHATNS 534
           VHG LK FQGK  LN FSIRPVT+FNEIA HFIECIYVH+YN+K +  G   TQ H TN 
Sbjct: 126 VHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRAGG--PTQSHVTNP 183

Query: 533 AIGRNVSMGYQGAGSTGYQGAVPNQVSEQQYSCDGISGTSKMVLDYLQLPANLAGDAGVH 354
           AIG  +          GYQ + PNQ S Q  +  G+ G  ++V+DYLQ P +LA D GV 
Sbjct: 184 AIGTPLK---------GYQASQPNQFSGQYGA--GLKGVDQLVIDYLQQPQSLARDQGVG 232

Query: 353 INELAQHLKVPLQKIRESVGLLENEGVIYTTIDENHYKSALNG 225
            +ELAQ L VP+ KI ES+  LE EG+IY+TIDE HYKS  NG
Sbjct: 233 RDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 275


>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
           sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
           replication protein A 32 kDa subunit A-like [Cucumis
           sativus]
          Length = 271

 Score =  226 bits (575), Expect = 7e-57
 Identities = 110/221 (49%), Positives = 162/221 (73%), Gaps = 1/221 (0%)
 Frame = -3

Query: 893 DGVDVNNIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNENIDSKEMEQIQDGMYVR 714
           +GVD+ N+ +VG VS++ ER TD++F++DDGTG + C RW+N+  D+ +ME+IQDGMYVR
Sbjct: 56  NGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVR 115

Query: 713 VHGALKVFQGKIQLNTFSIRPVTNFNEIAYHFIECIYVHLYNSKLQ-MKGSAQTQPHATN 537
           V+G LK+FQ   Q+  FS+RPVTNF+EI +HFIECI+ HL NSKLQ +KG+  TQ   ++
Sbjct: 116 VNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSD 175

Query: 536 SAIGRNVSMGYQGAGSTGYQGAVPNQVSEQQYSCDGISGTSKMVLDYLQLPANLAGDAGV 357
           S +   V  G  G  +T    A+P+    +Q++ D      ++VLDYLQLP+++A + G+
Sbjct: 176 SIVKTPVQNGSNGYHTT--SSAIPS----EQHTVDVKKSCDELVLDYLQLPSSVAKERGI 229

Query: 356 HINELAQHLKVPLQKIRESVGLLENEGVIYTTIDENHYKSA 234
           H +EL+Q LK+P++KI +S+  LE+EG+IY+TIDE H+KSA
Sbjct: 230 HKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSA 270


>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  224 bits (572), Expect = 2e-56
 Identities = 120/223 (53%), Positives = 153/223 (68%)
 Frame = -3

Query: 893 DGVDVNNIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNENIDSKEMEQIQDGMYVR 714
           DGVDV NI LVGMV D+ ER TDVSF++DDGTGR+ C RW+NE  D++EME I DG+YVR
Sbjct: 60  DGVDVTNITLVGMVFDKSERVTDVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVR 119

Query: 713 VHGALKVFQGKIQLNTFSIRPVTNFNEIAYHFIECIYVHLYNSKLQMKGSAQTQPHATNS 534
           ++G L+   G  QL  FS+RPVTNF+EIA+HFIE I++HL NSK ++   A TQP    S
Sbjct: 120 LNGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQP---LS 176

Query: 533 AIGRNVSMGYQGAGSTGYQGAVPNQVSEQQYSCDGISGTSKMVLDYLQLPANLAGDAGVH 354
           A  +  S GYQ   S         Q+S Q  S DG+ G  +MVLDYLQ P+N   + G+H
Sbjct: 177 ASVKTESTGYQTPSS---------QLSAQ--SVDGVKGLDQMVLDYLQQPSNYDREKGIH 225

Query: 353 INELAQHLKVPLQKIRESVGLLENEGVIYTTIDENHYKSALNG 225
            +EL+Q LK+  +KI ES+  LE EG+IY+TIDE HYKS  +G
Sbjct: 226 RDELSQQLKISTEKIMESIRTLEEEGLIYSTIDEFHYKSTTSG 268


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score =  221 bits (563), Expect = 2e-55
 Identities = 114/222 (51%), Positives = 150/222 (67%)
 Frame = -3

Query: 893 DGVDVNNIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNENIDSKEMEQIQDGMYVR 714
           DGVDVNN+KLVG++ ++ E  T VSF +DDGTGRL C RW+NE +D+KEME + +G+YVR
Sbjct: 87  DGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALTNGIYVR 146

Query: 713 VHGALKVFQGKIQLNTFSIRPVTNFNEIAYHFIECIYVHLYNSKLQMKGSAQTQPHATNS 534
           VHG LK FQGK QL  +S+RPV ++NEIA HF E IYVH YNS+L+ +  +        S
Sbjct: 147 VHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFMSAQVPS 206

Query: 533 AIGRNVSMGYQGAGSTGYQGAVPNQVSEQQYSCDGISGTSKMVLDYLQLPANLAGDAGVH 354
           +       GYQ + S  + G          ++ DGI G  KMVLDYLQ P+ LA + GVH
Sbjct: 207 SSFNTPLKGYQASASNQFPG----------FNMDGIGGVHKMVLDYLQQPSCLALEKGVH 256

Query: 353 INELAQHLKVPLQKIRESVGLLENEGVIYTTIDENHYKSALN 228
            NELAQ L+VP +KI  ++  LE+EG++Y+TID+ HYKS  N
Sbjct: 257 RNELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGN 298