BLASTX nr result
ID: Coptis21_contig00013916
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013916 (210 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Popul... 58 9e-07 ref|XP_002334197.1| nbs-lrr resistance protein [Populus trichoca... 57 1e-06 ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca... 57 2e-06 ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul... 57 2e-06 ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca... 56 3e-06 >ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222833191|gb|EEE71668.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1214 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%) Frame = -1 Query: 183 GMEMPT--TRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13 G+ +PT T+ +G ++ K++W ++ E IG+YGMGGVGKTTI+K I N+L+QR Sbjct: 302 GVPLPTSSTKPVGQAFEENTKVIWSLLMDDEVPTIGIYGMGGVGKTTILKHIHNELLQR 360 >ref|XP_002334197.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222870013|gb|EEF07144.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 938 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%) Frame = -1 Query: 183 GMEMPT--TRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13 G+ +PT T+ +G ++ K++W ++ E IG+YGMGGVGKTTIM+ I N+L+QR Sbjct: 137 GVPLPTSSTKPVGQAFEENTKVIWSLLMDDEVPTIGIYGMGGVGKTTIMQHIHNELLQR 195 >ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 829 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/57 (42%), Positives = 40/57 (70%) Frame = -1 Query: 183 GMEMPTTRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13 G + TT+L+G +D+ +M+W ++ + +G+YGMGGVGKT+++ I NQL+QR Sbjct: 86 GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQR 142 >ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa] Length = 1075 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/57 (42%), Positives = 40/57 (70%) Frame = -1 Query: 183 GMEMPTTRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13 G + TT+L+G +D+ +M+W ++ + +G+YGMGGVGKT+++ I NQL+QR Sbjct: 217 GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQR 273 >ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 1199 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%) Frame = -1 Query: 183 GMEMPTT--RLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13 G+ +PT+ +L+G ++ +K++W ++ E IG+YGMGGVGKTTI++ I N+L+QR Sbjct: 379 GVPLPTSSKKLVGRAFEENMKVMWSLLMDDEVLTIGIYGMGGVGKTTILQHIYNELLQR 437