BLASTX nr result

ID: Coptis21_contig00013847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013847
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26736.1| unknown [Picea sitchensis]                             154   5e-35
emb|CBI29896.3| unnamed protein product [Vitis vinifera]              144   3e-32
ref|NP_187825.1| protein cornichon-1 [Arabidopsis thaliana] gi|7...   144   4e-32
ref|XP_002282874.1| PREDICTED: protein cornichon homolog 1-like ...   143   6e-32
ref|XP_002882769.1| cornichon family protein [Arabidopsis lyrata...   143   8e-32

>gb|ABK26736.1| unknown [Picea sitchensis]
          Length = 149

 Score =  154 bits (388), Expect = 5e-35
 Identities = 69/133 (51%), Positives = 97/133 (72%)
 Frame = -1

Query: 892 MAWELTIWICNFLFVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 713
           MAWE+ +W+ +F+FVIALL    +Q ICL+DLE D  NPYD+ S +N  VIPEF+IQG L
Sbjct: 1   MAWEVLLWLLSFIFVIALLGFVVYQLICLSDLEFDYINPYDSTSRINRLVIPEFMIQGVL 60

Query: 712 CVVFLLMGHWVLLLLSAPLTLYHIRRYRGRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 533
           C++FLL G W + L++APL  YH + Y  RKHL+DVTEIF  LN +K+ R++K  +Y +L
Sbjct: 61  CLLFLLTGCWFMCLITAPLVYYHAQLYVRRKHLVDVTEIFNLLNAEKKYRMIKLVYYLIL 120

Query: 532 FFNCLIRIIHAAV 494
           FF  + R++ ++V
Sbjct: 121 FFIVIYRLVSSSV 133


>emb|CBI29896.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  144 bits (364), Expect = 3e-32
 Identities = 64/131 (48%), Positives = 94/131 (71%)
 Frame = -1

Query: 892 MAWELTIWICNFLFVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 713
           M+WEL +WI  F   IALL  T +Q +CL+DLE+D  NPY+++S +N+ V+P+F++QG L
Sbjct: 1   MSWELILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVL 60

Query: 712 CVVFLLMGHWVLLLLSAPLTLYHIRRYRGRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 533
           C++FLL  HW L L+S P+T Y+   +  R+HLIDVTE+FR+L+ +K+ R+ K  FY  L
Sbjct: 61  CILFLLTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFL 120

Query: 532 FFNCLIRIIHA 500
           F   +IRI+ A
Sbjct: 121 FIIVIIRILAA 131


>ref|NP_187825.1| protein cornichon-1 [Arabidopsis thaliana]
           gi|75169292|sp|Q9C7D7.1|CNIH1_ARATH RecName:
           Full=Protein cornichon homolog 1
           gi|12322050|gb|AAG51073.1|AC069472_13 unknown protein;
           8145-9251 [Arabidopsis thaliana]
           gi|30017219|gb|AAP12843.1| At3g12180 [Arabidopsis
           thaliana] gi|110735780|dbj|BAE99867.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332641641|gb|AEE75162.1| protein cornichon-1
           [Arabidopsis thaliana]
          Length = 146

 Score =  144 bits (363), Expect = 4e-32
 Identities = 63/133 (47%), Positives = 95/133 (71%)
 Frame = -1

Query: 892 MAWELTIWICNFLFVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 713
           MAW+L +WI +F   +AL+    +Q ICLTDLE+D  NP++T++ +N  VIPEF++QG+L
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 712 CVVFLLMGHWVLLLLSAPLTLYHIRRYRGRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 533
           C++FLL  HWV  L++ P+T+YH   Y+ R++LIDVTE+FR ++ +K+ R  K GFY  L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 532 FFNCLIRIIHAAV 494
           F   + R+  +AV
Sbjct: 121 FIMVVFRLTLSAV 133


>ref|XP_002282874.1| PREDICTED: protein cornichon homolog 1-like [Vitis vinifera]
          Length = 146

 Score =  143 bits (361), Expect = 6e-32
 Identities = 62/129 (48%), Positives = 93/129 (72%)
 Frame = -1

Query: 892 MAWELTIWICNFLFVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 713
           M+WEL +WI  F   IALL  T +Q +CL+DLE+D  NPY+++S +N+ V+P+F++QG L
Sbjct: 1   MSWELILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVL 60

Query: 712 CVVFLLMGHWVLLLLSAPLTLYHIRRYRGRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 533
           C++FLL  HW L L+S P+T Y+   +  R+HLIDVTE+FR+L+ +K+ R+ K  FY  L
Sbjct: 61  CILFLLTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFL 120

Query: 532 FFNCLIRII 506
           F   +IR++
Sbjct: 121 FIIVIIRLV 129


>ref|XP_002882769.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328609|gb|EFH59028.1| cornichon family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 146

 Score =  143 bits (360), Expect = 8e-32
 Identities = 63/133 (47%), Positives = 94/133 (70%)
 Frame = -1

Query: 892 MAWELTIWICNFLFVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 713
           MAW+L +WI +F   +AL+    +Q ICLTDLE+D  NP++T++ +N  VIPEFV+QG+L
Sbjct: 1   MAWDLFLWIISFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFVLQGSL 60

Query: 712 CVVFLLMGHWVLLLLSAPLTLYHIRRYRGRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 533
           C++FLL  HWV  L++ P+T+YH   +  R++LIDVTE+FR ++ +K+ R  K GFY  L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLFNERRYLIDVTEVFRGISFEKKFRFTKLGFYVFL 120

Query: 532 FFNCLIRIIHAAV 494
           F   + R+  +AV
Sbjct: 121 FIMVVFRLTLSAV 133


Top