BLASTX nr result

ID: Coptis21_contig00013877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013877
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   142   2e-32
ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   142   2e-32
emb|CBI41044.3| unnamed protein product [Vitis vinifera]              142   2e-32
emb|CBI33259.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 305

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = -2

Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233
           EKLKAHF+ N RDLDLLKHDKVLSKK  P+HLR VP+YLLDPTTQEASKI+KLARAAMGN
Sbjct: 191 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 250

Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152
            N +RRQGS+R+F+++RDPL+TFSAEA
Sbjct: 251 TNPARRQGSRRKFRKSRDPLKTFSAEA 277


>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
           vinifera]
          Length = 545

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = -2

Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233
           EKLKAHF+ N RDLDLLKHDKVLSKK  P+HLR VP+YLLDPTTQEASKI+KLARAAMGN
Sbjct: 431 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 490

Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152
            N +RRQGS+R+F+++RDPL+TFSAEA
Sbjct: 491 TNPARRQGSRRKFRKSRDPLKTFSAEA 517


>emb|CBI41044.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = -2

Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233
           EKLKAHF+ N RDLDLLKHDKVLSKK  P+HLR VP+YLLDPTTQEASKI+KLARAAMGN
Sbjct: 187 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 246

Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152
            N +RRQGS+R+F+++RDPL+TFSAEA
Sbjct: 247 TNPARRQGSRRKFRKSRDPLKTFSAEA 273


>emb|CBI33259.3| unnamed protein product [Vitis vinifera]
          Length = 8206

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = -2

Query: 412  EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233
            EKLKAHF+ N RDLDLLKHDKVLSKK  P+HLR VP+YLLDPTTQEASKI+KLARAAMGN
Sbjct: 8092 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 8151

Query: 232  NNSSRRQGSKRRFKQTRDPLRTFSAEA 152
             N +RRQGS+R+F+++RDPL+TFSAEA
Sbjct: 8152 TNPARRQGSRRKFRKSRDPLKTFSAEA 8178


>ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|222853160|gb|EEE90707.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = -2

Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233
           EKLKAHF+ NPRDLDLLKHDKVLSKK P  HL  VP+YLLD TT+EASK++KLARAAMGN
Sbjct: 483 EKLKAHFEVNPRDLDLLKHDKVLSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGN 542

Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAE 155
           NNS RRQG KR F++++DPL++FSAE
Sbjct: 543 NNSGRRQGPKRNFRKSKDPLKSFSAE 568


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