BLASTX nr result

ID: Coptis21_contig00013856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013856
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16932.3| unnamed protein product [Vitis vinifera]               51   9e-08
ref|XP_002281555.1| PREDICTED: uncharacterized protein ywbO [Vit...    51   9e-08
ref|XP_004154726.1| PREDICTED: uncharacterized protein YwbO-like...    47   1e-06
ref|XP_004137140.1| PREDICTED: uncharacterized protein YwbO-like...    47   1e-06
gb|AFK33670.1| unknown [Lotus japonicus]                               47   3e-06

>emb|CBI16932.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score = 50.8 bits (120), Expect(2) = 9e-08
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = +3

Query: 705 LRWHPYFQNPSTPKAGVVKKVLYWGNFGPQSERTKAQMGVPWSWLG 842
           LRWHP+F NPS PK G+ K   Y   FGP+SE+  A+M   +  LG
Sbjct: 82  LRWHPFFLNPSAPKEGINKIEFYKNKFGPRSEQIAARMTEVFRGLG 127



 Score = 32.3 bits (72), Expect(2) = 9e-08
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 619 IQPDTICPWYCVGKMNHDKTI 681
           I  DT+CPW  VGK N DK I
Sbjct: 51  ISSDTVCPWCFVGKRNLDKAI 71


>ref|XP_002281555.1| PREDICTED: uncharacterized protein ywbO [Vitis vinifera]
          Length = 217

 Score = 50.8 bits (120), Expect(2) = 9e-08
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = +3

Query: 705 LRWHPYFQNPSTPKAGVVKKVLYWGNFGPQSERTKAQMGVPWSWLG 842
           LRWHP+F NPS PK G+ K   Y   FGP+SE+  A+M   +  LG
Sbjct: 49  LRWHPFFLNPSAPKEGINKIEFYKNKFGPRSEQIAARMTEVFRGLG 94



 Score = 32.3 bits (72), Expect(2) = 9e-08
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 619 IQPDTICPWYCVGKMNHDKTI 681
           I  DT+CPW  VGK N DK I
Sbjct: 18  ISSDTVCPWCFVGKRNLDKAI 38


>ref|XP_004154726.1| PREDICTED: uncharacterized protein YwbO-like [Cucumis sativus]
          Length = 259

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +3

Query: 705 LRWHPYFQNPSTPKAGVVKKVLYWGNFGPQSERTKAQMGVPWSWLG 842
           L WHP+  NP+ PK GVVK   Y   FG QSE+ +A+M   +  LG
Sbjct: 91  LNWHPFQLNPTAPKEGVVKTEYYRSKFGIQSEQMEARMAEVFRGLG 136



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 619 IQPDTICPWYCVGKMNHDKTI 681
           I  DT+CPW  VGK N DK I
Sbjct: 60  ISSDTVCPWCFVGKKNLDKAI 80


>ref|XP_004137140.1| PREDICTED: uncharacterized protein YwbO-like [Cucumis sativus]
          Length = 218

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +3

Query: 705 LRWHPYFQNPSTPKAGVVKKVLYWGNFGPQSERTKAQMGVPWSWLG 842
           L WHP+  NP+ PK GVVK   Y   FG QSE+ +A+M   +  LG
Sbjct: 50  LNWHPFQLNPTAPKEGVVKTEYYRSKFGIQSEQMEARMAEVFRGLG 95



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 619 IQPDTICPWYCVGKMNHDKTI 681
           I  DT+CPW  VGK N DK I
Sbjct: 19  ISSDTVCPWCFVGKKNLDKAI 39


>gb|AFK33670.1| unknown [Lotus japonicus]
          Length = 210

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +3

Query: 696 NLILRWHPYFQNPSTPKAGVVKKVLYWGNFGPQSERTKAQM 818
           N  ++WHP+   P  PK GV K+  Y   FGPQSER +A+M
Sbjct: 39  NFEIKWHPFQLQPDAPKEGVDKREYYRKKFGPQSERMEARM 79



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 619 IQPDTICPWYCVGKMNHDKTI 681
           I  DT+CPW   GK N DK I
Sbjct: 11  ISSDTVCPWCFAGKKNLDKAI 31


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