BLASTX nr result
ID: Coptis21_contig00013917
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00013917
(1715 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271257.2| PREDICTED: uncharacterized protein LOC100243... 516 e-144
ref|XP_002527438.1| DNA binding protein, putative [Ricinus commu... 502 e-139
ref|XP_004145828.1| PREDICTED: uncharacterized protein LOC101215... 469 e-129
ref|XP_002313643.1| predicted protein [Populus trichocarpa] gi|2... 463 e-128
ref|XP_002872016.1| PHD finger family protein [Arabidopsis lyrat... 437 e-120
>ref|XP_002271257.2| PREDICTED: uncharacterized protein LOC100243147 [Vitis vinifera]
Length = 1582
Score = 516 bits (1328), Expect = e-144
Identities = 277/529 (52%), Positives = 345/529 (65%), Gaps = 5/529 (0%)
Frame = -1
Query: 1625 KRKRENLLVGKYVKKEFLGYGTFIGKVVSYNDGLYRLDYEDGDFEDLEKEEVIGILVNEN 1446
KR R N+LVG+YV KEF G G F+GK++ Y+ GLYR+DYEDGD EDLE E+ ++ +
Sbjct: 34 KRARSNVLVGQYVLKEFEGNGIFLGKIMYYDGGLYRVDYEDGDCEDLESSELCSFIMEDA 93
Query: 1445 EFDQEFKVRRNELDELVRKKFDESDSVVAVVSGNNKKTEVKLQESRVEEKNXXXXXXXXX 1266
FD + RR +LDEL+ K+ + S ++ V SGN V+ E+ +
Sbjct: 94 YFDDDLTERRKKLDELILKRKNIS-AMKLVESGNG----VERVEASLVSDLSDVPIHEVD 148
Query: 1265 XXXXXXXXXXXXXXXEFVRVRECESEAVV-IVPPPELPCSSGNIGVPEECVSYLLSVYSF 1089
E+ R RE S+A +VPPP+LP SSGNIGVPEE VS+L SVY F
Sbjct: 149 SVELDGEADSSSDSCEYARDREFGSDAETPMVPPPQLPPSSGNIGVPEEYVSHLFSVYGF 208
Query: 1088 LRSYSILLYLSPFRLDDFVGAVNCASSNALMDAVXXXXXXXXXXXLEMLSSDGAKLASKC 909
LRS+SI L+LSPF LDD VG++NC N L+DA+ LE LSS G +LASKC
Sbjct: 209 LRSFSIRLFLSPFALDDLVGSLNCTVPNTLLDAIHVALLRVVRRHLEALSSSGLELASKC 268
Query: 908 LRRLDWSLLDTLTWPVYLVEYLMVMGYAKGPEWKGFYTDVLDGDYYNLSVTKKLMIMQIL 729
L +DWSL+DTLTWPVYLV+YL +MGY KG E KGFY DVLD +YY LS +KL+I++IL
Sbjct: 269 LWCIDWSLVDTLTWPVYLVQYLTIMGYTKGLELKGFYADVLDREYYTLSAGRKLIILKIL 328
Query: 728 CDDIMESVELRTEIDMRESLEEGNDISGIEN-PSLPGPKRVHPKRSKTSVCKD---LGVI 561
CDD+++S ELR EIDMRE E G D + N P GP+RVHP+ SKTS CKD + +I
Sbjct: 329 CDDVLDSEELRAEIDMREESEIGIDPDSVTNFPPENGPRRVHPRYSKTSACKDQEAMQII 388
Query: 560 DSKSTNSKSICGPNLAFKVPXXXXXXXXXDQDGNSDECLLCGMDGTLLCCDGCPSAYHSR 381
S +L FK DQD N DEC LCGMDGTLLCCDGCPS YHSR
Sbjct: 389 AESHETKLSRNSNSLGFKT-TELDVNAADDQDVNGDECRLCGMDGTLLCCDGCPSVYHSR 447
Query: 380 CIGLSKILIPDGLWFCPECTARNIEPTLRISAGLRGAEIFGIDPYEQLFLGICDHLLVLN 201
CIG+SK+ IPDG WFCPECT I PT+ + LRGAE+FGID +EQ++LG C+HLLVL
Sbjct: 448 CIGVSKMFIPDGPWFCPECTIDKIGPTITVGTSLRGAEVFGIDAFEQVYLGTCNHLLVLK 507
Query: 200 VSIASGPSSRSYSQTDIVKVLQILSSTEQHKTLYSEICKKIMQYWEILE 54
SI + R Y Q DI+KV+Q+L S+EQ+ LYS ICK I++YWEI E
Sbjct: 508 ASIDAETCVRYYHQNDILKVIQVLYSSEQYAALYSGICKAILKYWEIKE 556
>ref|XP_002527438.1| DNA binding protein, putative [Ricinus communis]
gi|223533173|gb|EEF34930.1| DNA binding protein, putative
[Ricinus communis]
Length = 1723
Score = 502 bits (1292), Expect = e-139
Identities = 266/522 (50%), Positives = 334/522 (63%), Gaps = 7/522 (1%)
Frame = -1
Query: 1604 LVGKYVKKEFLGYGTFIGKVVSYNDGLYRLDYEDGDFEDLEKEEVIGILVNENEFDQEFK 1425
LVG+YV KEF G F+GK+VSY GLYR+DYEDGD EDLE E+ ++++++ FD E
Sbjct: 44 LVGRYVLKEFDDNGVFLGKIVSYESGLYRVDYEDGDCEDLESGELRQLILSDDYFDDELN 103
Query: 1424 VRRNELDELVRKKFDESDSVVAVVSGNNKKTEVKLQESRVEEKNXXXXXXXXXXXXXXXX 1245
RR +LD+LV +K ++ + ++K + RVE
Sbjct: 104 ERRVKLDQLVLEK--------SIKKNKKEVADLKNEVDRVETSALTDVENDGAQSEGDAD 155
Query: 1244 XXXXXXXXEFVRVRECESEAVV---IVPPPELPCSSGNIGVPEECVSYLLSVYSFLRSYS 1074
++ + E VV IVPPP+LP SS IGVP+ECVS+L SVY FLRS++
Sbjct: 156 SSSDSCEY----AQDGDLEPVVEVPIVPPPQLPPSSETIGVPKECVSHLFSVYGFLRSFN 211
Query: 1073 ILLYLSPFRLDDFVGAVNCASSNALMDAVXXXXXXXXXXXLEMLSSDGAKLASKCLRRLD 894
ILL+LSPF LDD VGA+NC N L DA+ LE LSSDG+++ASKCLR LD
Sbjct: 212 ILLFLSPFTLDDLVGAINCHVQNTLSDAIHVALMRALRRHLEALSSDGSEVASKCLRCLD 271
Query: 893 WSLLDTLTWPVYLVEYLMVMGYAKGPEWKGFYTDVLDGDYYNLSVTKKLMIMQILCDDIM 714
WSLLD+LTWPVYLV+Y VMGYAK PEWKGFY D+L +YY+L V++KLMI+QILCDD++
Sbjct: 272 WSLLDSLTWPVYLVQYFTVMGYAKRPEWKGFYDDILKREYYSLPVSRKLMILQILCDDVL 331
Query: 713 ESVELRTEIDMRESLEEGNDISGIENP-SLPGPKRVHPKRSKTSVCKD---LGVIDSKST 546
+ E+R EID RE E G D I S GP+RVHP+ SKTS CKD + +I
Sbjct: 332 DCAEIRAEIDAREESEVGMDPDAIATSLSENGPRRVHPRYSKTSACKDKEAMEIIAENQG 391
Query: 545 NSKSICGPNLAFKVPXXXXXXXXXDQDGNSDECLLCGMDGTLLCCDGCPSAYHSRCIGLS 366
S C L ++ DGNSDEC LCGMDGTLLCCDGCPSAYHSRCIG+
Sbjct: 392 TKSSCCSKYLGWE-----GDGHNVGMDGNSDECRLCGMDGTLLCCDGCPSAYHSRCIGVV 446
Query: 365 KILIPDGLWFCPECTARNIEPTLRISAGLRGAEIFGIDPYEQLFLGICDHLLVLNVSIAS 186
K+ IPDG W+CPECT + PT+ + L+GAEIFG+D YEQ+FLG C+HLLVL S ++
Sbjct: 447 KMYIPDGPWYCPECTINKLGPTIIMGTSLKGAEIFGVDLYEQVFLGTCNHLLVLRASAST 506
Query: 185 GPSSRSYSQTDIVKVLQILSSTEQHKTLYSEICKKIMQYWEI 60
P R YSQ DI KVLQ+LSS+ Q ++ Y EI K I YW I
Sbjct: 507 EPCLRYYSQKDIPKVLQVLSSSVQLRSSYLEISKAIADYWSI 548
>ref|XP_004145828.1| PREDICTED: uncharacterized protein LOC101215849 [Cucumis sativus]
gi|449510841|ref|XP_004163779.1| PREDICTED:
uncharacterized LOC101215849 [Cucumis sativus]
Length = 1719
Score = 469 bits (1206), Expect = e-129
Identities = 250/545 (45%), Positives = 335/545 (61%), Gaps = 18/545 (3%)
Frame = -1
Query: 1622 RKRENLLVGKYVKKEFLGYGTFIGKVVSYNDGLYRLDYEDGDFEDLEKEEVIGILVNENE 1443
++R L+G+Y+ KEF G G ++GKVV Y +GLYR+ YEDGD EDLE E+ G+L+ ++
Sbjct: 36 KRRPVALLGRYLLKEFNGSGKYLGKVVYYEEGLYRVVYEDGDSEDLESGEIRGLLIGDSY 95
Query: 1442 FDQEFKVRRNELDELV------------RKKFDESDSVVAVVSGNNKKTEVKLQESRVEE 1299
D R+ LD+L + D SD + V S +K + + ++ EE
Sbjct: 96 LDDGLSKRKKRLDDLADRIKAKCANGMGKNSTDTSDKLDPVASVPSKVSSEHIMQNDAEE 155
Query: 1298 KNXXXXXXXXXXXXXXXXXXXXXXXXEFVRVRECE-SEAVVIVPPPELPCSSGNIGVPEE 1122
VR R+ E + +++PPPE P SSG IG+ E+
Sbjct: 156 VEADVESSSDSLES--------------VRDRDSEFGDENLLIPPPEFPPSSGTIGIQEQ 201
Query: 1121 CVSYLLSVYSFLRSYSILLYLSPFRLDDFVGAVNCASSNALMDAVXXXXXXXXXXXLEML 942
VS+LLSVY FLRS+S+ L+L PF LDDFVG++NC +N L+D++ LE+L
Sbjct: 202 HVSHLLSVYGFLRSFSVRLFLFPFSLDDFVGSLNCGVANTLLDSIHVALMRALRRHLEVL 261
Query: 941 SSDGAKLASKCLRRLDWSLLDTLTWPVYLVEYLMVMGYAKGPEWKGFYTDVLDGDYYNLS 762
SSDG ++ASKCLR +W+LLD+LTWPVYLV+YL VMG+AKG EW GFY L +YY++
Sbjct: 262 SSDGLEIASKCLRHFNWNLLDSLTWPVYLVQYLTVMGHAKGLEWNGFYKHALGNEYYSIP 321
Query: 761 VTKKLMIMQILCDDIMESVELRTEIDMRESLEEGNDI-SGIENPSLPGPKRVHPKRSKTS 585
+KL+++QILCD+++ES ELR EID RE E G D +G S GP+RVHP+ KTS
Sbjct: 322 AGRKLLVLQILCDEVLESGELRAEIDAREISEVGLDYDAGATCLSENGPRRVHPRYPKTS 381
Query: 584 VCKDLGVIDSKSTN--SKSICGPNLAFKVPXXXXXXXXXDQDG--NSDECLLCGMDGTLL 417
CKD ++ N +KS N + D NSDEC LCGMDG+LL
Sbjct: 382 ACKDGEAMEIIVLNNGTKSYSDQNFSGLKGGSNGDLDVTAVDANRNSDECRLCGMDGSLL 441
Query: 416 CCDGCPSAYHSRCIGLSKILIPDGLWFCPECTARNIEPTLRISAGLRGAEIFGIDPYEQL 237
CCDGCPSAYH RCIG+ K+LIP G W+CPEC+ EPT+ + LRGAE+FGIDPYE +
Sbjct: 442 CCDGCPSAYHLRCIGMVKVLIPQGPWYCPECSINKSEPTITKGSALRGAEVFGIDPYEHI 501
Query: 236 FLGICDHLLVLNVSIASGPSSRSYSQTDIVKVLQILSSTEQHKTLYSEICKKIMQYWEIL 57
FLG C+HL+VL SI S P + Y++ DI+KVL +L S+ Q +Y ICK IMQYW+I
Sbjct: 502 FLGSCNHLVVLKSSINSEPCLKYYNRNDILKVLHLLCSSSQSIAIYYGICKAIMQYWDIP 561
Query: 56 EGSIV 42
E +V
Sbjct: 562 ENLLV 566
>ref|XP_002313643.1| predicted protein [Populus trichocarpa] gi|222850051|gb|EEE87598.1|
predicted protein [Populus trichocarpa]
Length = 1604
Score = 463 bits (1191), Expect = e-128
Identities = 253/526 (48%), Positives = 325/526 (61%), Gaps = 11/526 (2%)
Frame = -1
Query: 1604 LVGKYVKKEFLGYGTFIGKVVSYNDGLYRLDYEDGDFEDLEKEEVIGILVNENEFDQEFK 1425
LVG+YV KEF G F+GK+V Y+ GLYR+DYEDG EDL+ E I++ + +FD E
Sbjct: 46 LVGRYVLKEF-GSEIFLGKIVYYDTGLYRVDYEDGGCEDLKSGEFRKIILGDGDFDDELV 104
Query: 1424 VRRNELDELVRKKFDESDSVVAVVSGNNKKTEVKLQESRVEEKNXXXXXXXXXXXXXXXX 1245
+RR +LDE V +K ++K +V+ ++ V+ KN
Sbjct: 105 LRREKLDEFVLQK--------------SEKRKVEAEKEVVDSKNELGGGLTVENEGVHDE 150
Query: 1244 XXXXXXXXEFVRVR------ECESEAVVIVPPPELPCSSGNIGVPEECVSYLLSVYSFLR 1083
VR E E+ + PPP+LP SSG+I VP+E VS+L SVY+FLR
Sbjct: 151 DYADSSSDSCEHVRVGGLGMEVETP---VAPPPQLPSSSGSIRVPDEYVSHLFSVYTFLR 207
Query: 1082 SYSILLYLSPFRLDDFVGAVNCASSNALMDAVXXXXXXXXXXXLEMLSSDGAKLASKCLR 903
S++I L+LSPF LDD VGA+NC+ N L+DA+ LE LSSDG++LASKCLR
Sbjct: 208 SFNIRLFLSPFTLDDLVGAINCSIQNTLLDAIHFALMRALRRRLEALSSDGSELASKCLR 267
Query: 902 RLDWSLLDTLTWPVYLVEYLMVMGYAKGPEWKGFYTDVLDGDYYNLSVTKKLMIMQILCD 723
+DW LLD+LTWPV+LV Y +MGYA G EWKG Y + +YY+L V +KLMI+QILCD
Sbjct: 268 SVDWRLLDSLTWPVHLVHYFTIMGYANGAEWKGLYDHLWKREYYSLPVGRKLMILQILCD 327
Query: 722 DIMESVELRTEIDMRESLEEGNDISGIENPSLP--GPKRVHPKRSKTSVCKDLGVID--S 555
D ++SVELR E+D+ E E G D + LP GP RVHP+ SKTS CKD +D +
Sbjct: 328 DALDSVELRAEVDICEESEVGLD-PDVVTAILPNNGPTRVHPRCSKTSACKDRETMDIIA 386
Query: 554 KSTNSKSIC-GPNLAFKVPXXXXXXXXXDQDGNSDECLLCGMDGTLLCCDGCPSAYHSRC 378
S SK +L K D DGN DEC LCG+DG LLCCDGCPS+YHSRC
Sbjct: 387 GSQGSKPFSNSKHLGSKGTERDGNASDADVDGNGDECRLCGIDGILLCCDGCPSSYHSRC 446
Query: 377 IGLSKILIPDGLWFCPECTARNIEPTLRISAGLRGAEIFGIDPYEQLFLGICDHLLVLNV 198
IG+ K+ IP G W+CPECT + PT+ + RGAE+FGID YEQ+F+G C+HLLVL
Sbjct: 447 IGVVKMYIPKGPWYCPECTINKLGPTISMRTSHRGAEVFGIDLYEQVFMGTCNHLLVLKA 506
Query: 197 SIASGPSSRSYSQTDIVKVLQILSSTEQHKTLYSEICKKIMQYWEI 60
S P R Y+ +I KVLQ LS + QH+ LYSEICK I+Q+W I
Sbjct: 507 STGGEPCFRYYNLMEIPKVLQTLSESMQHRLLYSEICKAIVQHWNI 552
>ref|XP_002872016.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317853|gb|EFH48275.1| PHD finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1562
Score = 437 bits (1124), Expect = e-120
Identities = 240/540 (44%), Positives = 321/540 (59%), Gaps = 12/540 (2%)
Frame = -1
Query: 1604 LVGKYVKKEFLGYGTFIGKVVSYNDGLYRLDYEDGDFEDLEKEEVIGILVNENEFDQEFK 1425
L+G YV K+ F+GK+VSY GLYR+ YEDGDFEDLE + +++ ++ FD E +
Sbjct: 43 LLGCYVLKDLDDSRVFLGKIVSYKSGLYRVVYEDGDFEDLETRYLRQLIIGDSYFDDELR 102
Query: 1424 VRRNELDELVRKKFDESDSVVAVVSGNNKKTEVKLQESRVEEKNXXXXXXXXXXXXXXXX 1245
RR++LD+ + K ++ KKT+ L+ VE
Sbjct: 103 ARRSKLDDFILKNDEK------------KKTDC-LKNKGVEVPTCTSPSPVAQVESGCCS 149
Query: 1244 XXXXXXXXEFVRVRECE------SEAVV-IVPPPELPCSSGNIGVPEECVSYLLSVYSFL 1086
ECE SE + +VPP ELP SSG IG+PEE V YLLSVY F
Sbjct: 150 P-------------ECEDNIDPDSETMSPLVPPVELPSSSGTIGIPEEAVVYLLSVYGFF 196
Query: 1085 RSYSILLYLSPFRLDDFVGAVNCASSNALMDAVXXXXXXXXXXXLEMLSSDGAKLASKCL 906
RS+S+ LY+ PF LDDFVGA+N N+L+DA+ LE LSS+G+++ASKCL
Sbjct: 197 RSFSVQLYICPFGLDDFVGALNFLGPNSLLDAIHLALMRALKGHLERLSSEGSEVASKCL 256
Query: 905 RRLDWSLLDTLTWPVYLVEYLMVMGYAKGPEWKGFYTDVLDGDYYNLSVTKKLMIMQILC 726
R +DWSLLD LTWPVYLV+Y MG+A GP W+ F V++ +YY+ V KL I+QILC
Sbjct: 257 RCIDWSLLDALTWPVYLVQYFAAMGHASGPLWRVFNEFVVEKEYYSSPVVMKLKILQILC 316
Query: 725 DDIMESVELRTEIDMRESLEEGNDISGIENPSLP--GPKRVHPKRSKTSVCKDLGVIDSK 552
DD+ + ++R E+D RE E G D G+ LP GP+RVHP+ +KTS CK+ + +
Sbjct: 317 DDVFDVADIRAEMDTREESEVGFDPDGV-TAELPENGPRRVHPRFAKTSACKEKELSEFV 375
Query: 551 STN---SKSICGPNLAFKVPXXXXXXXXXDQDGNSDECLLCGMDGTLLCCDGCPSAYHSR 381
+ N S NL+ + D DGNSDEC LCGMDGTLLCCDGCP AYHSR
Sbjct: 376 AVNHGISSLNESKNLSSRYTDCGPNGDSSDLDGNSDECRLCGMDGTLLCCDGCPLAYHSR 435
Query: 380 CIGLSKILIPDGLWFCPECTARNIEPTLRISAGLRGAEIFGIDPYEQLFLGICDHLLVLN 201
CIG+ K+ IPDG W+CPECT + + PT+ LRGA FG+DP+ +LFLG C+HLLVL
Sbjct: 436 CIGVVKMYIPDGPWYCPECTIKKMGPTVAHKTSLRGAVYFGVDPHGRLFLGTCNHLLVLK 495
Query: 200 VSIASGPSSRSYSQTDIVKVLQILSSTEQHKTLYSEICKKIMQYWEILEGSIVSHPEGTE 21
+ + + + Y+ TD+ KV+ +L S H+ Y ICK I QYW+ L G ++S+ E
Sbjct: 496 IYVNADADIKYYNATDLPKVVLVLLSATNHRMEYLYICKAISQYWD-LPGDVISYLRAVE 554