BLASTX nr result

ID: Coptis21_contig00013872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013872
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion chann...   477   e-132
ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion chann...   477   e-132
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   474   e-131
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   472   e-131
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   469   e-130

>ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
            sativus]
          Length = 663

 Score =  477 bits (1227), Expect = e-132
 Identities = 232/300 (77%), Positives = 251/300 (83%)
 Frame = +3

Query: 3    FNIIILTSGLILVTMLIGNIKVFLHATTSKKQAMHIKLRNIEWWMXXXXXXXXXXXXXXL 182
            FNII+LTSGL+LVTMLIGNIKVFLHATTSKKQ M +K+RN+EWWM               
Sbjct: 364  FNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNLEWWMRKRRLPQGFRQRVRN 423

Query: 183  YERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQVPLFQHMDELVLENICDRVK 362
            YERQ+WAAMRGVDECE+IKNLPEGLRR+IKYHLCLDLV+QVPLFQHMD+LVLENICDRVK
Sbjct: 424  YERQRWAAMRGVDECEMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVK 483

Query: 363  SLIYPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTSCCMLGPGNFSGDELLSWCLR 542
            SLI+ KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ SCCMLGPGNFSGDELLSWCLR
Sbjct: 484  SLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLR 543

Query: 543  RPFVERXXXXXXXXXXXXXXXAFELDAQDVKYVTQNFRYTFVNEKVKRSARYYSPGWRTW 722
            RPF+ER               AF L+A+DVKYVTQ+FRYTFVN+KVKRSARYYSPGWRTW
Sbjct: 544  RPFIERLPPSSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTW 603

Query: 723  AAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPDHDEFSF 902
            AAVAIQLAWRRY+HRLTLTSLSFI            GEDRLRLYTALLTSPKP+HD F F
Sbjct: 604  AAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 663


>ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
            sativus]
          Length = 659

 Score =  477 bits (1227), Expect = e-132
 Identities = 232/300 (77%), Positives = 251/300 (83%)
 Frame = +3

Query: 3    FNIIILTSGLILVTMLIGNIKVFLHATTSKKQAMHIKLRNIEWWMXXXXXXXXXXXXXXL 182
            FNII+LTSGL+LVTMLIGNIKVFLHATTSKKQ M +K+RN+EWWM               
Sbjct: 360  FNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNLEWWMRKRRLPQGFRQRVRN 419

Query: 183  YERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQVPLFQHMDELVLENICDRVK 362
            YERQ+WAAMRGVDECE+IKNLPEGLRR+IKYHLCLDLV+QVPLFQHMD+LVLENICDRVK
Sbjct: 420  YERQRWAAMRGVDECEMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVK 479

Query: 363  SLIYPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTSCCMLGPGNFSGDELLSWCLR 542
            SLI+ KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ SCCMLGPGNFSGDELLSWCLR
Sbjct: 480  SLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLR 539

Query: 543  RPFVERXXXXXXXXXXXXXXXAFELDAQDVKYVTQNFRYTFVNEKVKRSARYYSPGWRTW 722
            RPF+ER               AF L+A+DVKYVTQ+FRYTFVN+KVKRSARYYSPGWRTW
Sbjct: 540  RPFIERLPPSSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTW 599

Query: 723  AAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPDHDEFSF 902
            AAVAIQLAWRRY+HRLTLTSLSFI            GEDRLRLYTALLTSPKP+HD F F
Sbjct: 600  AAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 659


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
            gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
            channel, putative [Ricinus communis]
          Length = 687

 Score =  474 bits (1221), Expect = e-131
 Identities = 232/300 (77%), Positives = 252/300 (84%)
 Frame = +3

Query: 3    FNIIILTSGLILVTMLIGNIKVFLHATTSKKQAMHIKLRNIEWWMXXXXXXXXXXXXXXL 182
            FNII+LTSGL+LVTMLIGNIKVFLHATTSKKQAM +K+RNIEWWM               
Sbjct: 388  FNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPPEFRHRVRN 447

Query: 183  YERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQVPLFQHMDELVLENICDRVK 362
            YERQ+WAAMRGVDECE+I+NLPEGLRR+IKYHLCLDLV+QVPLFQHMD+LVLENICDRVK
Sbjct: 448  YERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVK 507

Query: 363  SLIYPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTSCCMLGPGNFSGDELLSWCLR 542
            SLI+ KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ SCCMLGPGNFSGDELLSWCLR
Sbjct: 508  SLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLR 567

Query: 543  RPFVERXXXXXXXXXXXXXXXAFELDAQDVKYVTQNFRYTFVNEKVKRSARYYSPGWRTW 722
            RPF+ER               AF L+A+DVKYVTQ+FRYTFVNE+VKRSARYYSPGWRTW
Sbjct: 568  RPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNERVKRSARYYSPGWRTW 627

Query: 723  AAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPDHDEFSF 902
            AAVAIQLAWRRYKHRLTLTSLSFI            GEDRLRLYTALLTSPKP+ ++F F
Sbjct: 628  AAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQEDFDF 687


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
            predicted protein [Populus trichocarpa]
          Length = 635

 Score =  472 bits (1215), Expect = e-131
 Identities = 231/300 (77%), Positives = 251/300 (83%)
 Frame = +3

Query: 3    FNIIILTSGLILVTMLIGNIKVFLHATTSKKQAMHIKLRNIEWWMXXXXXXXXXXXXXXL 182
            FNII+LTSGL+LVTMLIGNIKVFLHATTSKKQAM +K+RNIEWWM               
Sbjct: 336  FNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRHLPTGFRQRVRN 395

Query: 183  YERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQVPLFQHMDELVLENICDRVK 362
            YERQ+WAAMRGVDECE+I+NLPEGLRR+IKYHLCLDLV+QVPLFQHMD+LVLENICDRVK
Sbjct: 396  YERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVK 455

Query: 363  SLIYPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTSCCMLGPGNFSGDELLSWCLR 542
            SLI+ KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ SCCMLGPGNFSGDELLSWCLR
Sbjct: 456  SLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLR 515

Query: 543  RPFVERXXXXXXXXXXXXXXXAFELDAQDVKYVTQNFRYTFVNEKVKRSARYYSPGWRTW 722
            RPF+ER               AF L+A+DVKYVTQ+FRYTFV E+VKRSARYYSPGWRTW
Sbjct: 516  RPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKERVKRSARYYSPGWRTW 575

Query: 723  AAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPDHDEFSF 902
            AAVAIQLAWRRYKHRLTLTSLSFI            GEDRLRLYTALLTSPKP+ ++F F
Sbjct: 576  AAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQEDFDF 635


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
            vinifera]
          Length = 667

 Score =  469 bits (1206), Expect = e-130
 Identities = 230/300 (76%), Positives = 247/300 (82%)
 Frame = +3

Query: 3    FNIIILTSGLILVTMLIGNIKVFLHATTSKKQAMHIKLRNIEWWMXXXXXXXXXXXXXXL 182
            FNII+LTSGLILVTMLIGNIKVFLHATTSKKQ M +K+RNIEWWM               
Sbjct: 368  FNIIVLTSGLILVTMLIGNIKVFLHATTSKKQTMQLKMRNIEWWMRRRKLPLGFRQRVRN 427

Query: 183  YERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQVPLFQHMDELVLENICDRVK 362
            YERQKWAAMRGVDEC++ KNLPEGLRR+IKYHLCLDLV+QVPLFQHMD+LVLENICDRVK
Sbjct: 428  YERQKWAAMRGVDECQMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVK 487

Query: 363  SLIYPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTSCCMLGPGNFSGDELLSWCLR 542
            SLI+ KGE ITREGDPVQRMLFVVRGHLQSSQVLRDG+ SCCMLGPGNFSGDELLSWCLR
Sbjct: 488  SLIFTKGEVITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLR 547

Query: 543  RPFVERXXXXXXXXXXXXXXXAFELDAQDVKYVTQNFRYTFVNEKVKRSARYYSPGWRTW 722
            RPF+ER               AF L+A DVKYVTQ+FRYTFV E+VKRSARYYSPGWRTW
Sbjct: 548  RPFIERLPPSSSTLITLETTEAFGLEADDVKYVTQHFRYTFVKERVKRSARYYSPGWRTW 607

Query: 723  AAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXXGEDRLRLYTALLTSPKPDHDEFSF 902
            AAVAIQLAWRRYKHRLTLTSLSFI            GEDRLRLYTA+LTSPKP+ D+F F
Sbjct: 608  AAVAIQLAWRRYKHRLTLTSLSFIRPRRPVSRCSSLGEDRLRLYTAMLTSPKPNQDDFDF 667


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