BLASTX nr result

ID: Coptis21_contig00013896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013896
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300130.1| glutaredoxin [Populus trichocarpa] gi|222847...   192   4e-47
ref|XP_002272852.1| PREDICTED: glutaredoxin-C1 [Vitis vinifera]       192   4e-47
ref|XP_004138799.1| PREDICTED: glutaredoxin-C1-like [Cucumis sat...   182   5e-44
ref|XP_002264542.1| PREDICTED: glutaredoxin-C1-like [Vitis vinif...   179   3e-43
emb|CAN67225.1| hypothetical protein VITISV_043905 [Vitis vinife...   179   3e-43

>ref|XP_002300130.1| glutaredoxin [Populus trichocarpa] gi|222847388|gb|EEE84935.1|
           glutaredoxin [Populus trichocarpa]
          Length = 123

 Score =  192 bits (487), Expect = 4e-47
 Identities = 95/120 (79%), Positives = 106/120 (88%)
 Frame = +3

Query: 48  AWGSYKKTISTVNEEYPPAMIQRVASESAVVVFSISSCCMCHAIKKLFCGMGVNPTVYEL 227
           +WGSY    + + +  P   I R+ASE+AVV+FSISSCCMCHAIK+LFCGMGVNPTVYEL
Sbjct: 6   SWGSYMPARTNLGD--PLERIGRLASENAVVIFSISSCCMCHAIKRLFCGMGVNPTVYEL 63

Query: 228 DEDPRGKEIEKALMSLLGASSAVPVVFVGGKLVGAMDGVMASHINGSLVPLLKEAGALWL 407
           DEDPRGKE+EKALM LLG+SSAVPVVF+GGKLVGAMD VMASHINGSLVPLLKEAGALWL
Sbjct: 64  DEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGSLVPLLKEAGALWL 123


>ref|XP_002272852.1| PREDICTED: glutaredoxin-C1 [Vitis vinifera]
          Length = 123

 Score =  192 bits (487), Expect = 4e-47
 Identities = 95/120 (79%), Positives = 107/120 (89%)
 Frame = +3

Query: 48  AWGSYKKTISTVNEEYPPAMIQRVASESAVVVFSISSCCMCHAIKKLFCGMGVNPTVYEL 227
           +WGSY  T S  +   P   I+R+ASE+AVV+FSISSCCMCHAIK+LFCGMGVNPTVYEL
Sbjct: 7   SWGSYMPTRSVGD---PLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVNPTVYEL 63

Query: 228 DEDPRGKEIEKALMSLLGASSAVPVVFVGGKLVGAMDGVMASHINGSLVPLLKEAGALWL 407
           DEDPRGKE+EKALM LLG+SSAVPVVF+GGKLVGAMD VMASHING+LVPLLK+AGALWL
Sbjct: 64  DEDPRGKEMEKALMRLLGSSSAVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDAGALWL 123


>ref|XP_004138799.1| PREDICTED: glutaredoxin-C1-like [Cucumis sativus]
          Length = 124

 Score =  182 bits (461), Expect = 5e-44
 Identities = 88/120 (73%), Positives = 106/120 (88%)
 Frame = +3

Query: 48  AWGSYKKTISTVNEEYPPAMIQRVASESAVVVFSISSCCMCHAIKKLFCGMGVNPTVYEL 227
           +WG Y   +ST + E P   I+R+A+E+AVV+FS+S+CCMCHAIK+LFCGMGVNPTVYEL
Sbjct: 8   SWGCY---MSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYEL 64

Query: 228 DEDPRGKEIEKALMSLLGASSAVPVVFVGGKLVGAMDGVMASHINGSLVPLLKEAGALWL 407
           DEDPRG ++EKALM LLG+SS VPVVF+GGKLVGAMD VMASHI+G+LVPLLK+AGALWL
Sbjct: 65  DEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 124


>ref|XP_002264542.1| PREDICTED: glutaredoxin-C1-like [Vitis vinifera]
          Length = 156

 Score =  179 bits (454), Expect = 3e-43
 Identities = 84/104 (80%), Positives = 96/104 (92%)
 Frame = +3

Query: 96  PPAMIQRVASESAVVVFSISSCCMCHAIKKLFCGMGVNPTVYELDEDPRGKEIEKALMSL 275
           P   + R+ASE+AVV+FS+SSCCMCHA+K+LFCGMGVNPTVYELD+DPRGKEIE+ALM L
Sbjct: 53  PLERVARLASENAVVIFSLSSCCMCHAVKRLFCGMGVNPTVYELDQDPRGKEIERALMRL 112

Query: 276 LGASSAVPVVFVGGKLVGAMDGVMASHINGSLVPLLKEAGALWL 407
           LG S AVPVVF+GGKLVG+MD VMASHING+LVPLLKEAGALWL
Sbjct: 113 LGNSPAVPVVFIGGKLVGSMDSVMASHINGTLVPLLKEAGALWL 156


>emb|CAN67225.1| hypothetical protein VITISV_043905 [Vitis vinifera]
           gi|296088713|emb|CBI38163.3| unnamed protein product
           [Vitis vinifera]
          Length = 107

 Score =  179 bits (454), Expect = 3e-43
 Identities = 84/104 (80%), Positives = 96/104 (92%)
 Frame = +3

Query: 96  PPAMIQRVASESAVVVFSISSCCMCHAIKKLFCGMGVNPTVYELDEDPRGKEIEKALMSL 275
           P   + R+ASE+AVV+FS+SSCCMCHA+K+LFCGMGVNPTVYELD+DPRGKEIE+ALM L
Sbjct: 4   PLERVARLASENAVVIFSLSSCCMCHAVKRLFCGMGVNPTVYELDQDPRGKEIERALMRL 63

Query: 276 LGASSAVPVVFVGGKLVGAMDGVMASHINGSLVPLLKEAGALWL 407
           LG S AVPVVF+GGKLVG+MD VMASHING+LVPLLKEAGALWL
Sbjct: 64  LGNSPAVPVVFIGGKLVGSMDSVMASHINGTLVPLLKEAGALWL 107


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