BLASTX nr result

ID: Coptis21_contig00013852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013852
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1...   140   1e-31
emb|CBI23031.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycin...   129   2e-28
ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1...   127   9e-28
ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1...   127   9e-28

>ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis
           vinifera]
          Length = 192

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/88 (79%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
 Frame = +1

Query: 13  MKGGRKNLKRAAEE-AYTFQEGQCVMQVVSLRGTNLIEVMDDKGEKSLAIFPAKFQKSMW 189
           MKGGRKNLKRAAEE   T QEGQ +MQVVSLRGTNLIEVMD +GE SLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 190 IKRGSFVVIDERGRDMALESGSKVTCMV 273
           IK+GSFVV+DE GR+ A+ESGSKV C+V
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIV 88


>emb|CBI23031.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/88 (79%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
 Frame = +1

Query: 13  MKGGRKNLKRAAEE-AYTFQEGQCVMQVVSLRGTNLIEVMDDKGEKSLAIFPAKFQKSMW 189
           MKGGRKNLKRAAEE   T QEGQ +MQVVSLRGTNLIEVMD +GE SLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 190 IKRGSFVVIDERGRDMALESGSKVTCMV 273
           IK+GSFVV+DE GR+ A+ESGSKV C+V
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIV 88


>ref|NP_001237534.1| uncharacterized protein LOC100306612 [Glycine max]
           gi|255629065|gb|ACU14877.1| unknown [Glycine max]
          Length = 171

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
 Frame = +1

Query: 13  MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGTNLIEVMDDKGEKSLAIFPAKFQKSMW 189
           M+GGRKNLKRA EE + T Q+GQ +MQVVSLRG N+IEVMD  G K LA+FPAK QKSMW
Sbjct: 3   MRGGRKNLKRATEEKHITLQDGQGIMQVVSLRGANIIEVMDASGNKLLALFPAKIQKSMW 62

Query: 190 IKRGSFVVIDERGRDMALESGSKVTCMV 273
           IKRGSFVV+DE G++ ALESGSKV C+V
Sbjct: 63  IKRGSFVVVDESGKEKALESGSKVACLV 90


>ref|XP_004158969.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +1

Query: 13  MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGTNLIEVMDDKGEKSLAIFPAKFQKSMW 189
           MKGGRKNL+RA+E    + ++G  +MQVVS+RG+NLIEVMD +GEKSLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 190 IKRGSFVVIDERGRDMALESGSKVTCMV 273
           IKRGSFVV+DE G+  ALESGSKV C+V
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIV 88


>ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +1

Query: 13  MKGGRKNLKRAAEEAY-TFQEGQCVMQVVSLRGTNLIEVMDDKGEKSLAIFPAKFQKSMW 189
           MKGGRKNL+RA+E    + ++G  +MQVVS+RG+NLIEVMD +GEKSLA+FPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 190 IKRGSFVVIDERGRDMALESGSKVTCMV 273
           IKRGSFVV+DE G+  ALESGSKV C+V
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIV 88


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