BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013876
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   147   7e-34
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = -2

Query: 444 IEHYGCMINLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVALVEVVINQLI 265
           +EHYGCM++LLGR G LKEAF LV SMP+EPNAI+WGTLL ACR+H+   L E V ++L+
Sbjct: 363 VEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLV 422

Query: 264 KLEASDANAYAILSNVYAAAVNADDFTQVRLQTKGTSTQKQHGASSVEVDDSFLNLHAY- 88
           K E SD+   ++LSN+YAAA + D+F  +RL+ K TS QK  G SS+EVDD       + 
Sbjct: 423 KSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFD 482

Query: 87  RSHSQTSRMYKVID 46
           RSH ++ R+YK ID
Sbjct: 483 RSHPKSDRIYKTID 496


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = -2

Query: 444 IEHYGCMINLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVALVEVVINQLI 265
           +EHYGCM++LLGR G LKEAF LV SMP+EPNAI+WGTLL ACR+H+   L E V ++L+
Sbjct: 448 VEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLV 507

Query: 264 KLEASDANAYAILSNVYAAAVNADDFTQVRLQTKGTSTQKQHGASSVEVDDSFLNLHAY- 88
           K E SD+   ++LSN+YAAA + D+F  +RL+ K TS QK  G SS+EVDD       + 
Sbjct: 508 KSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFD 567

Query: 87  RSHSQTSRMYKVID 46
           RSH ++ R+YK ID
Sbjct: 568 RSHPKSDRIYKTID 581


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
 Frame = -2

Query: 444 IEHYGCMINLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVALVEVVINQLI 265
           IEHYGCMI+LLGR G L+EAF LV+SMPMEPN ++WGTLL ACRVHN V L E V+++LI
Sbjct: 454 IEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLI 513

Query: 264 KLEASDANAYAILSNVYAAAVNADDFTQVRLQTKGTSTQKQHGASSVEVDDSFLNLHAY- 88
            LE SD   Y++LSN++AAA + +    +RLQ K T  QK  GASS+E+DD       + 
Sbjct: 514 TLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFD 573

Query: 87  RSHSQTSRMYKVI 49
           +SH +T ++Y+++
Sbjct: 574 KSHPETDKIYQIL 586


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/135 (53%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
 Frame = -2

Query: 444 IEHYGCMINLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVALVEVVINQLI 265
           +EHYGCM++LLGR G+LKEAF L++SMPMEPNAI+ GTLL ACR+HNDV L   V  QL 
Sbjct: 454 VEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLF 513

Query: 264 KLEASDANAYAILSNVYAAAVNADDFTQVRLQTKGTSTQKQHGASSVEVDDSFLNLHAY- 88
           KLE SD   Y++LSN+YA A +  +   VRLQ K T  +K  GASS+EV++       + 
Sbjct: 514 KLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFD 573

Query: 87  RSHSQTSRMYKVIDR 43
           +SH ++  +Y++IDR
Sbjct: 574 QSHPKSDDIYQMIDR 588


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/135 (51%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
 Frame = -2

Query: 444 IEHYGCMINLLGRQGYLKEAFELVKSMPMEPNAIVWGTLLEACRVHNDVALVEVVINQLI 265
           IEHYGCM++LLGR G LKEA+ LV+SMP+EPN ++WGTLL ACR+HN V L E V++ L 
Sbjct: 277 IEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLF 336

Query: 264 KLEASDANAYAILSNVYAAAVNADDFTQVRLQTKGTSTQKQHGASSVEVDDSFLNLHAY- 88
           KLE SD   Y++LSN++A+A +      VRLQ K    QK  GASS+EVDD       + 
Sbjct: 337 KLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFD 396

Query: 87  RSHSQTSRMYKVIDR 43
           +SH ++ ++Y++I+R
Sbjct: 397 KSHPKSDKIYQMINR 411