BLASTX nr result

ID: Coptis21_contig00013916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013916
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Popul...    58   9e-07
ref|XP_002334197.1| nbs-lrr resistance protein [Populus trichoca...    57   1e-06
ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...    57   2e-06
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    57   2e-06
ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca...    56   3e-06

>ref|XP_002332782.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833191|gb|EEE71668.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1214

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = -1

Query: 183 GMEMPT--TRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13
           G+ +PT  T+ +G   ++  K++W  ++  E   IG+YGMGGVGKTTI+K I N+L+QR
Sbjct: 302 GVPLPTSSTKPVGQAFEENTKVIWSLLMDDEVPTIGIYGMGGVGKTTILKHIHNELLQR 360


>ref|XP_002334197.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870013|gb|EEF07144.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 938

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = -1

Query: 183 GMEMPT--TRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13
           G+ +PT  T+ +G   ++  K++W  ++  E   IG+YGMGGVGKTTIM+ I N+L+QR
Sbjct: 137 GVPLPTSSTKPVGQAFEENTKVIWSLLMDDEVPTIGIYGMGGVGKTTIMQHIHNELLQR 195


>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/57 (42%), Positives = 40/57 (70%)
 Frame = -1

Query: 183 GMEMPTTRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13
           G  + TT+L+G  +D+  +M+W  ++  +   +G+YGMGGVGKT+++  I NQL+QR
Sbjct: 86  GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQR 142


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/57 (42%), Positives = 40/57 (70%)
 Frame = -1

Query: 183 GMEMPTTRLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13
           G  + TT+L+G  +D+  +M+W  ++  +   +G+YGMGGVGKT+++  I NQL+QR
Sbjct: 217 GEALLTTKLVGQASDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQR 273


>ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1199

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
 Frame = -1

Query: 183 GMEMPTT--RLIGSNADKILKMVWECIVGVEFEKIGVYGMGGVGKTTIMKTISNQLVQR 13
           G+ +PT+  +L+G   ++ +K++W  ++  E   IG+YGMGGVGKTTI++ I N+L+QR
Sbjct: 379 GVPLPTSSKKLVGRAFEENMKVMWSLLMDDEVLTIGIYGMGGVGKTTILQHIYNELLQR 437


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