BLASTX nr result

ID: Coptis21_contig00013839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013839
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC32109.1| ABC transporter family protein [Camellia sinensis]      90   2e-16
ref|XP_002306861.1| ABC transporter family protein [Populus tric...    89   4e-16
ref|XP_003570349.1| PREDICTED: ABC transporter I family member 1...    89   5e-16
ref|XP_002302037.1| ABC transporter family protein [Populus tric...    88   1e-15
ref|XP_002276857.1| PREDICTED: ABC transporter I family member 1...    87   2e-15

>gb|AEC32109.1| ABC transporter family protein [Camellia sinensis]
          Length = 287

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +1

Query: 7   GELRRSQKLVELPELKNASNLLSVVESWLRSETKREKKLVAASP-QFKKASAFDNSPFRS 183
           GEL+R+ KL EL ELKN++NLLSVVESWLRSET  EKK     P + +K S FD+SPFRS
Sbjct: 220 GELKRTDKLSELGELKNSANLLSVVESWLRSETNTEKKKPTNPPVENQKTSPFDSSPFRS 279

Query: 184 SRHMAYYR 207
           SRHMAYYR
Sbjct: 280 SRHMAYYR 287


>ref|XP_002306861.1| ABC transporter family protein [Populus trichocarpa]
           gi|222856310|gb|EEE93857.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 274

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QDGELRRSQKLVELPELKNASNLLSVVESWLRSETKREKKLVAASP-QFKKASAFDNSPF 177
           QDGEL+R +KL E+ ELKN++ LLSVVESWLRSETK EKK     P Q +K S F +SPF
Sbjct: 205 QDGELKRVKKLTEVHELKNSATLLSVVESWLRSETKNEKKKPTNPPAQNQKTSPFGSSPF 264

Query: 178 RSSRHMAYYR 207
            SSRHMAYYR
Sbjct: 265 MSSRHMAYYR 274


>ref|XP_003570349.1| PREDICTED: ABC transporter I family member 19-like [Brachypodium
           distachyon]
          Length = 294

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QDGELRRSQKLVELPELKNASNLLSVVESWLRSETKREKK-LVAASPQFKKASAFDNSPF 177
           Q+GELR+S K  ++ ELKNA NLLSVVESWL+SETK  KK  + A  Q +++S FD SPF
Sbjct: 225 QEGELRKSAKYSDIEELKNAKNLLSVVESWLKSETKLPKKEPIRAESQPRRSSPFDASPF 284

Query: 178 RSSRHMAYYR 207
           RSSRHMAYYR
Sbjct: 285 RSSRHMAYYR 294


>ref|XP_002302037.1| ABC transporter family protein [Populus trichocarpa]
           gi|222843763|gb|EEE81310.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 274

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QDGELRRSQKLVELPELKNASNLLSVVESWLRSETKREKKLVAASP-QFKKASAFDNSPF 177
           QDGELRR++KL E+ ELK+++NLLSVVESWLR ETK EKK     P Q +K S   +SPF
Sbjct: 205 QDGELRRAEKLTEVHELKSSANLLSVVESWLRHETKSEKKKPTNPPAQNQKTSPLGSSPF 264

Query: 178 RSSRHMAYYR 207
            SSRHMAYYR
Sbjct: 265 MSSRHMAYYR 274


>ref|XP_002276857.1| PREDICTED: ABC transporter I family member 19 [Vitis vinifera]
           gi|297744168|emb|CBI37138.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/71 (66%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   QDGELRRSQKLVELPELKNASNLLSVVESWLRSETKREKKLVAASP-QFKKA-SAFDNSP 174
           Q+G+LR+ +KL EL ELK ++NLLSVVESWLRSETK EKK     P Q ++  S FD+SP
Sbjct: 221 QEGDLRKIEKLSELDELKTSANLLSVVESWLRSETKCEKKKPINPPAQIQRTPSPFDSSP 280

Query: 175 FRSSRHMAYYR 207
           FRSSRHMAYYR
Sbjct: 281 FRSSRHMAYYR 291


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