BLASTX nr result
ID: Coptis21_contig00013877
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013877 (413 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 142 2e-32 ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 142 2e-32 emb|CBI41044.3| unnamed protein product [Vitis vinifera] 142 2e-32 emb|CBI33259.3| unnamed protein product [Vitis vinifera] 142 2e-32 ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30 >ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial [Vitis vinifera] Length = 305 Score = 142 bits (359), Expect = 2e-32 Identities = 69/87 (79%), Positives = 80/87 (91%) Frame = -2 Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233 EKLKAHF+ N RDLDLLKHDKVLSKK P+HLR VP+YLLDPTTQEASKI+KLARAAMGN Sbjct: 191 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 250 Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152 N +RRQGS+R+F+++RDPL+TFSAEA Sbjct: 251 TNPARRQGSRRKFRKSRDPLKTFSAEA 277 >ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis vinifera] Length = 545 Score = 142 bits (359), Expect = 2e-32 Identities = 69/87 (79%), Positives = 80/87 (91%) Frame = -2 Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233 EKLKAHF+ N RDLDLLKHDKVLSKK P+HLR VP+YLLDPTTQEASKI+KLARAAMGN Sbjct: 431 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 490 Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152 N +RRQGS+R+F+++RDPL+TFSAEA Sbjct: 491 TNPARRQGSRRKFRKSRDPLKTFSAEA 517 >emb|CBI41044.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 142 bits (359), Expect = 2e-32 Identities = 69/87 (79%), Positives = 80/87 (91%) Frame = -2 Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233 EKLKAHF+ N RDLDLLKHDKVLSKK P+HLR VP+YLLDPTTQEASKI+KLARAAMGN Sbjct: 187 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 246 Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152 N +RRQGS+R+F+++RDPL+TFSAEA Sbjct: 247 TNPARRQGSRRKFRKSRDPLKTFSAEA 273 >emb|CBI33259.3| unnamed protein product [Vitis vinifera] Length = 8206 Score = 142 bits (359), Expect = 2e-32 Identities = 69/87 (79%), Positives = 80/87 (91%) Frame = -2 Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233 EKLKAHF+ N RDLDLLKHDKVLSKK P+HLR VP+YLLDPTTQEASKI+KLARAAMGN Sbjct: 8092 EKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLARAAMGN 8151 Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAEA 152 N +RRQGS+R+F+++RDPL+TFSAEA Sbjct: 8152 TNPARRQGSRRKFRKSRDPLKTFSAEA 8178 >ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|222853160|gb|EEE90707.1| predicted protein [Populus trichocarpa] Length = 597 Score = 135 bits (341), Expect = 3e-30 Identities = 65/86 (75%), Positives = 76/86 (88%) Frame = -2 Query: 412 EKLKAHFQDNPRDLDLLKHDKVLSKKAPPSHLRAVPEYLLDPTTQEASKILKLARAAMGN 233 EKLKAHF+ NPRDLDLLKHDKVLSKK P HL VP+YLLD TT+EASK++KLARAAMGN Sbjct: 483 EKLKAHFEVNPRDLDLLKHDKVLSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGN 542 Query: 232 NNSSRRQGSKRRFKQTRDPLRTFSAE 155 NNS RRQG KR F++++DPL++FSAE Sbjct: 543 NNSGRRQGPKRNFRKSKDPLKSFSAE 568